LOC122332643 (LOC107670450,LOC107672442,LOC107711182,LOC107757351,LOC107567228)


Basic Information

Item Value
gene id LOC122332643
gene name LOC107670450,LOC107672442,LOC107711182,LOC107757351,LOC107567228
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9084364 ~ 9089675 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043230019.1
TGACTACAGTTCCCAAGAACCATTGCGGCGACATGAAAGTGGGCGTGGCATGTTTGACACTGCGCGCGGTCTTTGAAAGAAAATGGCGGAGCTTCAGAGTGAAGAGATGGAGccGTGTGATGCCAACAACATCAATACCAGGGCCTCAGAAGTGTCTCATGGAGTCAAACGGCCGCTTGACAGTAGCCACATCTCAGGACCTCCTCAGAAGTCACCTTGCACGTCTCCCGCTCCCGCAGCGATGCAGCATATCGGAGAGGATGAGCGCCGGGAGGACTCTAAGATGAGCTCTGTTGAGGAGAGTGTGAGGGAAGGTGTGACAGCTACTGCTCCAGAACGAAGCCCTCGCTCACGGAGGAAATCCTGGAGGAGATCGTCCAGAGGCAGACGCTCTCTGCCGGCCTTCTCCTGCTCCTCACAGCCTCTGTGTGAAACCATCAGTCTGTCTTTGCCTGATAATGAGAGGCTGGAGATGCTAATTAAAGCTGCTATGCAGATGACAGTGAAGAGGGCCAAAAATAGTCTGTACACTGTTCCCGGTGTTGATACAGAGATACTCCAGACTCAAGTTGAATCTTTGCATGAAGAATGGGACAGTCTGGCTAAAGACATCAAAAGAGAAACCCAGGCTTCACTTTCAGCCGTTGAGAGTGACCCTGTTGTTAACATGAACGCTGCGCTCATTCAGGAGGACATTAACAGGTTACAGGCAGAAAGTATGTCGTGGGAGTCGCTTTTGAACAAACATAGAATCAAAGCTGACGAGCTAGACAAATGTGTGGAGCGAGGGGAAGAGAAGGGGGTGCCGCTGGACCCGTCGTGCTTTGCAAAGTCCTCACAGAGTCAGCTCATTATGAACAAACCTGACTACAATGCGGTACTCGCGGGACAGCAAAAGCTGCTCAGAAACATGGAGCTAGTGATGGACTCACAGTGTTGTATAATGAGGGAGCTGCTGTCTTTTCATGAGAAGTCACAGCTGCTGCTAAAAGAGACCAGTGCCAGACTAGCTGCCAGGGCAGGATTTCAGAATCTCCCTTCATCTCCAGtcagacagctgataaaaggACCCATATCTAGCGTTTCCTCCTAGTTTACAGTGCCGTAATGAATCCCATAGGATGCTGAGCTTCCACACAAAAGCCCTACGATCTGATAGGACCATTGCGGTTATGCATTATGTTTCGTTTCAACTTTTAGCTGTATCGCAACAcgtatcctttttttttttttttttttttttttttaaagagcatcTAAATTCATACTAAACCTCTGTATGTCTGTTTTGGATTTAGTCCATTTAAATGCTCCGAATGCGTACATGAAGCGCAAAGATGAACACTAGATGGCAGGCTAGTTATTCACCTAGTTCTTCAAAGCTCCACTTTAACCTGTGTAGTTTTGCATAGATTTTGTTTCTCTCAATTTGAcagatttctaaatataattaaatgcctTGACAATTGCTTCAaa
>XM_043230027.1
acgtAGCGAATGTATGTGTTAAATGTTTCCCATTGACATTTGAAGATGATGATTTCTGAATTAAGAAGATTTTTGGCTTGTTACTGGACCAACACAGATGTTCAAActgttgtttaaaatacattgcaGTGTGATGCCAACAACATCAATACCAGGGCCTCAGAAGTGTCTCATGGAGTCAAACGGCCGCTTGACAGTAGCCACATCTCAGGACCTCCTCAGAAGTCACCTTGCACGTCTCCCGCTCCCGCAGCGATGCAGCATATCGGAGAGGATGAGCGCCGGGAGGACTCTAAGATGAGCTCTGTTGAGGAGAGTGTGAGGGAAGGTGTGACAGCTACTGCTCCAGAACGAAGCCCTCGCTCACGGAGGAAATCCTGGAGGAGATCGTCCAGAGGCAGACGCTCTCTGCCGGCCTTCTCCTGCTCCTCACAGCCTCTGTGTGAAACCATCAGTCTGTCTTTGCCTGATAATGAGAGGCTGGAGATGCTAATTAAAGCTGCTATGCAGATGACAGTGAAGAGGGCCAAAAATAGTCTGTACACTGTTCCCGGTGTTGATACAGAGATACTCCAGACTCAAGTTGAATCTTTGCATGAAGAATGGGACAGTCTGGCTAAAGACATCAAAAGAGAAACCCAGGCTTCACTTTCAGCCGTTGAGAGTGACCCTGTTGTTAACATGAACGCTGCGCTCATTCAGGAGGACATTAACAGGTTACAGGCAGAAAGTATGTCGTGGGAGTCGCTTTTGAACAAACATAGAATCAAAGCTGACGAGCTAGACAAATGTGTGGAGCGAGGGGAAGAGAAGGGGGTGCCGCTGGACCCGTCGTGCTTTGCAAAGTCCTCACAGAGTCAGCTCATTATGAACAAACCTGACTACAATGCGGTACTCGCGGGACAGCAAAAGCTGCTCAGAAACATGGAGCTAGTGATGGACTCACAGTGTTGTATAATGAGGGAGCTGCTGTCTTTTCATGAGAAGTCACAGCTGCTGCTAAAAGAGACCAGTGCCAGACTAGCTGCCAGGGCAGGATTTCAGAATCTCCCTTCATCTCCAGtcagacagctgataaaaggACCCATATCTAGCGTTTCCTCCTAGTTTACAGTGCCGTAATGAATCCCATAGGATGCTGAGCTTCCACACAAAAGCCCTACGATCTGATAGGACCATTGCGGTTATGCATTATGTTTCGTTTCAACTTTTAGCTGTATCGCAACAcgtatcctttttttttttttttttttttttttttaaagagcatcTAAATTCATACTAAACCTCTGTATGTCTGTTTTGGATTTAGTCCATTTAAATGCTCCGAATGCGTACATGAAGCGCAAAGATGAACACTAGATGGCAGGCTAGTTATTCACCTAGTTCTTCAAAGCTCCACTTTAACCTGTGTAGTTTTGCATAGATTTTGTTTCTCTCAATTTGAcagatttctaaatataattaaatgcctTGACAATTGCTTCAaa

