LOC122332730


Basic Information

Item Value
gene id LOC122332730
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1372532 ~ 1374290 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043230100.1
ATGATTGTTGAATCGAAGggaagttttgatatatatcCTCCAGACTTGTCCTCTATAAGGATAGTTTTGGTAGGAAGGACTGGAGCAGGTAAAAGCTCCTCGGGAAACACCATCCTGGGCAGAAAAGCCTTCAGAGCTGCGGTCAGTGGTCTGTCTGTAACCAAAGAGTGCTGGAAACAGACTGAACGGGTGGCTGGGAGAGAAATTGCTGTGGTAGATACTCCGGGTTTGTTCGACACAGATACTCCAGAGGATCTTCTGAAAGAAAAGATcagtaaatgtataaacatgACTGCACCTGGACCTCACGCCATCATCCTGGTCATTAAACTCGGTCCATTCACTGAAGAAGAGAGGCTCTCGGCGGAGAAGATCAGAGCCATATTTGGAGAAGAAGCAGATAAACACACATTCATCCTCTTTACCGGCGGTGATGAACTGAGTAACAGCTCTATTGAAGAATACCTCGGTGAAGCCAGTGAGGATCTCAAAGAAATCTTGTATCGCTGTGGGGGTAGATATCATGTCTTCAATAATAAACAGATGGAGAATCGTAATCAAGTCACAGAGTTCCTGGACAAAGTGGATGAAATGGTCACAGCTAATGGAGGTGGATTTTACACCAGTGACCATTACCATGACGTAGAGCTCGTCCTGGAGATGAAAGAGGAAGAGCTGAGACAAAAATATGAGAAGAAGCTGAAGGAGAAAGAGCTGGAGCTGGAGACCAGATTCAATGAAGAGAGGACAAAACTGCAGCAGAAAATTGAAGAATTGACGACATCAGAGCaggagaaagaagagaagaTCAAAGAGCTGGAGCGGCTGAATTTGAGGAACATGATCGAAATGACCGAATACAAGAGATACTACGAAGTAAAGCTCACAGAGGTCAGACTGGAGGCGGAACTCACCCGTCTTAACGAGAGGATTCTGATGGAGATCTTCAGCAAGTTACAAAGCCTTTCAATGTAAGCGGTGTTTTATTAGCAGTGCAAGTTCATG

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043230100.1 True 1005 mRNA 0.45 3 1372532 1374290

Neighbor

gene id symbol gene type direction distance location
LOC122329817 LOC100537134 coding upstream 137628 1230001 ~ 1234904 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding upstream 147615 1217521 ~ 1224917 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding upstream 174494 1188018 ~ 1198038 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding upstream 193191 1176232 ~ 1179341 (+)
LOC122329844 LOC107563756,LOC107731666 coding upstream 196461 1160237 ~ 1176071 (+)
LOC122329966 NA coding downstream 2159 1376449 ~ 1380026 (+)
LOC122330340 NA coding downstream 13194 1387484 ~ 1389699 (+)
LOC122330593 polr2f,LOC107727050 coding downstream 41327 1415617 ~ 1418312 (+)
LOC122330185 micall1,LOC107727039,LOC107674481,LOC107711806,LOC107563760 coding downstream 75948 1450238 ~ 1453084 (+)
LOC122329871 NA coding downstream 82660 1456950 ~ 1463253 (+)
LOC122330723 NA non-coding upstream 91361 1279263 ~ 1281171 (+)
G15929 NA non-coding upstream 131485 1240346 ~ 1241047 (+)
G15927 NA non-coding upstream 156927 1215316 ~ 1215605 (+)
G15925 NA non-coding upstream 158904 1213325 ~ 1213628 (+)
G15911 NA non-coding upstream 219304 1152825 ~ 1153228 (+)
LOC122330682 NA non-coding downstream 8958 1383248 ~ 1384894 (+)
G15967 NA non-coding downstream 39925 1414215 ~ 1415199 (+)
G15972 NA non-coding downstream 66969 1441259 ~ 1441742 (+)
G15944 NA non-coding downstream 111281 1485571 ~ 1490779 (+)
G16004 NA non-coding downstream 240870 1615160 ~ 1615529 (+)
G15939 NA other upstream 80968 1290969 ~ 1291564 (+)
LOC122330066 NA other upstream 321381 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 363101 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 596998 754430 ~ 775534 (+)
LOC122330407 NA other upstream 736293 625364 ~ 636239 (+)
G15955 NA other downstream 16449 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 21557 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 185097 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 245022 1619312 ~ 1865229 (+)
trnar-ccu plbd1,LOC107563730 other downstream 246633 1620923 ~ 1623394 (+)

Expression


Co-expression Network