LOC122333418


Basic Information

Item Value
gene id LOC122333418
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2579542 ~ 2584978 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043231017.1
attcatttcttttgttgtGTCTATTTCAAAGTCGACGAAATCATATCGAGAAAGAGAATTAAAGAAAAGCAATGGggaaataaatgcacaatatcttcatatattacaaaatgaataGCGTATTTGCTAACAGACAACAGGATTAGCGGTGTCTGAAGATAGCCTTTTTGCTTTCTTCGGGAGGCTTTCTGAGGCTAAAAGTTAAACTATAACGTGTCTTTTGATCACATTTCATCAAAACGCTCCTTGCTTTCACTCTTCCCCTTCCTAAAAACACCTGAAGCGAAAGTGAAGGCGAATACTTCACGCCACGTCTCGACGTCTTCACTTGCGGTAGAAAAGCAGTGCTTTGGGATTTGGCAAAAGTGGTGGGATTTTGTATTTCAACATGtctttacaaaaatgcatgtctGTGGCAGCGCTGTTTATGATCAGTGAAGggtTCTTAGTGACGGGTCCTTCCGGTCCTCTGGTTGTTCCTCTGGGATCTTCAGTGGTTCTGCCCTGTTATGTTGACGAACCCTTACCTTTGAAAGGACTGAAGGTGATTTGGGTTCGGACAGATGCCAATACTTTAGTGCACGTGTACCAAGATTATGAGAGCCGTCCAGAAGCCCAGTATCAGGATTATCGCGatagagtttgtttcttcactgaTGAAATGGAGCGTGGGAACTACTCCGTCCATCTGGATCACGTGAGAGCCGAAGATAAGGGCTTCTACAGATGCAAGGTTTACACCGAGCAGGAATCCGAGGAGACTCTGGTTGAAATTAAAGCGGTTgAGCATTTGAAGGTGTCAGGGTCTAATCATCCCGTGTCCGCGTCTGCGGGTGAGGACGTGACTCTGAACTGCTCTGTAGACTCTCACATCAGGCCGGAGGAGATCGACGAGGTTGCCTGGAGGAAAGCGGCTAAAAACGAAATCATCCAGGTTCTGGTTTTCGCGAAGAATGAAATGGTTCCTGCAGACGAGCGGTACAGAGACAGAGCTCACTTCTTCCCTGAGGAAATCCCCAAAGGCAACTTCTCTCTCAGGCTGAAGAGCGTCAGAACTGAGGATAAAGGGGTGTACGCGTGTcaggtgcatgctgggaactttTCAGCCAACGCGACTTCGGTACTGGAGCAACTGGgTTTCTCGGTTCTACACGGAGTTGTGTTGTTCCTCTGCATCGCTGCATCAGGATCTGCTCTGCTCCTGCTGTATCTAAACCGCACCGCACCAAACACAAACCTGTTTCTTCAGACGTCTGTTGGCTGTGTACCCaacctttttatgttttttgccTTTCTGTTCTGGGGTGTTATTGAAGGCTATCTGAGTGAGACTGTTGCCTGCTGCGCTCATTATTTTCTGAGGCCTCTTCTTCTGTTATGGACGGCCCCACATTCAGAACATTTCCCCGGTGATCGTGTAACAGCCATGCACTGCATGGTTCATCTGCAGTATTCCCTCTTTACCAATGTAGTTTATTCAGTTCTTTTCAAATCTTTTTGGGAAAAAAGTTTGAGGTATGAAGAATCCGACAGAGTCAAGATAACAGTCCTCTTTGGGATAATGATTCTCATATGCatcgtattattattatACCTGGTCTCTGATATCGGTCATGATGTTCTGCCTCCGTTACAACTCATCTTCCTCTTCTACGCTTTTGAAGCTGCTAGTGGAGGAGAACAGCGTGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043231017.1 True 1693 mRNA 0.46 10 2579542 2584978

Neighbor

gene id symbol gene type direction distance location
LOC122342193 NA coding upstream 14587 2564887 ~ 2564955 (+)
evplb evplb,LOC107741346,LOC107677338,LOC107567223,LOC107696334,LOC107751618 coding upstream 37004 2513221 ~ 2542538 (+)
atg4db LOC107677346,LOC107696340,LOC107751629,LOC107571953,LOC107741356 coding upstream 70436 2501588 ~ 2509106 (+)
LOC122341595 NA coding upstream 78526 2497983 ~ 2501016 (+)
mast1b mast1b,LOC107741348,LOC107677342,LOC107571949,LOC107696309,LOC107567212 coding upstream 104544 2449475 ~ 2474998 (+)
LOC122341564 LOC107569685,LOC107751621,LOC107696336,LOC107573174 coding downstream 24261 2609239 ~ 2615973 (+)
gga3b gga3,LOC107751623,LOC107677341,LOC107751620,LOC107696338,LOC107573175 coding downstream 32294 2617272 ~ 2627120 (+)
jpt1b hn1,LOC107696352,LOC107751437,LOC107677345,LOC107751632,LOC107565162,LOC107728178 coding downstream 62511 2647489 ~ 2658946 (+)
LOC122341575 LOC107678271,LOC107553656 coding downstream 684615 3269593 ~ 3272366 (+)
LOC122333469 LOC107576979,LOC107673194,LOC107716248 coding downstream 692191 3277169 ~ 3280555 (+)
G16344 NA non-coding upstream 13699 2564488 ~ 2565843 (+)
G16337 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311,LOC107571948 non-coding upstream 32639 2516512 ~ 2546903 (+)
G16327 LOC107741352,LOC107677336,LOC107567222,LOC107568146,LOC107696350 non-coding upstream 145030 2426408 ~ 2434512 (+)
G16227 NA non-coding upstream 205464 2314300 ~ 2374078 (+)
G16310 NA non-coding upstream 223471 2296867 ~ 2356071 (+)
G16358 NA non-coding downstream 16860 2601838 ~ 2602537 (+)
G16357 NA non-coding downstream 46817 2631795 ~ 2634380 (+)
G16484 LOC107755608,LOC107563769,LOC107755618,LOC107565149,LOC107695670,LOC107575431 non-coding downstream 75897 2660875 ~ 2667259 (+)
G16492 LOC107696342,LOC107565150,LOC107563773,LOC107565157,LOC107579404,LOC107565149,LOC107755607,LOC107755606 non-coding downstream 114302 2699280 ~ 2702201 (+)
G16529 NA non-coding downstream 691421 3276399 ~ 3276980 (+)
G16347 NA other upstream 10543 2568084 ~ 2568999 (+)
G16222 LOC107751969,LOC107745511,LOC107572814,LOC107672897 other upstream 259404 2024348 ~ 2320138 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other upstream 413849 2160346 ~ 2165693 (+)
G16223 txn2,LOC107745512 other upstream 465203 2112037 ~ 2114339 (+)
trnar-ccu_2 NA other upstream 713757 1865713 ~ 1865785 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 56168 2641146 ~ 2646756 (+)
G16530 LOC107601546 other downstream 698012 3282990 ~ 3283656 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other downstream 735842 3320820 ~ 3323054 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other downstream 925098 3510076 ~ 3526914 (+)
LOC122332297 NA other downstream 1224192 3809170 ~ 3813344 (+)

Expression


Co-expression Network