LOC122334091


Basic Information

Item Value
gene id LOC122334091
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8174036 ~ 8177995 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043231983.1
GTCTGCGCATGCGCGAGGTCACGCTGAGAGAGAGTCTTCTTCTGCTCGTCTTTCTTCTCTAACCTGCGCCTTTCGGGGTCGTGCAGCGATCACCTTCAGAGATTCAACAGCGAGGCGAGCTGCTCTGTATGATATACTACGAGGAGGATCCTCCTAAAACAGCGAGGAGTTAGGGATGGGTTTCCTGCGGGATCCGGATCAGGAGGAAGTTGATGAAGATCTGGAGGTTAACTTTAAAGTCAGAATCAGGAAAGCAGGCTTTAAAAGTTCATAttcagtgaagctcctcccacaatAATCACATgttcagtccttcagaaataaaTGCTGGAATATTCCTTCGGTTTCTGAGTGAAGACGAGCATCAGATCATCAGGAAGAGTTTCttacagacagagagaagatgAGAGATCCAGAACACACTGAAGAGACTGAAGAACAGACAGAGTTGGTTGGAGGTAACGAGGGGAAAGAAGAATCGAGCGAAGTCGAGATAGATTGTTTGAGAAGTGGAGAGAAACCCAAACAGAAAAGACGGGCCACGAAATCTTTGAGCTGcactcagtgtggaaagagtttctcAAACAAACACCATCTGGAGCTTCACATGAGagtccacactggagagaaaccctTCAGCAGCGGGAAGACGTTCCCGAGCGCTTTAGACCTGAAGAATCACCTGACCGTTCACACCAAGGAGAAACCGCATTCGTGCCATTTGTGTGGAAACAGGTTTTCACATCGACAGAGTCTGAAAGAACACGAGAAAATACACAGCGGCGTGAGAGATCACGTGTGCTGCGCGTGCGAGAAGACCTTCACCACGGCGCAGTGTTTAAAACGacacgagaggatccacaccggagagaaaccctaCGAGTGTTCACACTGCCACAAGAGATTCAGAGACTCATCCAGCCTGAAGACACACGAGatgatccacaccggagagagaccGCACGCCTGCGACCAGTGCCAGAAGAGCTTCACACTGAAGGCGAGGCTCACGGACCACATGAgagtccacaccggagagaagcccttcaCCTGTGGACAGTGCTGGAAGAGTTTCTCGCTGTCCGGACACTTCAAGAAACACATGAACATCCACACCAGAGAGAAGCTCTACACCTGCGCTCGCTGCGGGAAGACGTTCCTGAGAGCTTCGTACCTGAAGCAGCACCAGACCGTTCACACCAAGGAGAAACCGCATTCCTGTGAGCTGTGCGGAAAGAGCTTTTCTCGTTTGGAGAATTTGAAAGTGCATCAGAAAACACACGCTGCGGTCAAAGAGTACGTGTGCTTCGAGTGCGAGAAGACCTTCACTACAGCGAGCCATTTGAAGCAGCACCAGAAGATCCACTCCGGAGAGAGACCTTACCAGTGTTCGCTCTGTGACAAGACATTCAGTCGGAGAGGAACCCTGAAAATACACCAGAGGACTCACTCCGGAGAGAGACCGTACGGCTGTGCTGCGTGCGGGAAGCGCTTCAATCACTCGTCTGCTCTTCACAAACACACTAAACACTGTCGTCTTCAGGTCCAGCTCTTTCAGGTTTGATGTGAGACATCCCCGGATGAGTGAATAAGTAAAGTCCTTTTACTTTGTTACTGTACTTAAGTGCATTTCTGTTtcctccttgtttaactgaagaaggTTTAGCCACAACCAGCTGTTGATTTGACCTGCTTAGCTCTGATAGGTGACTGATTAGTTATTATCTGAGTCAGTGGGAGCATGTAGGGTTTAAACAGGAGCGGTGCGAGAACAGAGCCTTGTGGGACGCCGCCTCTTAGACTCATGATCTCTTATACTCACACAATAACCTCTCTCTCTTCTAGATTGTGctttaacttaacttaaccTGCAGTTTTCAGGGAGTGTGGTGGTCCCAGGAAGAAGTGCTGTGTTCTCCTCTAAACAGACCTCTGAAGGTGTGACGGTCGAAGGCTGAATGGTTGAGTTTTTCTGACTTCTTCACGACCGGAGGATTTATTCATTGCCTTTCTGATATCACTGATCTTCTCAGGAAGAAGGAAGCAAACCTAACTTCCTTCCCTGGGAATCGGACTCTTCTGTGTCTGAATGTGAAAAGCAGGTATCAAGCGTTCTGACATCCAGCGACAGAGTCCTGAAGAAACCATGGAGGAGTATGTGGCTGAGAGCACAGAGAGACGACGCGGAGGAAACTGAAAAGAGAATATTCTTCTGTCCGTGTGTTTCCTGGTGTCTCGGCACCGTCTGTGGTTTTCTCTTAGATCTCTGATCTCTTCTGACTCCATATTCGTGAAGTGGACTCTATCCTCATCTCTCTGCCTGCTGGAGTTGTCTGACTCAATAAAAACGTCTGATTTATTAAACACA
