XLOC_006841 (CT027676.1)


Basic Information

Item Value
gene id XLOC_006841
gene name CT027676.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 38084077 ~ 38088627 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013160
TCTTACAGACTCCTACGTGCCTGCTTTACAGATCAAAAGTGGCAGTTCAAAGATCCAGCAAAGCTCCCGACTGAACAAAGACATCAAGCGGATAAATAAAGAACCAGTCGAGCCAAGACAAACATGAGAAACCCAAAGCTAGCTATCATTGTCTTCCTGCTCAGCTGTGTAATATATGGCCCTGTGTACAGCCAGGTAACCTGCCGCAGAGCCACGTCTCGTGAATGGCACACTCAGCCAAAGAACATCAGCGTGAGGTGGACCCTCATGGAGAACACCTGCAGCAGTTTGACCCAGTGCTGGAGCAGCTTTGCAGAAACAAATGGACACTTCTGGACAACTGGGCCATATCACTTTCCTCAACTTTGCCCTTTGGAACTTCAACTTGGAGACCTCTTGTTTGTTTCTGCCGACGGAACGCTTGAACAACACGGTgtccaactaatcaaggtttCTAAAGAGGAGTTTGATAAGTGCGCGATTTTAGAGCCCCGAAAGGAGCAGTTGGTATTTGCCAGCAGTATAAATGGTACTTTGCAAGTGGAATCAAAGTGGCTGATGTCTGGTTTGAATTACTTTACGATCATTAATAGAGGGAGTAGTCATCTGTGCAGGTTTGGCCTACGCATTGCAGTTCTGGTCAAGCCTCAGCTCTGCCAGAGCTCACCTCTCCTTCGGCTGTGTTCGGGAAAAGGAGAATGCAGAACTACGCTTAAAGATGATTCATTTACCTGTCGGTGTCACAAACACTTTTCAGGACGTTACTGCGAGAACGTTGACGGATGCTATGAGCAGCCATGCTTAAATGGAGGCACCTGCCTGAGTGAGGGAAGTGCCTACACAGATCTTCCACCGTACACATGTCTTTGTCCTGCTCCATTCACAGGTGTCAACTGCTCTGAAATCATTGGAAATCAAAACTGCAGCAAATGGTGCAAAGAAGGAGCTTGCTTAAAAGTCTCATCAACTTCTTACAGATGTGAATGTTTCACCGGATATACAGGCAAGTACTAAATGAACACTTCCCACATAGCGAAATgtttc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000106564

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013160 True 1044 mRNA 0.46 2 38084077 38088627

Neighbor

gene id symbol gene type direction distance location
XLOC_006840 eys coding downstream 44206 37992158 ~ 38039871 (-)
XLOC_006839 si:dkey-188i13.11 coding downstream 427387 37650673 ~ 37656690 (-)
XLOC_006838 si:dkey-188i13.10 coding downstream 434482 37645572 ~ 37649595 (-)
XLOC_006837 si:dkey-188i13.9 coding downstream 441176 37638758 ~ 37642901 (-)
XLOC_006836 NA coding downstream 447479 37632626 ~ 37636598 (-)
XLOC_006842 NA coding upstream 101894 38190521 ~ 38195214 (-)
XLOC_006843 NA coding upstream 524598 38613225 ~ 38619719 (-)
XLOC_006844 lmbrd1 coding upstream 532890 38621517 ~ 38792061 (-)
XLOC_006845 BX323574.2 coding upstream 709418 38798045 ~ 38870801 (-)
XLOC_006846 BX323574.1 coding upstream 764510 38853137 ~ 38853252 (-)
XLOC_006471 BX537274.2 misc downstream 27819172 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 37257852 825904 ~ 826225 (-)
XLOC_006829 NA non-coding downstream 548292 37528161 ~ 37535785 (-)
XLOC_006819 AL845493.1 non-coding downstream 905361 37178602 ~ 37178716 (-)
XLOC_006817 NA non-coding downstream 973541 37110212 ~ 37110536 (-)
XLOC_006815 NA non-coding downstream 1071841 37009812 ~ 37012236 (-)
XLOC_006848 BX324188.2 non-coding upstream 1153928 39242555 ~ 39242672 (-)
XLOC_006850 NA non-coding upstream 1410965 39499592 ~ 39504493 (-)

Expression


Co-expression Network