LOC122333458


Basic Information

Item Value
gene id LOC122333458
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 22365276 ~ 22371672 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043231079.1
TAACGCTACTTCACCACCGAACAGTCCTCAGGCAACTGGATGAGCGTCAATTTTAAGAGCGAGGTCTGGAGTCTCTGTCACTTCTCACGCGCTTCAAACAAAGCGTTTTATCCGTTCGCACGTGCTTCAGTAATATATCGGGCATTTGTCTCGTTTAGAGGAAAAACATCAATGTTTGCGGCTGGTTGTTGAGCTAGCCTACTTTCTGGAACGGGTTATTTCTTTTCTGTTATTGGCTacttttaaattcagttttgtttcttcGGGATTTATTTCCATGGCAAGAAGCGGAAgctattaatttgaataaaaaacgAATAACACAGTAGGACTACACTCCGAATATCAGATGACAGagatcgAATCCCATAATGGCTTGTAACAACTACTTACTGCTTAAAGTTTTCTTGATTTTACTTGGTACTGCACTGACCATTTGCTTCCTCCAGCTGGGGACCGTGGATTTCATGAAAACAGTGATAGAATTTGGGTACTCCAGaacCTCTCACCATATAATCTTCGTCAAACCAAAACTTGGACCTATTCTCAGCACAAATCGCTCATCGTGTTTCAGCGATGGTACATTTGCAAGACCAAAAATACCAGAAAAACTGCTGAAGGACATTATGAAACGCAGAGCAGAGGAGTACAGGCAATACCAGCTTaggatGGGGGACAACATGGACAAACTTCTTATTGCACCAGCCAACTCTCCTCTCCAATATCCAATCACAGGTTTCGTAGTATCTCCAATGGAAAAATCTCTAATACCAGGTCTTGCTCTTCAGACACAAAAGAGGGCGGTGTACAAGGTGTCTTTGAGCGTGAATAAAGGAGTGCTCTCAGTGAAGGATCTTCTGGATGGAGATCAGGTGGAGGGACAGGGTCAGAGTAATCTGACCATCTCATCCAGCAACATCACACATCTCAATGATCTTCTGTCCAGAGTGACCTACACCAGCACCATCTACCACATCAGGACATCAGACTTAAttcatttcacttttgaggACCATGAGGTCATGTTTCCCATCATGATTAGGAGACTAACGGTTCCTGTTCTGTATGACCCAGGAAAAGATGTCAACTCACAGGTGACCATAGTAACCAAGACATTTTTGAGGTATGATGAGCTGAATGTCCTCATCAAAAGTATCCGGATGTTTTACCCAGAGATCAAGATAATTATTGCAGATGACAGCCTGAAGCCTGAAAATATTACTGGAAACAATATTGAGCATTACATCATGCCTCCTGCACAGGGCTGGTTTGCAGGGAGGAATCTTGCAATATCACAAGTCACCACTAAATATTTCCTGTGGGTGGATGAtgactttgtatttttgaaagGAACCCGGATTGAGAGTTTTGTAGAGATTATGGAAGCGTTTCCAGAACTGGACATTCTTGGTGGTGCGGTATCAGGcaatcagttttatttcaaatttgagTATGAAGAGGGAGATGACGAGGAAGGAGGCTGCCTGACACgtattaaaaacagctttcatCAGCCACTTCCAAACACTGATGACTGCATCCTCGTAGATGGagttgtaaatttttttttgggtcGGACGGATTCAGTGAGAAGGGTCGGCTTTGATCCTTACCTGAAAAGAGTGGCTCATTCTGAGTTCTTCATGGATGGACTTGGACAACTGTTAATTGCCTCCTGTAAAGGCCTGTCCATTGGCCACCAAAAACATCGGACTCGAGGCAAATATGCTTACTTCAGACAACAGAAGAAAGTTGATGGGAGGAATAAAGTGCATCATCATTACTTTAAGAACTATTTGAAGTATATAAAGTTCTGACAGGCATTTGTCGTCCTCTCCCATTTagactttagtttttttgaagtattttgaagtgtttttgaCCATGAAAGGTATATTTTAGTGAGtgacttaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaataaataaatgtgaatgtgatCCCCAGACTAAGAAATATCTCTCTGTAAATTAGTTTTTGACTAACAATAATATCACAGTCTAAATGTCTGCTGAGGTTTGCAGTTTGTGAGATTTGTGTCTgtattgttaaatgaataatagaTGATATTCTGTTAGTGTTTCTAAAGAAGAGGCCAGTTGCTGATTGAATGCTTTTACTGGTAATACTTTGTAAACAgcattgaataaatatatatgtattattta

