LOC122332958


Basic Information

Item Value
gene id LOC122332958
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1728370 ~ 1729997 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043230436.1
GCTTGTCATAGCTACAAAGACCTGGTTTTTCAGACTtgcaacacacaaaaatgtttcacGAATCAAGACTCATTGATCCTGAAGACCTGCGGAGAGAATTGACCCACTATGATCCTGAAGAACTAAGAGCAACTGTAGGCTCTGAGACTGAAAACCAAGAATCAAGGCGACATGAACATGAAAgTAACCCTGAAATAATTTATAGCACGCAGGTGCTTAAAAGACCATTTGAAGCAGATTTGACCGTTAAAAGTGACGTGTTTAGGAGCGCTCAAAGAGAGAAATTATACAAACCGGAAACATGGGAAATCCAAAAGGACATTGTAAAAAAGCCAAGCATGGAACTTGCATCAGCTAAATTTAGCACATGCCACATTACAAACACCATAAACGTGATTGACAACATTGACAGGCCAGCAGAAGCCTTTACAAAAGCCGTTTATGCTCAAAGTGAAGCATATGCGGATAAACCAAAAACGCACCGGAAAGAGGATCCCCAAAGCTGGAAAGCCAGAGGCCCCAACGCCAGAGCTAGTGCTGAAGCTAATATCATTTCAGCCGCAGCAATGGCTCGAGCCGAAATTGCTAGTGCATCAGCTCAAGCGGGTCCAGTTGGTGTAAAAGTGGGACTGGGGGTTGACACGGGAGCATCTCTCAGTCTGATAGACGGGCTGGAGTTAAAGGTCCTGGGAACTGGATTCACATTTGGTCCGAGAACCAGCGTGTCTTTTCTGGGTTCGGAGCTGTCATGTTCAGTCATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043230436.1 True 764 mRNA 0.45 5 1728370 1729997

Neighbor

gene id symbol gene type direction distance location
LOC122329718 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 677 1711295 ~ 1727693 (+)
LOC122330144 tob2,LOC107572283,LOC107691089,LOC107745517,LOC107734722,LOC107672913,LOC107563731 coding upstream 27707 1693056 ~ 1700663 (+)
LOC122330255 pmm1,LOC107672914,LOC107691086,LOC100007686 coding upstream 41393 1680314 ~ 1686977 (+)
LOC122330554 NA coding upstream 64772 1660521 ~ 1663598 (+)
LOC122329650 NA coding upstream 126716 1590678 ~ 1601654 (+)
LOC122330213 plbd1,LOC107563730,LOC107572281,LOC107672894 coding downstream 137627 1867624 ~ 1870610 (+)
LOC122333258 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding downstream 195750 1925747 ~ 1941793 (+)
rangap1a rangap1,rangap1a,LOC107745514,LOC107722837 coding downstream 272682 2002679 ~ 2010431 (+)
si:ch211-106h11.3 LOC107691099,LOC107708266,LOC107755605,LOC107563746,LOC107672933,LOC107574113 coding downstream 401221 2131218 ~ 2140821 (+)
LOC122341668 LOC107755616,LOC107672923 coding downstream 531613 2261610 ~ 2267508 (+)
G16008 NA non-coding upstream 23694 1689042 ~ 1704676 (+)
G16004 NA non-coding upstream 112841 1615160 ~ 1615529 (+)
G15944 NA non-coding upstream 237591 1485571 ~ 1490779 (+)
G15972 NA non-coding upstream 286628 1441259 ~ 1441742 (+)
G15967 NA non-coding upstream 313171 1414215 ~ 1415199 (+)
G16027 LOC107691092,LOC107572810,LOC107722836 non-coding downstream 40760 1770757 ~ 1979709 (+)
G16028 NA non-coding downstream 46989 1776986 ~ 1989269 (+)
LOC122330751 NA non-coding downstream 94793 1824790 ~ 1826317 (+)
G16033 NA non-coding downstream 124898 1854895 ~ 1855684 (+)
G16017 NA non-coding downstream 141283 1871280 ~ 1891027 (+)
trnar-ccu_1 NA other upstream 77642 1650656 ~ 1650728 (+)
G16003 pick1,LOC107734822,LOC106607154 other upstream 78876 1559387 ~ 1649494 (+)
trnar-ccu plbd1,LOC107563730 other upstream 104976 1620923 ~ 1623394 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other upstream 319444 1395847 ~ 1408926 (+)
G15955 NA other upstream 335520 1390739 ~ 1392850 (+)
trnar-ccu_2 NA other downstream 135716 1865713 ~ 1865785 (+)
G16222 LOC107751969,LOC107745511,LOC107572814,LOC107672897 other downstream 294351 2024348 ~ 2320138 (+)
G16223 txn2,LOC107745512 other downstream 382040 2112037 ~ 2114339 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other downstream 430349 2160346 ~ 2165693 (+)
G16347 NA other downstream 838087 2568084 ~ 2568999 (+)

Expression


Co-expression Network