nmt1a (nmt1,nmt1a,LOC107737859,LOC102778525)


Basic Information

Item Value
gene id nmt1a
gene name nmt1,nmt1a,LOC107737859,LOC102778525
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15149891 ~ 15158341 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233693.1
GTGTGAGAGCGCAGGGCGAGATCCTCACTTCCTGGTTAAAGATGGCGGATGAGAATGAGACAGCACCGCAGCCGGAGAAAGAAACTGAGGTAGAAGTGGATCACGGACACTGCAGCAATTGTGAAAATGAAGAGCATCACTCCGATGATGGGGAGAAGGGAGACACGGGTgccaagaagaagaaaaagaaacagaagaaaaagaacaaagacaAGTCTGGAGGACAAGATGTAGCACAGGACCCGTTGGCCAAAGTAAACTCCCTTCCTGCAGATAAGTTACAGGAGATCCAGAAGGCCATTGAGCTGTTTTCGGTCGGACAGGGTCCGGCTAAAACCATGGAGGAGGCCACACGTCGCAGCTATCAGTTCTGGGACACTCAGCCTGTTCCTAAACTTgGAGAGACTGTGACGTCACACGGCTGCATTGAGGCAGATAAGGACAACATACGAGAGGAGCCCTACAGCCTTCCTCAGGGCTTCACCTGGGACACTCTCGACCTGGGAAACCCTGGAGTGCTGAAAGAGCTGTACACTCTCCTGAATGAGAACTATGTGGAGGATGATGACAACATGTTTCGTTTTGATTACTCCCCTGAATTTCTGCTCTGGGCTCTGCGTCCTCCAGGCTGGTTGCCTCAGTGGCACTGTGGAGTGAGAGTGAACTCTAATCATAAGCTAGTTGGTTTCATCAGTGCCATTCCAGCCAACATCCGCATCTATGAAATagagaagaagatGGTGGAGATTAACTTCCTGTGTGTTCATAAGAAACTTCGCTCGAAACGAGTGGCTCCGGTACTCATCAGGGAGATCACCAGACGGGTCAACCTGGAGGGAATCTTTCAGGCCGTGTACACTGCAGGTGTGGTGCTGCCCAAACCAGTGGGCACCTGCagATACTGGCATCGGTCCTTGAACCCACGGAAGCTGATTGAGGTGAAGTTCTCTCACCTGAGTCGAAACATGACTATGCAACGAACCATGAAGCTCTACCGCCTGCCAGAGGCTCCTAAGACTTCAGGCCTCAGGCCGATGACTGTAAAGGATGTGCCAGCAGTTCACCGTCTGCTGAAGGAATACCTGAGCCAGTTTAACCTGGTTCCTGTCATGAGCCCCGAGGAGGTCCAACACTGGCTGCTTCCTCAGGAGAACATCATTGACACCTTTATAGTGCAGAATTCAGACGGGAAGGTGACTGACATCCTGAGTTTCTACACTCTGCCGTCCACCATCATGAACCATCCTGTGCATCGCAGTCTGAAGGCTGCGTATTCCTTCTATAATGTACACACCACCACCACCTTGCTAGACCTGATGGGAGACGCTCTCATCCTCGCCAAGTCGAAAGGATTTGATGTCTTTAATGCACTGGACCTAATGGAGAACAAGACATTTTTGGAGAAGCTCAAGTTTGGCATTGGGGATGGAAACCTGCAGTATTACCTCTACAATTGGAAATGTCCCAGCATGGGGTCAGAAAAGgtgggTTTGGTTCTACAGTGACCTATTCCACCCTCCGTAATCTGTGTCTCGCATGACAGCGAGGCGGATTTATGACATCACGCATTGACCACCTGACAGATGCTACCAATGGACTTCCTGCTCCAGGAAGGAAAATCCACCGGCCATTTTTAAGTTTGAACTTTGACCTTTTGGACCTGCACTACTGCTGCCAGACTGAGAGAAGATgcgttttcttctcttttctctcttatttctctctctctctttccctcactCTTCTTCTTATTCTCTCTCTGCGCATGGACCTAAAGCCATTGTAATTACCATCATCAGAGATGAGGAACCTTAATCTGTTATGATTGTTAACAACagtgcatacatacacacacacacacacacacacacacacataggtaACACCAGACAAGCTCAAGATGAACCCTGATGCGTAAGTGTTGCGCTGTTCGCATCGGTAGATTCAACCCGTTCAGTATAACATGATTTTACTCTCCCTGTCCAACGGGAGGTGCTTTTTTTGCAGAAACATGGATGATAATGTTAATTTCCTCAGTGTTTTAGAAAACAACAGACAACAATCAGACACATGAAAAttccaagagaaaaaaaacagccaatgaaatgataaaaatcccAAGTGGACATGACAAGGGCTGCTGTCAATGATTTTTTTCCTGTGGTCGTTCTCTCCTTCGCACATCTTAAGCTGTTGCCATGTCTCTACTTTCTTTTGACAAACGTTGACCAACTGATGTGTGCGGTACATGGcgaatgagatttttttttttttttttttttctgtcttggtTTTGCTTTGTCATTGCTTTTAATCTGTCCTCTAATcagtttattgcatttttgtctCTAACTGCCTGTGATTCCCTTTCACTGTATTGCCAACAGAGAAGCGCCGTATGTTTTCCCGGAAACAACGAGAAATACCACATAAGATCCACAGGCTGATAATGGTTGGAACTTTAATGTATACCTGGCGGATTAGGGAGGGGATCATCATAAATTAGCAATAATGATGGTGTTTTTCTGAGGAAATGGTTTTGTTTGGGGGGGGTGGGGGAGCTGAAACACGGAGTTAAGAATGAAATGTGGTGAATTATGTCGTGGACGATAGATTTTGCCTGCTCATAAAGTCGTACAGCTCTATAAGGATTGGAGAAGATCCTGATTGTATTGCAACTCTTATTTATCATGCGACTTCATCTGTCCAGCAAGTGGAAGCGGATTGATGTCCCAAATCAGTACAGTTTTATGAGTAACTGGCAGTATCTATTTAAAGTTGTGGTTTTCTTGAACATAGTATGGGTAATTTGAGGAAACGTGTTGTGGAAAGTACAATGGAAGCAACTGAAAACGGGTCTTTAGGTTTTTATGATGGAGTGAAAGATGTCaacatgtattaatttttttttttttttttttttttttaaataaaaagtagcaGCTGCTGTGAA

