LOC122334671 (LOC107563545)


Basic Information

Item Value
gene id LOC122334671
gene name LOC107563545
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29773885 ~ 29785104 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043232683.1
GTCCTCGTATTTACTTCCGcgttgaaaaataaagtgctttggTGTGTGTTCGTTGAATGACCTCGTTCAAAGTACAaatcaaagtaccgcgagagcgTAAAGAGAACACAGAACCGTTAGTCGATCTCGCGATACTTTGATGTTATGCACCTTGTACTTTACATGTGACGTTTACACCTGATCGTTTTTTTCTGATCGAAAAACCGTATCATTAACCCaatcatcattttaatgtttatgcggggacatacatgaacataaagagaaaacaaagacattttgagaagtTGTCCAGAAACTGAACGTTTTGATCAAAGCAAGTCTTCagctgtggagcagaaagacacttccttattcatTCGTGAGTTGGTGAAGGACGATGGCGTCTGTTAAAAAGCTGCTCTTGGACCAACTGATGGAGCTGGCAGAAGATGAACTGAAGAAATTTCATTGGCATTTAGTGAATTTTTATCAAAAGTGCATATCAAAGTCTGAATTGAAAAATGCAGATAGATGTGACACAGTAGATAAGATGGTGATGTGTTTTGGACCAGATGAAGCTGTGAAGGTCATGGTAGACGTCCTGAGAAAGATAAACCAAAATGATCTGGCTGAACAGTTGCAGAATGAACACAAGCaagCTCAGACTGAGGACAATATGAAGACATCTGTCTCTGTTAGAGagctccaaaatgtcttgaaaactcacaaaaacaacatgaagatgaagacaaaatacatttttgagggCAACAAAGAAACTGACACAGATCTGAAAGCTGTTTACACAGatctgttcatcacagaggGAGATATGAAAGATGTAAATCAGGAACATGAGATTCTGAAGATTGATGATGCTTTCAAgagcaaaaaaacactgaacaaaccaatcaaatgcaatgatatatttactgaactGAGGAAAAACAATGAGTTAAAGATTGTGTTGACCAAAggagtcgctggcattggaaaaactgtgtttgtgcacaagttcatcctggactgggtAGAAGGAGAATCTAATCAGGATATAGACTGTGTGTTCCTgcttccattcagagagatCAATGTGATTAAAGAAAGAGAGGTCAGTCTCCATGAGTTTCTGCTGAAATTTAATCCTGAATTGATGTTCCTGGAGAAATCAAAGttatatacagaatataaacttgtgtttatttttgatggacttgatgagAGTCGACTGCCTTTGAATTTTGAAAGTGATACATTGAACACTGTTGAGGAAAGATCATCTGTAGATGTGCTGTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTCACATcacgaccagcagcagccaatcagatccctccTCAGTATGTAGGATTGTTCACAGAAGTGCAAGGATTCACTGACCTACAGAAGGAGGAGTACTTCAGAAAGAGATTCACAGATCAGAGTCTGTCCTCCAGAATCATCTCCCACATTAAGACGTCTCGTAgtctctacatcatgtgccacattcctgtgttctgctggatcacagccacagtacttcaggatattctcactgagaacaatgaagagaacatcagcacaacactcactgaaatgtacattcacttcctgAGGATACAGATGAACATGAAGAGTCAGAAATATGGCAAACAACAAGACGGAGAATGTTCAGAGCACTTACTTTTAAATAGAGAGATGATTCTGAAGTTAGCCAAGCTAGCGTTTGAACAGCTGAAGcaggaaaacattgtgttctatGAGAAAGATCTGAAAGCATGTGGTATTGATGTGAGTAAAGATGCTGAGTTCACAGGAATGATCGCTCAGATCTTTAAGAAGGAAGTTGGACTTTATAAGAGAAAGGTCTTCTGCTTTGTGCATCTGAGCGCTCAAGAGTTCCTCGCTGCAGTGCATGTGTTCACCtgttacctgaaaaaaaacaagcaagagcttatgtttttctttgagaATTCACAAACTAAAGTCATACAAAATCTTACATTTCCTTTTAGAAAGGTCAAATGGCATGACTTAACAGAGAGAGCCATTGAAAAAGCAATGCAGAGTAAGAGAGGGCATCTGGACCTTTTCCTGCGGTTTCTGATGGGAATTTCACTGGAATCCAGTCAAAATTTGCTCAAaggcctgatcacacacacCAAAGACACCACAGAGAGCATCAGAAATCTAAGTGCACACATTAAAGAATTACAACAACAGGACATCTCAGATGAAACTTCAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAAGATCATTCATTATATGAGGAAATACAGAGTTACctcagttcaaatgaacatccaGGAAGAGATCTCTCGTCTTCAATGTGCACAGTGCTGACCTACATACTACTGATGTCAGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGGTTCACATCAGAACAATCAGATTGCAGGAGACTCATTCCAGCtgtgagatgctgcagaaacgctctATTTGAAAGCTgtggttttgatgaaacatgctgtgaaactctttcttctgctctacaatcatcaaaccatctgacagagctggacctgagtaacaatgatctgcaggattcaggagtgaagctgctttctgatggactgaagagttcaCACTGTAGACTGAAGATAATGAGgtTGTCAGGCTGcatggtgacagaggaaggctgtggttatgtgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcACTAAATAAACTTAAtgttgagcatggaggagaatccaggattacagcaggactCAAGAAATatgagtgttttttcacactggatccaaacacagcataTACTCTTCTCattctgtctgaggagaacagaaaggTGAAGTGGgtgtctcagtctcagtcgtatcctgatcatccagacagatttgatggtGTGTATcctcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggagactgagtgCAGTGGACTTGTGtttatatcagtgtcatataagaacatcagcaggaagggacTGGGTAAAGAGTTTGAGTTTGGatctaatgatcagtcctggagtttgatctGCTCTCCTCACAGAtactcattcagacacaataagataatgactgatctctctgtgaagcccatcttcatcagaagaagaagaacaggagagTATAAAGATATctacagagtaggagtgtatgtggatgagagcgcaggaactctgtccttctttagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcCTGGGTTTTATGTTGGTTATAAAgcatcagtgaaactgtgttgatgaatcagaagagactgatgagattctacccagaatgctttgagctgcatgatgaaTCAGTAACAGTGAGATGTTATGAGTCTCTTCAAGACATTAATACTTCAGCTCAACTTCTATAGAATCAGAAATATAAg
>XM_043232684.1
AGTTGTCATCCGGGATTAAACCAGTCTCGAGACCGACTCCATTGTGACgtgaaacatgaaagtgaaagtgatcGACTCTGGCTCCTCCTATCCTGTAGGACGTCAGCTCTCCGTTGCTATGCGACAGGAGCGGTAATCTAGAACACCTGAGGAAATCCCGAGGAGGCGTGGCTTCGAGCTTCACGCGCTTCAGTTTGGGACACAGATACAgtggtctgtgtttgtttccacTAGCTGCTCGTGAAACGGAAGTTTAACACATTAGAATCGTGAGTTGGTGAAGGACGATGGCGTCTGTTAAAAAGCTGCTCTTGGACCAACTGATGGAGCTGGCAGAAGATGAACTGAAGAAATTTCATTGGCATTTAGTGAATTTTTATCAAAAGTGCATATCAAAGTCTGAATTGAAAAATGCAGATAGATGTGACACAGTAGATAAGATGGTGATGTGTTTTGGACCAGATGAAGCTGTGAAGGTCATGGTAGACGTCCTGAGAAAGATAAACCAAAATGATCTGGCTGAACAGTTGCAGAATGAACACAAGCaagCTCAGACTGAGGACAATATGAAGACATCTGTCTCTGTTAGAGagctccaaaatgtcttgaaaactcacaaaaacaacatgaagatgaagacaaaatacatttttgagggCAACAAAGAAACTGACACAGATCTGAAAGCTGTTTACACAGatctgttcatcacagaggGAGATATGAAAGATGTAAATCAGGAACATGAGATTCTGAAGATTGATGATGCTTTCAAgagcaaaaaaacactgaacaaaccaatcaaatgcaatgatatatttactgaactGAGGAAAAACAATGAGTTAAAGATTGTGTTGACCAAAggagtcgctggcattggaaaaactgtgtttgtgcacaagttcatcctggactgggtAGAAGGAGAATCTAATCAGGATATAGACTGTGTGTTCCTgcttccattcagagagatCAATGTGATTAAAGAAAGAGAGGTCAGTCTCCATGAGTTTCTGCTGAAATTTAATCCTGAATTGATGTTCCTGGAGAAATCAAAGttatatacagaatataaacttgtgtttatttttgatggacttgatgagAGTCGACTGCCTTTGAATTTTGAAAGTGATACATTGAACACTGTTGAGGAAAGATCATCTGTAGATGTGCTGTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTCACATcacgaccagcagcagccaatcagatccctccTCAGTATGTAGGATTGTTCACAGAAGTGCAAGGATTCACTGACCTACAGAAGGAGGAGTACTTCAGAAAGAGATTCACAGATCAGAGTCTGTCCTCCAGAATCATCTCCCACATTAAGACGTCTCGTAgtctctacatcatgtgccacattcctgtgttctgctggatcacagccacagtacttcaggatattctcactgagaacaatgaagagaacatcagcacaacactcactgaaatgtacattcacttcctgAGGATACAGATGAACATGAAGAGTCAGAAATATGGCAAACAACAAGACGGAGAATGTTCAGAGCACTTACTTTTAAATAGAGAGATGATTCTGAAGTTAGCCAAGCTAGCGTTTGAACAGCTGAAGcaggaaaacattgtgttctatGAGAAAGATCTGAAAGCATGTGGTATTGATGTGAGTAAAGATGCTGAGTTCACAGGAATGATCGCTCAGATCTTTAAGAAGGAAGTTGGACTTTATAAGAGAAAGGTCTTCTGCTTTGTGCATCTGAGCGCTCAAGAGTTCCTCGCTGCAGTGCATGTGTTCACCtgttacctgaaaaaaaacaagcaagagcttatgtttttctttgagaATTCACAAACTAAAGTCATACAAAATCTTACATTTCCTTTTAGAAAGGTCAAATGGCATGACTTAACAGAGAGAGCCATTGAAAAAGCAATGCAGAGTAAGAGAGGGCATCTGGACCTTTTCCTGCGGTTTCTGATGGGAATTTCACTGGAATCCAGTCAAAATTTGCTCAAaggcctgatcacacacacCAAAGACACCACAGAGAGCATCAGAAATCTAAGTGCACACATTAAAGAATTACAACAACAGGACATCTCAGATGAAACTTCAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAAGATCATTCATTATATGAGGAAATACAGAGTTACctcagttcaaatgaacatccaGGAAGAGATCTCTCGTCTTCAATGTGCACAGTGCTGACCTACATACTACTGATGTCAGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGGTTCACATCAGAACAATCAGATTGCAGGAGACTCATTCCAGCtgtgagatgctgcagaaacgctctATTTGAAAGCTgtggttttgatgaaacatgctgtgaaactctttcttctgctctacaatcatcaaaccatctgacagagctggacctgagtaacaatgatctgcaggattcaggagtgaagctgctttctgatggactgaagagttcaCACTGTAGACTGAAGATAATGAGgtTGTCAGGCTGcatggtgacagaggaaggctgtggttatgtgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcACTAAATAAACTTAAtgttgagcatggaggagaatccaggattacagcaggactCAAGAAATatgagtgttttttcacactggatccaaacacagcataTACTCTTCTCattctgtctgaggagaacagaaaggTGAAGTGGgtgtctcagtctcagtcgtatcctgatcatccagacagatttgatggtGTGTATcctcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggagactgagtgCAGTGGACTTGTGtttatatcagtgtcatataagaacatcagcaggaagggacTGGGTAAAGAGTTTGAGTTTGGatctaatgatcagtcctggagtttgatctGCTCTCCTCACAGAtactcattcagacacaataagataatgactgatctctctgtgaagcccatcttcatcagaagaagaagaacaggagagTATAAAGATATctacagagtaggagtgtatgtggatgagagcgcaggaactctgtccttctttagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcCTGGGTTTTATGTTGGTTATAAAgcatcagtgaaactgtgttgatgaatcagaagagactgatgagattctacccagaatgctttgagctgcatgatgaaTCAGTAACAGTGAGATGTTATGAGTCTCTTCAAGACATTAATACTTCAGCTCAACTTCTATAGAATCAGAAATATAAg
>XM_043232685.1
