aldh16a1 (aldh16a1,LOC107693504,LOC107730774,LOC107658477,LOC107583027,LOC107729490)


Basic Information

Item Value
gene id aldh16a1
gene name aldh16a1,LOC107693504,LOC107730774,LOC107658477,LOC107583027,LOC107729490
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11844166 ~ 11852179 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043231809.1
TTCACTATTTTCGCTGTTTTGGTGGCTTGGTGTTAGCACGGCATATACTACAATACCGTTTTTGCCTGGTTTTCTTGCCCGATCTGGCAACACAACACAACCCAGGAAGAAATACCAGCGTGGAGTTGTAAGCTCACGGTCAAATTGTTATGGCAGGTACGTCAATAAAGACTGTGCACGACATCTTTCAAAATATGGAGTATGGACCGTCCAGCACGAGTACAGCAACTGCACAGTCATGGCTTGATAAACACTCTCGCACTCTTGGCCTCTTCGTTGGTGGGAAATTTTCCAGCCCTGCAGACAGACGGACGCAGGATGTGACTGATTGCAAAGCGGCGGTGGTCTGCAGCACTGTTTGTGCTAAAGATGAGGATGTCGCGTCTGCTTCCTCATCGGCAGCTGAAGGCTTCAAAACCTGGAGTGAACTGAGCTGCTACCAAAGAGCCAAAGTGTTCCTCAAGTTGGCGGGTGTCCTGCAGAGACACAgtcagtgtgtgtctgagctGTGTGAGCTCTCTCAGTCTTCTGCCTCTCCTGCTGTGTTCATTAGACTGGCCCAATACTATGCCAGCTGGGCTCAGCTACGAGACACGCTCATTCCTGAGTGGATCCCGCAAGGTGTTGTGGCAGTGGTTGTTTCAGATGACTGCTCTGTATACTTTCTTCTGCTTAAGGTATTACCAGCTCTAGCTATGGGCAATGCTGTTATTGTGGTGCCTGGCAAGACTACCGCTCTGCCTGCCCTTCTGTTGGCTCAGCTGTTTATGGAGGCTGGGATCCCTGCTGGCGTGCTGAATGTGGTCACAGGCAGTGAGGCATCATTGGGTGCCAAAGTGGCTCAAAATCCACAGGTGAACTACCTGACCTACAGCGGAAGACAGCAGACCGGAGAAGTCCTGGCTAAAGCAGTGGCTGGTTGGGGAGTCcccctgtctttctctctctcactcagcTCGGTGTGCCCTTTTATCATCTTTGATTCGGCAGACCTCGACAGTGCTGTGGACGGAGTGATAGAGCTGGcctttaagaagaaaaaagatttCCAGTGGGTGCTCTATGTGCAGGAATCAGTGCTGGACAGTGTTGTGGCCAGACTGAAGTTAAGAATGACTGGCATGAAATGTATTCCTCTTGCCACTGAAACTGACAGGAACCTTATAGATGCTGCAATTCAGGAGGCCCAGCAGCAGGGGGCAAAACTGATCCAGTCGTGTCCTCCTGGAACTGGTGCTCTCTACCCTCCTACTGTATTGTGTGGACTGGCTCCTTCCTGCGAGTCCGTGATTTCCCCTCCTCCGGGCCCTGTGCTAGCCCTTATATCTTTCAGGAGCTCTGCTGAGGGAGTTACACTTGGTAACCACAGTCCTCATGGACAGGCGGCCTCCATCTGGACAGAGGATTTGACTCTGGCTTTGGAGTCTGCAAAGAGCCTGTGTGTAGGTTCGGTGTGGGTGAACAGTCATTCTGTTATAGATCCTGCATTGCCTCTGTGTGGACGGAGGGAGAGCGGGAACTGCACTGATGGAGGCAGAGagGGTCTGTATCAGTTCCTTCGGCCGTCACGTTCACCCTCCCTCCCCCGCTCCAGTCCCAGCTCTATCAACTATGCAGATTTTGGCTCTGCAGCTTCCAAATTAATGATACCTGAAGGATTTGATCCTTCCAGCGTCCCTCGCTTTTACTCCCAGTTTGTGGGTGGTCAGTTGCGTAAAGCAGATTCGGGCTGCAGCAGGTCAGTTTTGGCCCCTGGGGGTGATGTACTAGCTCACTGCCCAGACGGAGGCAGGAAGGATGTCCGGAATGCAGTGGAGGCCGCCATTAAGGTCCAGCCAGGGTGGATGAAGAAAAGCCCCACTGCACGCTCTCAGTCTCTCTATTCACTTGCTGACATGCTAGATAAGAGGAGACGGGTCTTGGCTGTATCAATCCAGACTCAAACCGGCATCTCATTAGAAGACGCAGAGAAAGAGGTGGAGCTTAGCGTCTCCAAACTTTATGATTGGGCTGCACGCTGTGATAAAGAGCAGGGTGGAACTCCATTCCCGCCTCAGTCTGGTTCCGCCCTGTCATCTCCCGAGGCTTTAGGGGTGCTGGGAGTGATTCTCCCCGACTCCAAACCACTGCTCTCTCTGGTGTCCTTGCTAGGGGCAGCTATTGCAATGGGTAATGCTGTTGTCATGGTGCCAAGTGAAAAATACCCTCTTCCAGCTCTtgaattcatacagGTCCTGCAGGCCTCTGATATCCCTGGAGGTCTGGTCAGTATAATAACAGGTGTCAGGGATCAGCTGACCCAGGCACTTGCCAACCACAGTGTGATTCAAAGCATTTGGTATTGGGGAAGTAAAGAGGGCTGTCAGTTTCTTGAATACACCTGTGTAAGTCCCCTTAAACGTCTGTGGCTGCACtgtgaagaggaggaggagagggaaGCAGGACAGAACTGGACCAGCTCAAATCCCTCTCTTCAAGAAGAACTTTGGAGGAAGGCAGTGGTCTGGAAAAGTATTTGGATCCCTACTGCATAAAGCACTTATTATTAAAGTTTGGGCAACAGAAAGCGATGTTAGGAGAACCTCTAACATTTGtttcactttcaaaaatcatgtgaAATAAGGAAggttatttttatgaatgtttcCCATGACAGACGGTTGTATTCTGACAAATAAACTGTTATAACAAG

