zgc:100868 (LOC107654462,LOC107738142,LOC107581796)


Basic Information

Item Value
gene id zgc:100868
gene name LOC107654462,LOC107738142,LOC107581796
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15250534 ~ 15257035 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233603.1
GTGCGTGGGTGTGTAGGAAACAGGTTAACCGGGATATTTAAGAGCAGGTGCAGGTTTCTGAGCTGTGCCATCTGAGAAGAAGATGACGAAAATGATCCATGTACTCAGTGTAGCACTTTCCATCACTCTTCTGATAAGAGGATGTGATGCACAACTGGATGTGTGCGGCAGAGCTCCTCTCAACACGAGGATAGTTGGAGGGCAGAGTGCGGCGGCTGGTGCTTGGCCGTGGCAGGTCAGCCTTCAAAGGAACGGCGGTCATTTCTGCGGTGGATCCCTCATCAACAGCGAATGGGTTCTGACTGCAGCTCACTGCTTTTCAAGCACTACACCCGCTGGCCTGACTGTGTACCTGGGCCGACAGACACAGTCAGGAACAAATACAAACGAAGTGTCCAGGACTGTGTCTGCAGTCATAAAGCATTTAGGCTACGATGGCAGCACTAATGACAACGACATCACTCTTCTGCATCTGTCTTCACCGGTGACATTTACTGACTACATCAGACCAGTCTGTCTGGCTTCATCAAGCAGTACGTTCTTCAACCGAACTGCGAGCTGGGTCACCGGATGGGGAAACATTGGATCAGGTGTTGCGCTGCCCTCGCCGCAAACTCTACAGGAAGTACAAGTGCCTGTTGTTGGAAACAGGCAGTGTAAGTGTCTTTATGGAGTCTCAAAAATCACAGACAACATGATATGTGCCGGACTATTAGAAGGAGGGAAAGACTCTTGCCAGGGTGACTCTGGCGGTCCTATGGTCAGCAAGCTGGGCTCCCTCTGGGTCCAGTCTGGAATCGTGAGCTTTGGCGAAGGCTGTGCTTTAGCTAACTATCCTGGTGTGTATACCCGAGTGTCTAATTACCAGAGCTGGATAAATAACCAGATCACCACCAGCCAGCCAGGCTTTGTTACGTTTACTTCCAATGGTACTGACGGTGACCTGGCAATTAGCTGTAATGGTGTGCCTGCCATTACCACAACCACTGTCGCCACCACAACAACAACTACAACTGTCGCACCTGTAGTGTGTGGAAGCGCCAAACTGAACACCCGTATTGGAGGAAACAGCTCCCTCACCTCTTCCGTTGTTTGGCCGTGGATGGCCAGCTTGCAGTTTAACGGCAGTCACGTTTGTGGAGGATCGCTGATTGCCGCACGCTTTGTCATGAGCTCTGCCAGCTGCTTTAACAGATCCACCAAAGCCTCTGACTGGACCGTCATCTTGGGCCGTCTGAATCAGAACGGCTCCAACCCTAATGAGGTCTCTATTAAAGTGGCCAATCTCACAATCAGCAATGGTACAGGCGACAACATTGCAGTCTTGCAGCTGGCCGTTGCACCAAACCTCACAAATTTCATTCAGCCTATATGTGTGGACATGGGAGACAATACCTTCAGCGCTAACACTCAATGCTGGGCGGCAGGATGGGgctccggagcaggaggagTGAGTCAAACTCTTCAGGAGTACCAGACCTCTGTTGTGAGTTGTGGAAACTCATCCTCAAACAGCAATATTTGTACAAGTTCCTTGAACTTACAGGAGGGCGATCAGGGTGGTGCGCTGATGTGTAAGCTGGGTCAGTCGTGGATCCACGCTGCAGTCTTGACTGTACAGAGCAGCAGCATCCAGACCAGCATTTCAAACAGCAGCAGCTCTAACACAAGCTCCAGCAACAGCACCGCTTCCCGCACCGTCCGCGCTCAAGATGTCCAGGTCTTCACCAAAACCTCCAACTACGCCTCATTCCTGACATCTGTTGTGGGCTCCTTCCCTGGAAAAGCCACAAACGCCACAAATTCAACGACAAGCGTAGCAGGAATCAACAACTCAACCCAGGGTCCCTCTAATGGGGCCCAAACGGCTTCTTCCTTCTGTTTCACCGTTTCAGTCCTCTTGCCTGCCCTTACAGCTCTTAAAATCTTTCATTAAGGCTGAGTCTTTGGAGTAGATTTATTCATTATGAATGGGTATGTAAGTATTCCGACACGTAATAGATGCCTTCAGTGTGCTTCCTATGTGCTATAACataatcataaaacataaacattttttgtggcacacatcatttatttttactgtataaatgtGAACTCTTAAGTTCTCTTATTGTTATTTCAGACCATGAAGCTGCTGCCTGTTGTTTTTACACTGTACAACTAGTAACAAGTGCATAgcttatacttatatttaaacaGTAGCAGAAGGTTGGCACTTTACTGAAACTTCCTGTTTGAGTGGATTCAGTTCTAATACTGACTACACTGTAGCTTAACTAACAAGTACCTCAAGCTGTACCACATTTAGGACATTACTGTAAATTGAATATATTGTAGAGAGAATATATACATCCACACAATTTTTAGAAAAGTGTttcataatatgaaaataatatgaaaCTTTTATCCCTCctctattatatttttaatgaaaagttgCTATCCTATGATTTCTTACGAATGAAGAAACTCTTTTCAACACACCGTTTTTACactgtgaaatgtaaatgtatattttgttctaaaaattattattaaaattccaaatagtg

