LOC122332748


Basic Information

Item Value
gene id LOC122332748
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17381783 ~ 17384185 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043230135.1
GCCGCACCAAAACATGTCTCACACAGCAGACAACGTTGGTCACTGGGAAGACCTGGAAACATGGCTAAGTGTTGCAACCAGCAGCCTCCTACCCAAGGCCGCGGAAACACTAAAGCGTCAGACCCAGGAACAGCTGGATAACAACCTAACGAGCCTAATGGAACAGGACCCAAGCCAAGGCTACAACCACAAAGAGCTAGCAAAGATCACCTGCTCCCTAAGTCACACCCTCATCGCTACCCTCAAACTGAGTGACAGGCACGCCGCCGATCTCCAACAGGAGCTGACATGCGCACAGCGACGCATCAAACAGCTGGAACTGGAGGCTCAGGAACTACAGGAAAAGCTGGATGAGGAGAGAAAGGACCCAGAGGAGATTACCACGCTCAAAGCCTTGCTAGCAGCTTCCACACAAGaggtgaaacaaaccaaaagagacTTTGACAATGCTGCCAACAACCTCCAGTACGCAGAACAGCTACTGGAGAAGGCAAAGACTGACCTTAGAGACAAGGCCGGCAGAATCAAAGCCCTCGAAACTCACTTGAACGAGTCAAGGAATGAGGTCAACCGCCTAGAACAACAGCTGGACTACGTCAAAGAGGAATCTGACTGTGTCAAGGAGGAACTCAGACACGCCTACGACCTGCGCGCTGAGCCACCGAGGACACGAGAGGCACCAACGTCACCCCTGCCAACCAGCCAAAGAGCATCACACGGCCTGGACCTAAAAGATCTCGACAAGATCGCCAGGAACATCGTCAAGTTCACCCCAGGTGTGCCAAGTAGTCCAGACATTCAAACCTATCTACAGGACGTCGAATTCCATCTGGAAGTAAGACCTCACGTCACTGATAAAGATAGACTCTATTTACTGCGAGCAACATCCAGCCCTGATGTACGCAGCTTCCTGGCGCAACCAGCCCAGACAAAGGCTGATTACCACCTGCTCCGAGAGGCTCTCATCAATGAATTTGATGACCCAGAGTCAGAACAAGGACTAGTAGCCGCCCTGGAGATCAGACAAGGCCGTCATGAGTCTCCGCAAGCCTACTACAGCCGACTCAGGAGAGCATACTTCGGAACTCGCAACGAGCCCGAAATGGAACAGGACATGAACTTTAAGACTCTCTTCCTCAGGAACCTACATCCTGGGGTAAGCCACCATCTAGGCGTGCTTGCATGTTCGCGCACAATGACCATTCAGCAGCTGCGCGACTTGGCACACAAAGCCTACAGCAAACAAAAGATGGCTGCAGAGAAAGGCACTAAAGCTCCGACAGTCCTCGACTTCAACACACAAAGTCACGGACTGCCTCTAGAGGGTGCCCAACATCAAGACAGCTTCAAGCCGTCAAGAAAAGAGTGGAACGTGTCCAACCGAGAGCAAGACTTCCACGCAGGTACCAGACCCAATCAGAGAAACGGCCGCTGGGATGGACCACGTGAACGACAGCGCCGCGCCTGGACGCCACTGGGAAAATGGGAGAGATCGTGGAATCAGTCAACCTCCTTTAGAAACCAAAGGGGGAAGAGCTCCTGGGATGGCAACGGAACCTCCATGggtagagcacaaacacaccctgGAGCAACCAGCCCAAGGACTCGACGAAAGAACTTTCAAACTGAATCCACACAAGAGCAAAAGACATCACCGTTTTTTTACTCACAAGAACTGATGAAGAGCATGATGAGAGAGTTTTTCCAGCAAATGAAGGAAGATTGGAagtgggaaaagaaagagaagccgGATTCAGCCTGACTGGCAGCCGGACGAGACAGCAGCGACCACCCGACCCAACCAGACACAGAGAATAGCACTTCCTCCCCGCACACTCAAAGAACCATAATGACCATAACTTCAGATGGACGAGAAATCCTACCTGAAACCCCAGCAATCGAGTTAGCCCCTAACTCACCATATGATGCTTCAAACCACGGCATCATCCAACAAACACCTGCCGCTGAAACCACTCTGGTTCCTGAAAGTGCTGTCCTGGTCGTCTGCCACTCGTCCGAAGAACTGCAGATTAGCCCTGATATCCTCCCCATCTCATCCCAAACTCCAGTCCCTCAACTCCTGGGTGATCTCATTGAGAGAGGTATAGCAAGAAAGTTTTACCTCTCCGTCATCATCGAACGCCACATCAGGGTCGAAGCCCTTCTGGACACAGGAGCTGACATCACACTAATGTCAGCAGAACTCCTCGGAAAAATCCAGGAAGgagcaaagacattaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043230135.1 True 2242 mRNA 0.52 4 17381783 17384185