Function

symbol description
nmt1a Predicted to enable glycylpeptide N-tetradecanoyltransferase activity. Predicted to be involved in N-terminal peptidyl-glycine N-myristoylation. Predicted to act upstream of or within N-terminal protein myristoylation. Predicted to be active in cytoplasm. Orthologous to human NMT1 (N-myristoyltransferase 1).
nmt1 Enables glycylpeptide N-tetradecanoyltransferase activity. Involved in N-terminal peptidyl-glycine N-myristoylation and cellular ketone metabolic process. Located in cytosol and plasma membrane. Is extrinsic component of membrane.

NR:

description
PREDICTED: glycylpeptide N-tetradecanoyltransferase 1

GO:

id name namespace
GO:0006499 N-terminal protein myristoylation biological_process
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity molecular_function

KEGG:

id description
K00671 NMT; glycylpeptide N-tetradecanoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233693.1 True 2953 mRNA 0.45 12 15149891 15158341

Neighbor

gene id symbol gene type direction distance location
LOC122341310 LOC107674591 coding downstream 1746 15146294 ~ 15148145 (-)
LOC122341946 LOC107720104,LOC107592690,LOC107674628 coding downstream 8870 15138220 ~ 15141021 (-)
LOC122341944 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding downstream 11997 15131415 ~ 15137894 (-)
retsat.2 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding downstream 19304 15126501 ~ 15130587 (-)
cdk21 cdk21,LOC107581773,LOC107591488,LOC107674697,LOC107720098,LOC107738149,LOC107654471 coding downstream 23523 15122546 ~ 15126368 (-)
arhgap23a LOC107581737,LOC107654534,LOC107591523 coding upstream 22261 15180602 ~ 15243122 (-)
fam83ga LOC107738115,LOC107654540,LOC107581794 coding upstream 143907 15302248 ~ 15309607 (-)
grapa grapa,LOC107654542,LOC107720042,LOC107581733,LOC107737776,LOC107592716,LOC107674739,LOC108430571 coding upstream 151404 15309745 ~ 15316561 (-)
b9d1 b9d1,LOC107737762,LOC107674617,LOC107654544 coding upstream 180621 15338962 ~ 15341877 (-)
llgl1 llgl1,LOC107720045,LOC107674688,LOC107703430 coding upstream 303953 15462294 ~ 15491956 (-)
G20253 NA non-coding downstream 159900 14988277 ~ 14989991 (-)
G20248 NA non-coding downstream 190604 14956739 ~ 14959287 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding downstream 298029 14849717 ~ 14851862 (-)
G20233 asic2,LOC107720021,LOC107654528,LOC107601227,LOC107674665,LOC107720082,LOC107590422 non-coding downstream 462455 14632214 ~ 14687436 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding upstream 93754 15252095 ~ 15254617 (-)
G20338 aldoaa,LOC107581735,LOC107720037,LOC107674678,LOC102778271,LOC103381979 non-coding upstream 122006 15280347 ~ 15333486 (-)
G20352 epn2,LOC107674690,LOC107720043,LOC107654543 non-coding upstream 161369 15319710 ~ 15324611 (-)
G20363 NA non-coding upstream 207795 15366136 ~ 15366451 (-)
G20546 NA non-coding upstream 476731 15635072 ~ 15637612 (-)
LOC122341947 NA other downstream 4283 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 710350 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 945541 14202930 ~ 14204350 (-)
G19933 NA other downstream 1343913 13805368 ~ 13805978 (-)
gng13b NA other downstream 1357289 13786009 ~ 13792602 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 440429 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1292799 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1294733 16453074 ~ 16455479 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 1557380 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 1704384 16862725 ~ 16873987 (-)

Expression


Co-expression Network