Function

NR:

description
PREDICTED: kinetochore-associated protein DSN1 homolog isoform X2

GO: NA

KEGG:

id description
K11544 DSN1; kinetochore-associated protein DSN1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043230019.1 False 1476 mRNA 0.47 11 9084364 9089675
XM_043230027.1 True 1490 mRNA 0.45 11 9084507 9089675

Neighbor

gene id symbol gene type direction distance location
atp13a1 atp13a1,LOC107711248,LOC107672485,LOC107757369,LOC107670516 coding upstream 889 9067646 ~ 9083475 (+)
lmx1al lmx1al,LOC107672514,LOC107670451,LOC108429662,LOC108256788,LOC107567229 coding upstream 20217 9043438 ~ 9064147 (+)
LOC122341294 gmip,LOC107672475,LOC107670530,LOC107587992,LOC107711163,LOC107757342 coding upstream 42831 9024378 ~ 9041533 (+)
colgalt1a colgalt1,LOC107672476,LOC107757371,LOC107711180,LOC107670492,LOC107567242,LOC108429625,LOC108257422 coding upstream 62718 9013095 ~ 9021646 (+)
LOC122333359 hs3st4,LOC107703335,LOC107568293,LOC107741793,LOC106601107,LOC105013403,LOC106607349 coding upstream 104488 8976324 ~ 8979876 (+)
pbx4 pbx4,LOC103392870,LOC102788435 coding downstream 4140 9093815 ~ 9127734 (+)
stxbp2 stxbp2,LOC107711254,LOC107587946,LOC107672507,LOC107670524,LOC107757364,LOC107563326 coding downstream 99461 9189136 ~ 9199702 (+)
LOC122341842 LOC107588008 coding downstream 113156 9202831 ~ 9206354 (+)
xab2 xab2,LOC107672506,LOC107670481 coding downstream 116979 9206654 ~ 9212934 (+)
camsap3 LOC107711256,LOC107672468,LOC107587945,LOC107670479,LOC107757361 coding downstream 124569 9214244 ~ 9245657 (+)
G18261 hs3st2,LOC107550309,LOC107703334,LOC107741797,LOC107574133,LOC107674621 non-coding upstream 202242 8881198 ~ 8882122 (+)
G18092 NA non-coding upstream 408478 8671661 ~ 8675886 (+)
G18055 NA non-coding upstream 593947 8474293 ~ 8490417 (+)
LOC122331402 NA non-coding upstream 769874 8312389 ~ 8314490 (+)
G18025 fam234b,LOC107576065 non-coding upstream 867333 8216524 ~ 8217031 (+)
G18303 NA non-coding downstream 160424 9250099 ~ 9250630 (+)
G18305 NA non-coding downstream 172295 9261970 ~ 9262239 (+)
G18425 LOC105357980 non-coding downstream 323969 9413644 ~ 9414007 (+)
G18429 NA non-coding downstream 394760 9484435 ~ 9484736 (+)
G18443 NA non-coding downstream 452025 9541700 ~ 9543366 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 72186 9010050 ~ 9012178 (+)
LOC122341292 LOC107729471,LOC107687638 other upstream 95554 8980591 ~ 8988810 (+)
G18048 NA other upstream 342062 8513349 ~ 8742302 (+)
LOC122342110 wbp11,LOC107751605,LOC107678993 other upstream 520985 8260084 ~ 8563379 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other downstream 48792 9138467 ~ 9183290 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other downstream 94724 9184399 ~ 9185660 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other downstream 603274 9692949 ~ 9697915 (+)
G18491 NA other downstream 650121 9739796 ~ 9749880 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 709140 9798815 ~ 9799796 (+)

Expression


Co-expression Network