Function

symbol description
aldh16a1 Predicted to enable oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Is expressed in several structures, including intermediate cell mass of mesoderm; liver; neural tube; spinal cord; and vasculature. Orthologous to human ALDH16A1 (aldehyde dehydrogenase 16 family member A1).

NR:

description
PREDICTED: aldehyde dehydrogenase family 16 member A1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043231809.1 True 2692 mRNA 0.51 17 11844166 11852179

Neighbor

gene id symbol gene type direction distance location
zgc:193811 LOC107693501,LOC107548311,LOC107583087,LOC107729427 coding upstream 71662 11767888 ~ 11772504 (+)
lin7b lin7b,LOC107730776,LOC107548331,LOC107693502,LOC107658474 coding upstream 76665 11762672 ~ 11767501 (+)
snrnp70 LOC107729450,LOC107693498,LOC107658470,LOC107730757,LOC107548330,LOC107583035 coding upstream 81632 11754248 ~ 11762534 (+)
strada strada,LOC107693497,LOC107658471,LOC107548327,LOC107730762 coding upstream 94238 11740279 ~ 11749928 (+)
dcaf7 dcaf7,LOC105030232,LOC105898766,LOC100702343 coding upstream 198723 11640702 ~ 11645443 (+)
LOC122333949 zgc:92066,LOC107693508,LOC107730763,LOC107548336,LOC107658480,LOC107583030,LOC107693507,LOC107730746,LOC107548335 coding downstream 1583 11853762 ~ 11855061 (+)
LOC122336178 LOC107583028,LOC107729487,LOC107658478,LOC107583029,LOC107729488,LOC107658479 coding downstream 5592 11857771 ~ 11876558 (+)
LOC122336152 LOC107583029,LOC107729488,LOC107583028,LOC107658478,LOC107658479,LOC107729487 coding downstream 5609 11857788 ~ 11880887 (+)
LOC122336061 LOC107583028,LOC107658478,LOC107729487,LOC107583029,LOC107729488,LOC107693507,LOC107730746,LOC107548335 coding downstream 5652 11857831 ~ 11859206 (+)
LOC122336094 LOC107583028,LOC107658478,LOC107729487,LOC107693507,LOC107583029,LOC107658480,LOC107548335,LOC107730746 coding downstream 9597 11861776 ~ 11862929 (+)
LOC122338225 NA non-coding upstream 8913 11834772 ~ 11835253 (+)
G19184 NA non-coding upstream 124587 11712609 ~ 11719579 (+)
G19126 NA non-coding upstream 402828 11440506 ~ 11441338 (+)
G19123 NA non-coding upstream 406969 11436944 ~ 11437197 (+)
G18946 smg1,LOC107729485,LOC107583093,LOC107658410,LOC107732845 non-coding upstream 463376 11380273 ~ 11380790 (+)
G19208 NA non-coding downstream 115469 11967648 ~ 11974006 (+)
G19255 NA non-coding downstream 220540 12072719 ~ 12073073 (+)
G19257 NA non-coding downstream 222052 12074231 ~ 12074503 (+)
G19263 NA non-coding downstream 266359 12118538 ~ 12118775 (+)
G19274 NA non-coding downstream 280450 12132629 ~ 12134957 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 10242 11773200 ~ 11833924 (+)
G18949 NA other upstream 474414 11368893 ~ 11369752 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other upstream 508341 11333741 ~ 11335825 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other upstream 1001659 10752759 ~ 10842507 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other upstream 1145626 10691890 ~ 10698540 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other downstream 33476 11885655 ~ 11893656 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other downstream 174970 12027149 ~ 12049422 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other downstream 240424 12092603 ~ 12100852 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other downstream 261869 12114048 ~ 12117939 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 380248 12232427 ~ 12249997 (+)

Expression


Co-expression Network