>XM_043231984.1
GTCTGCGCATGCGCGAGGTCACGCTGAGAGAGAGTCTTCTTCTGCTCGTCTTTCTTCTCTAACCTGCGCCTTTCGGGGTCGTGCAGCGATCACCTTCAGAGATTCAACAGCGAGGCGAGCTGCTCTGTATGATATACTACGAGGAGGATCCTCCTAAAACAGCGAGGAGTTAGGGATGGGTTTCCTGCGGGATCCGGATCAGGAGGAAGTTGATGAAGATCTGGAGGTTAACTTTAAAGTCAGAATCAGGAAAGCAGGCTTTAAAAGTTCATAttcagtgaagctcctcccacaatAATCACATgttcagtccttcagaaataaaTGCTGGAATATTCCTTCGGTTTCTGAGTGAAGACGAGCATCAGATCATCAGGAAGAGTTTCttacagacagagagaagatgAGAGATCCAGAACACACTGAAGAGACTGAAGAACAGACAGAGTTGGTTGGAGGTAACGAGGGGAAAGAAGAATCGAGCGAAGTCGAGATAGATTGTTTGAGAAGTGGAGAGAAACCCAAACAGAAAAGACGGGCCACGAAATCTTTGAGCTGcactcagtgtggaaagagtttctcAAACAAACACCATCTGGAGCTTCACATGAGagtccacactggagagaaaccctTCAGCAGCGGGAAGACGTTCCCGAGCGCTTTAGACCTGAAGAATCACCTGACCGTTCACACCAAGGAGAAACCGCATTCGTGCCATTTGTGTGGAAACAGGTTTTCACATCGACAGAGTCTGAAAGAACACGAGAAAATACACAGCGGCGTGAGAGATCACGTGTGCTGCGCGTGCGAGAAGACCTTCACCACGGCGCAGTGTTTAAAACGacacgagaggatccacaccggagagaaaccctaCGAGTGTTCACACTGCCACAAGAGATTCAGAGACTCATCCAGCCTGAAGACACACGAGatgatccacaccggagagagaccGCACGCCTGCGACCAGTGCCAGAAGAGCTTCACACTGAAGGCGAGGCTCACGGACCACATGAgagtccacaccggagagaagcccttcaCCTGTGGACAGTGCTGGAAGAGTTTCTCGCTGTCCGGACACTTCAAGAAACACATGAACATCCACACCAGAGAGAAGCTCTACACCTGCGCTCGCTGCGGGAAGACGTTCCTGAGAGCTTCGTACCTGAAGCAGCACCAGACCGTTCACACCAAGGAGAAACCGCATTCCTGTGAGCTGTGCGGAAAGAGCTTTTCTCGTTTGGAGAATTTGAAAGTGCATCAGAAAACACACGCTGCGGTCAAAGAGTACGTGTGCTTCGAGTGCGAGAAGACCTTCACTACAGCGAGCCATTTGAAGCAGCACCAGAAGATCCACTCCGGAGAGAGACCTTACCAGTGTTCGCTCTGTGACAAGACATTCAGTCGGAGAGGAACCCTGAAAATACACCAGAGGACTCACTCCGGAGAGAGACCGTACGGCTGTGCTGCGTGCGGGAAGCGCTTCAATCACTCGTCTGCTCTTCACAAACACACTAAACACTGTCGTCTTCAGGTCCAGCTCTTTCAGGTTTGATGTGAGACATCCCCGGATGAGTGAATAATTTTCAGGGAGTGTGGTGGTCCCAGGAAGAAGTGCTGTGTTCTCCTCTAAACAGACCTCTGAAGGTGTGACGGTCGAAGGCTGAATGGTTGAGTTTTTCTGACTTCTTCACGACCGGAGGATTTATTCATTGCCTTTCTGATATCACTGATCTTCTCAGGAAGAAGGAAGCAAACCTAACTTCCTTCCCTGGGAATCGGACTCTTCTGTGTCTGAATGTGAAAAGCAGGTATCAAGCGTTCTGACATCCAGCGACAGAGTCCTGAAGAAACCATGGAGGAGTATGTGGCTGAGAGCACAGAGAGACGACGCGGAGGAAACTGAAAAGAGAATATTCTTCTGTCCGTGTGTTTCCTGGTGTCTCGGCACCGTCTGTGGTTTTCTCTTAGATCTCTGATCTCTTCTGACTCCATATTCGTGAAGTGGACTCTATCCTCATCTCTCTGCCTGCTGGAGTTGTCTGACTCAATAAAAACGTCTGATTTATTAAACACA
>XM_043231985.1