Function

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043231079.1 True 2226 mRNA 0.39 12 22365276 22371672

Neighbor

gene id symbol gene type direction distance location
LOC122332454 LOC107667744,LOC107582924 coding upstream 2874 22356954 ~ 22362402 (+)
nags LOC107585096,LOC107662425,LOC107740635,LOC102299446 coding upstream 8757 22349117 ~ 22356519 (+)
si:ch211-237i5.4 si:ch211-237i5.4,LOC107662436,LOC107711287,LOC107585097,LOC107667762,LOC107582952,LOC107740660 coding upstream 17509 22344662 ~ 22347767 (+)
lsm12a lsm12a,LOC107585053,LOC107740636,LOC107662400,LOC107708984,LOC107562026,LOC107582879 coding upstream 22740 22336995 ~ 22342536 (+)
tanc2a tanc2a,tanc2,LOC107662401,LOC107711284,LOC107585082,LOC107667760 coding upstream 108284 22124890 ~ 22256992 (+)
LOC122341813 NA coding downstream 2410 22374082 ~ 22382787 (+)
gngt2a NA coding downstream 13059 22384731 ~ 22387485 (+)
col1a1a LOC107585052,LOC107740634,LOC107582926 coding downstream 62701 22434373 ~ 22449649 (+)
ppp1r9ba ppp1r9b,ppp1r9ba,LOC107740632,LOC107717206,LOC107667750,LOC107582927 coding downstream 83730 22455402 ~ 22490790 (+)
nr1d1 LOC107585045,LOC107740628,LOC107662394,LOC107582883,LOC107667757 coding downstream 197295 22568967 ~ 22575990 (+)
LOC122341843 NA non-coding upstream 275345 22035882 ~ 22089931 (+)
G22201 NA non-coding upstream 630854 21734138 ~ 21734422 (+)
G22198 NA non-coding upstream 728706 21636123 ~ 21636570 (+)
G22197 NA non-coding upstream 729197 21635744 ~ 21636079 (+)
G22084 LOC107684649,LOC107590786,LOC107725047,LOC107582907,LOC107678868,LOC107710878 non-coding upstream 982152 21381808 ~ 21383124 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding downstream 139756 22511428 ~ 22672911 (+)
G22554 ddx5,LOC107695114 non-coding downstream 568575 22940247 ~ 23028505 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding downstream 717801 23089473 ~ 23095422 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding downstream 729272 23100944 ~ 23148618 (+)
G22584 NA non-coding downstream 742606 23114278 ~ 23116840 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other upstream 29049 22268986 ~ 22336227 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other upstream 339365 21976509 ~ 22025911 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other upstream 388611 21975252 ~ 21976665 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other upstream 631149 21637743 ~ 21734127 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other upstream 950990 21295702 ~ 21414286 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other downstream 157317 22528989 ~ 22530060 (+)
G22329 LOC107585049,LOC107740630,LOC107662396,LOC107582928,LOC107717208 other downstream 174486 22546158 ~ 22547208 (+)
hoxb5a hoxb5a,LOC107717200,LOC107662384,LOC107687777,LOC108413114,LOC107740619 other downstream 350350 22722022 ~ 22726158 (+)
hoxb2a hoxb2,hoxb2a,LOC107585087,LOC107662381,LOC107582889,LOC107687781 other downstream 393975 22765647 ~ 22770602 (+)
LOC122341356 il2rb,LOC107695139,LOC107583317 other downstream 527661 22899333 ~ 22908135 (+)

Expression


Co-expression Network