fgf21 (LOC107561365,LOC107551145,LOC107729479,LOC107687650)


Basic Information

Item Value
gene id fgf21
gene name LOC107561365,LOC107551145,LOC107729479,LOC107687650
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 10842633 ~ 10845916 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229824.1
CATTAATACCGGTGGGCGAACGAAATCCCTTCATGCACGCAGAGTCAAAATTTCCCCCCGCAATGATGAGACAAAGACATCAAAACACTTAATCCGCTCAaagaagagcgagagagaaagcaaaGGATGGGAGGGAGCAGCAGATGGCCAGAAAGACGTCAATCCTGCTCATTCTTCCCGGGACAAAAACGAGGCAAGAGACAGATGATTACAAGGGACACTGACGTAATTGTGGGGACCCTGGACGTCACAGAGGCGCTTAAAGGAGCTGTATTAAGATGACTACTGGAGGAATGAGGTGATTCTTTAGCGATTGATAAAAGACATCGGCCAAACAGTTGATGGAGTCCAGCTGTTTAATTACACCTCAGGCTTTATAGTCTTTAATCATTCACAGGGAACTAACAATTATTGACAGACCCGGGTTGGCGTGTTCCTGCTAACTTTTGTTCAGATAAGACATGCACACTTgaactttttcattaaaaagtttcACCACACTGCCCTCTCTAGCTGACGGGACGGTAGTGTCCTGCGTCCTCGCGTccagtcctgtcctgtcctaAGTGAGAATGCACAGGTGAGCACAAAACCCCCTTTAAGTGCTTTTATGACCTCTTATCTGTTCAGTTTAAACTGTCACATCCACTCCCATTTCCTCTTAATACTGGGAATTAACCAAAACCCTTTACACTAAATAAACAATGATCAATCTGCGATATGCAAACTTATATACTATATGTTTTCCTCTCGGGGCAGAAGTCGGGGGGTCCCCTGTCCTCTGAGATCAAAGGCATATGGCTGGCATAGCCATGTGAGATTTACCATCAGTTTATCCTCCTTCATTTCCTGAAAACAAGTTTGTTATCATTTTTCCTTTTCGTACTTGAATGACTCATGGAttctctgtcgctctctcaTGCGTACAGTATAAATACAAGTTTACGGGGACATGTCTTCTGTGTAGACCATCTTTGCATCTGGAGGTCTTGGAGACATCACCATTCaagttttttggattttttttttacataaactggAGTTAGCctcttagtttttatttatcgtTCACATTCAAGTCAGTTTTAAAGTTTATCATTggagatattttatttttgagcgtatttttacttttggagACCATCCATTTGTGTTGATGGCCACCTGCTCGGCTCTCTCAATCATGCTTTTTAcccgttttttctttttttttgctctgtttcCTCCTCTTCGTTGGTGTATGTATGTTCCTGTACAGAACGTGCTTCTGCCGTTTAGCACGCAAGTCAGGGAACGCTTGCTCTACACAGATAACAGAAGGCACGGGATGTTCCTTGAAATCAAACCTGACGGCTCCGTTAAAGGGTCTCCTGAAAAGAACCGCAGCTGTGTGATGAAGCTGCTTTCAGTGAAAGCGGGCGAGACGGTCATCCAGAGCGTGGCTACATCTCTCTTCCTCTGCGTGGATGATAAAGACAACTTGAAAGGACAGccaCATTACACTGAAGGAGACTGTACCTTTCAGGAATTGCTGATGGCAGATGGAtattctttcttcctttctccaCACACTAAGGGTCCTGTGTCGCTACTCTCTGGGCAGAAACACGGTGCTCCACTTTATCGGTTCCTTCCTGTTATGAATACTCAGTTGGCAATGGTGGGGAAAGGAGAGGACAGCCAGATTCCGGAGCTGAAACAGTATATTAAAGACATAAACCTGGACTCTGACGACCTACTAGGAATTGGTCAGTCACATATTCAGACTGTCTTCAGTCCCAGTCTGCATACTAGGAAATGAGGACTGGAGGACATTCTTTATGGAGGCATGCTTTACATTATCACTGGActgcaaagtttaaaatgttttgttactgtATTTGTCTTTGcgtaaaactgtatttatttgaatttatttatttatttgctatggtctacaattatttaa