GTCTGCGCATGCGCGAGGTCACGCTGAGAGAGAGTCTTCTTCTGCTCGTCTTTCTTCTCTAACCTGCGCCTTTCGGGGTCGTGCAGCGATCACCTTCAGAGATTCAACAGCGAGGCGAGCTGCTCTGTATGATATACTACGAGGAGGATCCTCCTAAAACAGCGAGGAGTTAGGGATGGGTTTCCTGCGGGATCCGGATCAGGAGGAAGTTGATGAAGATCTGGAGAAGTTCATAttcagtgaagctcctcccacaatAATCACATgttcagtccttcagaaataaaTGCTGGAATATTCCTTCGGTTTCTGAGTGAAGACGAGCATCAGATCATCAGGAAGAGTTTCttacagacagagagaagatgAGAGATCCAGAACACACTGAAGAGACTGAAGAACAGACAGAGTTGGTTGGAGGTAACGAGGGGAAAGAAGAATCGAGCGAAGTCGAGATAGATTGTTTGAGAAGTGGAGAGAAACCCAAACAGAAAAGACGGGCCACGAAATCTTTGAGCTGcactcagtgtggaaagagtttctcAAACAAACACCATCTGGAGCTTCACATGAGagtccacactggagagaaaccctTCAGCAGCGGGAAGACGTTCCCGAGCGCTTTAGACCTGAAGAATCACCTGACCGTTCACACCAAGGAGAAACCGCATTCGTGCCATTTGTGTGGAAACAGGTTTTCACATCGACAGAGTCTGAAAGAACACGAGAAAATACACAGCGGCGTGAGAGATCACGTGTGCTGCGCGTGCGAGAAGACCTTCACCACGGCGCAGTGTTTAAAACGacacgagaggatccacaccggagagaaaccctaCGAGTGTTCACACTGCCACAAGAGATTCAGAGACTCATCCAGCCTGAAGACACACGAGatgatccacaccggagagagaccGCACGCCTGCGACCAGTGCCAGAAGAGCTTCACACTGAAGGCGAGGCTCACGGACCACATGAgagtccacaccggagagaagcccttcaCCTGTGGACAGTGCTGGAAGAGTTTCTCGCTGTCCGGACACTTCAAGAAACACATGAACATCCACACCAGAGAGAAGCTCTACACCTGCGCTCGCTGCGGGAAGACGTTCCTGAGAGCTTCGTACCTGAAGCAGCACCAGACCGTTCACACCAAGGAGAAACCGCATTCCTGTGAGCTGTGCGGAAAGAGCTTTTCTCGTTTGGAGAATTTGAAAGTGCATCAGAAAACACACGCTGCGGTCAAAGAGTACGTGTGCTTCGAGTGCGAGAAGACCTTCACTACAGCGAGCCATTTGAAGCAGCACCAGAAGATCCACTCCGGAGAGAGACCTTACCAGTGTTCGCTCTGTGACAAGACATTCAGTCGGAGAGGAACCCTGAAAATACACCAGAGGACTCACTCCGGAGAGAGACCGTACGGCTGTGCTGCGTGCGGGAAGCGCTTCAATCACTCGTCTGCTCTTCACAAACACACTAAACACTGTCGTCTTCAGGTCCAGCTCTTTCAGGTTTGATGTGAGACATCCCCGGATGAGTGAATAAGTAAAGTCCTTTTACTTTGTTACTGTACTTAAGTGCATTTCTGTTtcctccttgtttaactgaagaaggTTTAGCCACAACCAGCTGTTGATTTGACCTGCTTAGCTCTGATAGGTGACTGATTAGTTATTATCTGAGTCAGTGGGAGCATGTAGGGTTTAAACAGGAGCGGTGCGAGAACAGAGCCTTGTGGGACGCCGCCTCTTAGACTCATGATCTCTTATACTCACACAATAACCTCTCTCTCTTCTAGATTGTGctttaacttaacttaaccTGCAGTTTTCAGGGAGTGTGGTGGTCCCAGGAAGAAGTGCTGTGTTCTCCTCTAAACAGACCTCTGAAGGTGTGACGGTCGAAGGCTGAATGGTTGAGTTTTTCTGACTTCTTCACGACCGGAGGATTTATTCATTGCCTTTCTGATATCACTGATCTTCTCAGGAAGAAGGAAGCAAACCTAACTTCCTTCCCTGGGAATCGGACTCTTCTGTGTCTGAATGTGAAAAGCAGGTATCAAGCGTTCTGACATCCAGCGACAGAGTCCTGAAGAAACCATGGAGGAGTATGTGGCTGAGAGCACAGAGAGACGACGCGGAGGAAACTGAAAAGAGAATATTCTTCTGTCCGTGTGTTTCCTGGTGTCTCGGCACCGTCTGTGGTTTTCTCTTAGATCTCTGATCTCTTCTGACTCCATATTCGTGAAGTGGACTCTATCCTCATCTCTCTGCCTGCTGGAGTTGTCTGACTCAATAAAAACGTCTGATTTATTAAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043231983.1 True 2368 mRNA 0.49 3 8174036 8177995
XM_043231984.1 False 2086 mRNA 0.50 4 8174036 8177995
XM_043231985.1 False 2330 mRNA 0.49 3 8174036 8177995