Function

NR:

description
PREDICTED: transmembrane protease serine 9-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K09630 PRSS36; polyserase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233603.1 True 2555 mRNA 0.46 10 15250534 15257035

Neighbor

gene id symbol gene type direction distance location
tmem98 tmem98,LOC107674611,LOC107720031,LOC107738157,LOC107654470 coding upstream 151437 15092956 ~ 15099097 (+)
kcnj19a si:dkey-106c17.3,LOC107654469,LOC107581800,LOC107737881,LOC107674737,LOC107720030,LOC108432058 coding upstream 200097 15029823 ~ 15050437 (+)
asic2 asic2,LOC107654528,LOC107674665,LOC107720021,LOC108411330,LOC107592342 coding upstream 292808 14684646 ~ 14957726 (+)
hrob LOC107721529,LOC107654526,LOC107601306,LOC107720097 coding upstream 571669 14672317 ~ 14678865 (+)
rps11 rps11,LOC107674708,LOC107590366 coding upstream 578975 14669481 ~ 14671559 (+)
aldoaa aldoaa,aldoab,LOC107720037,LOC107674678,LOC107581735,LOC107689930 coding downstream 23693 15280728 ~ 15285025 (+)
cln3 cln3,LOC107591583,LOC107737814,LOC107720039,LOC107674677,LOC107654539,LOC107581771 coding downstream 30573 15287608 ~ 15292909 (+)
prpsap2 prpsap2,LOC107737786,LOC107581734,LOC107654541,LOC103393631 coding downstream 36343 15293378 ~ 15300967 (+)
epn2 epn2,LOC107654543,LOC107674690,LOC107720043,LOC107591621 coding downstream 62847 15319882 ~ 15338761 (+)
cacna1ha cacna1h,cacna1ha,LOC107674675,LOC107703431,LOC107592392,LOC108430574 coding downstream 111765 15368800 ~ 15455523 (+)
G20269 NA non-coding upstream 111634 15129681 ~ 15138900 (+)
G20188 NA non-coding upstream 257497 14990229 ~ 14993037 (+)
G20179 NA non-coding upstream 260542 14972299 ~ 14989992 (+)
G20183 NA non-coding upstream 278873 14971012 ~ 14971661 (+)
G20180 NA non-coding upstream 281249 14920245 ~ 14969285 (+)
G20415 NA non-coding downstream 330177 15587212 ~ 15588809 (+)
LOC122334397 NA non-coding downstream 457697 15714732 ~ 15727870 (+)
LOC122334400 NA non-coding downstream 463212 15720247 ~ 15721303 (+)
G20452 LOC107674632,LOC107720067,LOC107591813,LOC107748300 non-coding downstream 604978 15862013 ~ 15864962 (+)
G20465 NA non-coding downstream 615767 15872802 ~ 15873925 (+)
G20286 LOC107581737,LOC107654534 other upstream 65661 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other upstream 81276 15168338 ~ 15169258 (+)
G20172 rps11,LOC107674708 other upstream 578966 14664919 ~ 14671568 (+)
G20167 NA other upstream 627676 14618994 ~ 14622858 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other upstream 635126 14535179 ~ 14615408 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other downstream 12765 15269800 ~ 15280113 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other downstream 449901 15706936 ~ 15744194 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other downstream 922585 16179620 ~ 16207846 (+)
LOC122331507 psmg3,LOC107703392 other downstream 1433668 16690703 ~ 16699482 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other downstream 1513510 16770545 ~ 16784811 (+)

Expression


Co-expression Network