Neighbor

gene id symbol gene type direction distance location
LOC122341850 LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC108433148,LOC105013234 coding upstream 283818 17089814 ~ 17097965 (+)
litaf litaf,LOC107727125,LOC107703380,LOC107674718 coding upstream 336491 17043049 ~ 17045292 (+)
zc3h7a zc3h7a,LOC107727124,LOC107564690,LOC107674666,LOC107703382 coding upstream 344296 17024634 ~ 17037487 (+)
trnat-cgu_1 NA coding upstream 375798 17005914 ~ 17005985 (+)
LOC122341973 NA coding upstream 446264 16934133 ~ 16935519 (+)
hs3st2 hs3st2,LOC107741797,LOC107550309,LOC107574133,LOC107703334,LOC107674621,LOC108433116 coding downstream 39103 17423288 ~ 17449492 (+)
ube2ia ube2i,ube2ia,LOC105013396 coding downstream 182078 17566263 ~ 17570451 (+)
baiap3 baiap3,LOC107719179,LOC107550313,LOC107703313,LOC107674731,LOC107565767,LOC107749910 coding downstream 194555 17578740 ~ 17622221 (+)
gpr146 LOC107565765,LOC107710650,LOC107674685,LOC107703371,LOC107550312,LOC107719180 coding downstream 274249 17658434 ~ 17668692 (+)
gper1 LOC107703333,LOC107710646,LOC107579847,LOC107719188,LOC107565760,LOC107674622 coding downstream 295090 17679275 ~ 17685695 (+)
G20803 NA non-coding upstream 273089 17107992 ~ 17108694 (+)
G20831 NA non-coding upstream 305609 17075788 ~ 17076174 (+)
G20830 NA non-coding upstream 306208 17075353 ~ 17075575 (+)
G20829 NA non-coding upstream 306959 17074622 ~ 17074824 (+)
G20801 NA non-coding upstream 318960 17057704 ~ 17062823 (+)
G20908 usp31,LOC107703377,LOC107550315,LOC107674671 non-coding downstream 119711 17503896 ~ 17516429 (+)
G20915 LOC107550314,LOC107703374,LOC107719177,LOC107565769,LOC107741796 non-coding downstream 169189 17553374 ~ 17563364 (+)
G20927 NA non-coding downstream 187945 17572130 ~ 17572473 (+)
G20953 NA non-coding downstream 266582 17650767 ~ 17651301 (+)
G20951 h3f3b,H3F3A,LOC105909691,LOC101073377,LOC107388308,LOC102790198,LOC107572204,LOC106578873 non-coding downstream 305230 17689415 ~ 17690288 (+)
LOC122341316 NA other upstream 181153 17137930 ~ 17200630 (+)
nsmce1 nsmce1 other upstream 264742 17113048 ~ 17117041 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other upstream 596972 16770545 ~ 16784811 (+)
LOC122331507 psmg3,LOC107703392 other upstream 682301 16690703 ~ 16699482 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other upstream 1173937 16179620 ~ 16207846 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other downstream 334997 17719182 ~ 17723423 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other downstream 485992 17870177 ~ 17901491 (+)
polr3k polr3k,LOC107703329 other downstream 520399 17904584 ~ 17906643 (+)
si:ch211-66e2.5 si:ch211-66e2.5,LOC107572173,LOC107703361,LOC107596817,LOC107754045,LOC107735828,LOC107674574 other downstream 536732 17920917 ~ 17929634 (+)
LOC122341796 pde6g,LOC107690252,LOC107733865,LOC107685924,LOC107590586 other downstream 689890 18074075 ~ 18075616 (+)

Expression


Co-expression Network