Neighbor

gene id symbol gene type direction distance location
irgf4 NA coding downstream 53007 8109057 ~ 8121029 (-)
LOC122331782 NA coding downstream 82412 8084369 ~ 8091624 (-)
LOC122331758 NA coding downstream 206165 7966808 ~ 7967871 (-)
LOC122331721 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 coding downstream 207818 7964659 ~ 7966218 (-)
LOC122341277 NA coding downstream 279759 7890178 ~ 7894277 (-)
LOC122331822 NA coding upstream 56904 8234899 ~ 8257213 (-)
LOC122341283 hebp1,LOC107670539,LOC107661078 coding upstream 124076 8302071 ~ 8305993 (-)
LOC122329328 hebp1,LOC107670539,LOC107661078 coding upstream 207069 8385064 ~ 8388690 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 320737 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 335418 8513413 ~ 8524779 (-)
G18165 NA non-coding downstream 18444 8048971 ~ 8155592 (-)
G18159 NA non-coding downstream 85315 7989728 ~ 8088721 (-)
LOC122331793 NA non-coding downstream 94536 8076874 ~ 8079500 (-)
LOC122331807 NA non-coding downstream 149457 8023611 ~ 8024579 (-)
G18160 NA non-coding downstream 164028 7990515 ~ 8010008 (-)
G18142 NA non-coding upstream 1268 8179263 ~ 8181729 (-)
G18146 triobp,stap2,triobpb,LOC107574640,LOC107721687,LOC107661081 non-coding upstream 16381 8194376 ~ 8198087 (-)
G18128 NA non-coding upstream 28883 8206878 ~ 8207333 (-)
G18129 fam234b,LOC107714892,LOC107721680,LOC107576065 non-coding upstream 122419 8300414 ~ 8383611 (-)
G18155 NA non-coding upstream 128729 8306724 ~ 8389631 (-)
LOC122334075 NA other downstream 2375 8058631 ~ 8171661 (-)
LOC122331739 NA other downstream 159335 8010976 ~ 8014701 (-)
LOC122341278 adgrl1,LOC107711219,LOC107599314,LOC107602690,LOC107661818,LOC107744976 other downstream 228063 7920404 ~ 7945973 (-)
LOC122331786 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 other downstream 260602 7896602 ~ 7913434 (-)
LOC122341856 LOC107711206,LOC107602719,LOC107661829,LOC107711209,LOC107711210,LOC107661830,LOC107599345,LOC107602722,LOC107728674 other downstream 1464655 6702503 ~ 6709381 (-)
LOC122339740 NA other upstream 29703 8207698 ~ 8209093 (-)
LOC122342198 NA other upstream 40907 8218902 ~ 8219055 (-)
fmc1 NA other upstream 131537 8309532 ~ 8398828 (-)
zgc:113210 NA other upstream 814719 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 956048 9134043 ~ 9138089 (-)

Expression


Co-expression Network