GTCCTCGTATTTACTTCCGcgttgaaaaataaagtgctttggTGTGTGTTCGTTGAATGACCTCGTTCAAAGTACAaatcaaagtaccgcgagagcgTAAAGAGAACACAGAACCGTTAGTCGATCTCGCGATACTTTGATGTTATGCACCTTGTACTTTACATGTGACGTTTACACCTGATCGTTTTTTTCTGATCGAAAAACCGTATCATTAACCCaatcatcattttaatgtttatgcggggacatacatgaacataaagagaaaacaaagacattttgagaagtTGTCCAGAAACTGAACGTTTTGATCAAAGCAAGTCTTCagctgtggagcagaaagacacttccttattcatTCGTGAGTTGGTGAAGGACGATGGCGTCTGTTAAAAAGCTGCTCTTGGACCAACTGATGGAGCTGGCAGAAGATGAACTGAAGAAATTTCATTGGCATTTAGTGAATTTTTATCAAAAATGAAGCTGTGAAGGTCATGGTAGACGTCCTGAGAAAGATAAACCAAAATGATCTGGCTGAACAGTTGCAGAATGAACACAAGCaagCTCAGACTGAGGACAATATGAAGACATCTGTCTCTGTTAGAGagctccaaaatgtcttgaaaactcacaaaaacaacatgaagatgaagacaaaatacatttttgagggCAACAAAGAAACTGACACAGATCTGAAAGCTGTTTACACAGatctgttcatcacagaggGAGATATGAAAGATGTAAATCAGGAACATGAGATTCTGAAGATTGATGATGCTTTCAAgagcaaaaaaacactgaacaaaccaatcaaatgcaatgatatatttactgaactGAGGAAAAACAATGAGTTAAAGATTGTGTTGACCAAAggagtcgctggcattggaaaaactgtgtttgtgcacaagttcatcctggactgggtAGAAGGAGAATCTAATCAGGATATAGACTGTGTGTTCCTgcttccattcagagagatCAATGTGATTAAAGAAAGAGAGGTCAGTCTCCATGAGTTTCTGCTGAAATTTAATCCTGAATTGATGTTCCTGGAGAAATCAAAGttatatacagaatataaacttgtgtttatttttgatggacttgatgagAGTCGACTGCCTTTGAATTTTGAAAGTGATACATTGAACACTGTTGAGGAAAGATCATCTGTAGATGTGCTGTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTCACATcacgaccagcagcagccaatcagatccctccTCAGTATGTAGGATTGTTCACAGAAGTGCAAGGATTCACTGACCTACAGAAGGAGGAGTACTTCAGAAAGAGATTCACAGATCAGAGTCTGTCCTCCAGAATCATCTCCCACATTAAGACGTCTCGTAgtctctacatcatgtgccacattcctgtgttctgctggatcacagccacagtacttcaggatattctcactgagaacaatgaagagaacatcagcacaacactcactgaaatgtacattcacttcctgAGGATACAGATGAACATGAAGAGTCAGAAATATGGCAAACAACAAGACGGAGAATGTTCAGAGCACTTACTTTTAAATAGAGAGATGATTCTGAAGTTAGCCAAGCTAGCGTTTGAACAGCTGAAGcaggaaaacattgtgttctatGAGAAAGATCTGAAAGCATGTGGTATTGATGTGAGTAAAGATGCTGAGTTCACAGGAATGATCGCTCAGATCTTTAAGAAGGAAGTTGGACTTTATAAGAGAAAGGTCTTCTGCTTTGTGCATCTGAGCGCTCAAGAGTTCCTCGCTGCAGTGCATGTGTTCACCtgttacctgaaaaaaaacaagcaagagcttatgtttttctttgagaATTCACAAACTAAAGTCATACAAAATCTTACATTTCCTTTTAGAAAGGTCAAATGGCATGACTTAACAGAGAGAGCCATTGAAAAAGCAATGCAGAGTAAGAGAGGGCATCTGGACCTTTTCCTGCGGTTTCTGATGGGAATTTCACTGGAATCCAGTCAAAATTTGCTCAAaggcctgatcacacacacCAAAGACACCACAGAGAGCATCAGAAATCTAAGTGCACACATTAAAGAATTACAACAACAGGACATCTCAGATGAAACTTCAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAAGATCATTCATTATATGAGGAAATACAGAGTTACctcagttcaaatgaacatccaGGAAGAGATCTCTCGTCTTCAATGTGCACAGTGCTGACCTACATACTACTGATGTCAGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGGTTCACATCAGAACAATCAGATTGCAGGAGACTCATTCCAGCtgtgagatgctgcagaaacgctctATTTGAAAGCTgtggttttgatgaaacatgctgtgaaactctttcttctgctctacaatcatcaaaccatctgacagagctggacctgagtaacaatgatctgcaggattcaggagtgaagctgctttctgatggactgaagagttcaCACTGTAGACTGAAGATAATGAGgtTGTCAGGCTGcatggtgacagaggaaggctgtggttatgtgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcACTAAATAAACTTAAtgttgagcatggaggagaatccaggattacagcaggactCAAGAAATatgagtgttttttcacactggatccaaacacagcataTACTCTTCTCattctgtctgaggagaacagaaaggTGAAGTGGgtgtctcagtctcagtcgtatcctgatcatccagacagatttgatggtGTGTATcctcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggagactgagtgCAGTGGACTTGTGtttatatcagtgtcatataagaacatcagcaggaagggacTGGGTAAAGAGTTTGAGTTTGGatctaatgatcagtcctggagtttgatctGCTCTCCTCACAGAtactcattcagacacaataagataatgactgatctctctgtgaagcccatcttcatcagaagaagaagaacaggagagTATAAAGATATctacagagtaggagtgtatgtggatgagagcgcaggaactctgtccttctttagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcCTGGGTTTTATGTTGGTTATAAAgcatcagtgaaactgtgttgatgaatcagaagagactgatgagattctacccagaatgctttgagctgcatgatgaaTCAGTAACAGTGAGATGTTATGAGTCTCTTCAAGACATTAATACTTCAGCTCAACTTCTATAGAATCAGAAATATAAg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043232683.1 True 3573 mRNA 0.41 8 29774160 29785104
XM_043232684.1 False 3481 mRNA 0.42 8 29773885 29785104
XM_043232685.1 False 3496 mRNA 0.41 9 29774160 29785104

Neighbor

gene id symbol gene type direction distance location
LOC122334720 LOC107570416,LOC107685875,LOC107749047,LOC107728228 coding upstream 48778 29691307 ~ 29725107 (+)
LOC122335371 LOC107758342 coding upstream 448965 29321348 ~ 29324920 (+)
pycr1a pycr1a,pycr1,LOC107732146,LOC107675279,LOC107717481,LOC107671247,LOC107571301,LOC107552109 coding upstream 482441 29288138 ~ 29291444 (+)
LOC122335289 myadml2,LOC107671249,LOC107675441,LOC107717480,LOC107571305,LOC107552108,LOC107732151 coding upstream 486703 29284692 ~ 29287182 (+)
notum1a notum,notum1a,LOC107732149,LOC107671240,LOC108438914 coding upstream 490147 29274653 ~ 29283738 (+)
LOC122341412 NA coding downstream 131149 29916253 ~ 29921491 (+)
LOC122335675 NA non-coding upstream 27010 29726194 ~ 29746875 (+)
G24438 LOC105357980 non-coding upstream 272555 29500518 ~ 29501330 (+)
G24406 NA non-coding upstream 410117 29363551 ~ 29363768 (+)
G24398 LOC107575850 non-coding upstream 425233 29347735 ~ 29348652 (+)
G24386 NA non-coding upstream 455288 29312729 ~ 29318597 (+)
G24464 NA non-coding downstream 29515 29814619 ~ 29815647 (+)
LOC122333787 NA non-coding downstream 136431 29921535 ~ 29922299 (+)
LOC122342119 NA non-coding downstream 138061 29923165 ~ 29924120 (+)
G24546 NA non-coding downstream 153319 29938423 ~ 29938813 (+)
G24436 NA other upstream 273766 29499523 ~ 29500119 (+)
LOC122335508 LOC107717477,LOC107698766,LOC107552107,LOC107671248,LOC107740236 other upstream 330912 29439949 ~ 29442973 (+)
LOC122335632 NA other upstream 371282 29391918 ~ 29402603 (+)
LOC122335232 LOC107677928 other upstream 467645 29298708 ~ 29306240 (+)
cenpx stra13,LOC107676172,LOC107689848,LOC107732147,LOC107552128 other upstream 543654 29228716 ~ 29230231 (+)

Expression


Co-expression Network