Function

NR:

description
fibroblast growth factor 21

GO:

id name namespace
GO:0030098 lymphocyte differentiation biological_process
GO:0030099 myeloid cell differentiation biological_process
GO:0008083 growth factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229824.1 True 1948 mRNA 0.43 4 10842633 10845916

Neighbor

gene id symbol gene type direction distance location
bcat2 bcat2,LOC107687634,LOC107729480,LOC107680854,LOC107561362 coding downstream 8156 10822448 ~ 10834477 (-)
grna NA coding downstream 25393 10805061 ~ 10817240 (-)
rundc1 LOC107729555,LOC107551167,LOC107687639,LOC107680882,LOC107561358 coding downstream 38801 10798013 ~ 10803832 (-)
rpl27 rpl27,LOC107551168 coding downstream 45361 10794230 ~ 10797272 (-)
slc25a39 LOC107729547,LOC107687641,LOC107551169,LOC107680864,LOC107561357 coding downstream 49841 10783232 ~ 10792792 (-)
slc1a9 slc1a9,LOC107729473,LOC107551162,LOC107680867,LOC108434930 coding upstream 1552 10847468 ~ 10865872 (-)
ppfia3 ppfia3,LOC107551161,LOC107563979,LOC107732887,LOC107729434 coding upstream 39782 10885698 ~ 10920560 (-)
nucb1 nucb1,LOC107687629,LOC107729549,LOC107732899,LOC107563981,LOC107680880 coding upstream 80243 10926159 ~ 10931641 (-)
ccndx si:ch211-152f23.5,LOC107687630,LOC107551158,LOC107732861,LOC107680849,LOC107563982,LOC107729433 coding upstream 86582 10932498 ~ 10935994 (-)
tbc1d17 tbc1d17,LOC107551157,LOC107687627,LOC107729504,LOC107680857,LOC107732891,LOC107563983 coding upstream 94288 10940204 ~ 10947278 (-)
G19019 LOC107561356,LOC107680886,LOC107732897,LOC107551139,LOC107729558,LOC108434911,LOC107687643 non-coding downstream 73235 10767300 ~ 10769398 (-)
G18795 LOC107732905,LOC107729518,LOC107551141,LOC107551149,LOC107690331,LOC107680850,LOC107561346 non-coding downstream 145094 10689164 ~ 10697539 (-)
LOC122334019 NA non-coding downstream 147129 10689419 ~ 10695504 (-)
G18771 NA non-coding downstream 164053 10677457 ~ 10678580 (-)
G18745 NA non-coding downstream 263493 10574167 ~ 10579140 (-)
G19108 NA non-coding upstream 487840 11333756 ~ 11335800 (-)
G19117 NA non-coding upstream 564419 11410335 ~ 11410716 (-)
G19375 NA non-coding upstream 923806 11769722 ~ 11771648 (-)
G19381 NA non-coding upstream 998098 11844014 ~ 11844199 (-)
G19385 NA non-coding upstream 1021091 11867007 ~ 11871906 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other downstream 446292 10394314 ~ 10396341 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other downstream 632017 9993833 ~ 10210616 (-)
G18433 LOC107670519,LOC107563315 other downstream 1379728 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 1704544 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 1835190 8992714 ~ 9007443 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 166020 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 566069 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 848356 11694272 ~ 11714719 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other upstream 866904 11712820 ~ 11728001 (-)
G19383 NA other upstream 1007832 11853748 ~ 11880959 (-)

Expression


Co-expression Network