LOC122337169 (LOC107731852,LOC107571197)


Basic Information

Item Value
gene id LOC122337169
gene name LOC107731852,LOC107571197
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 21363439 ~ 21366154 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233759.1
TTTCTCTTTTCTGTACCATAGATGAGACTGAAAGATCAAATACAAACTCTATGAGGATTCTACTTATTGGAAAAACTGGAAATGGGAAAAGTGCCACAGGAAACACTATTCTCAAAAGAAAGGCATTTAAATCTCAAGCCAGTTTTAAATCAGTGACATCCTCTTGTCAGAAGGAGGTGGGGTTTGTTGATGGACATTCAGTCACTGTTGTTGATACACCAGGTCTGTTTGACACACAAGTCTCTACAGAAGAGGTAAAACAAGAGATAGTGAAGTGCATCAGTCTCCTCTCTCCAGGACCTCATGTGTTCCTTCTGGTGCTTAGATTCGGAAGATTCACTcctgaagaaaaagaaactctGAACCTGATCAAGGAAGCGTTTGGGAAGAACGCTGGAATGTTTAGCATCATAATATTCTCTCATGGTGATCAGCTGCAAGATCAGACAATTGAGAGCTGTCTGGaaaaaacagattcagatATGAAGAAGCTGATCAGAGATTGTGGAGGAAGATATCATGTGATTGACAATACAAAACCAGACAATTCTAAACAAATCACTGACTTGCTGGAAAAAATCAACTGTATGATTGAAAAGAATGGAGGAGGGTGTTACACCAATGAGATGTTTGAAGAATCAGAAGGTGCCATAAAACTAGCAATGGAaagaatattacagaaaaagaaagaagagatggaaagagagaacAAACGTTTATGTGACAAACATGAGTTGGAGATGGCAGAGATGAAGAAAAGAATAGCAGAACAAAGAGAGTTATTGGAAAGAGAAAGGAAGGCAAAGGAAGAAGAACTCCAAATCAAGGAAGAGTTCTTGCAAAATGAACTTAAGAGAAGGGATGAACAAGAaaagaaggagaagaaagaaagacaagaagCTGAAGACCTTAGAAGAATAGAAGAGGAGGATACACAGGCACTATGGAAAAGGAAACTACACGAAATAGAAGAGAAACGAAGAAGATTAGAAGAACAGCAACAGAAGAGAGACCAGGAATATAGAGAGaagtatgagagagagaggacagaaaTGGAGGAAATTCATAAAAAGAGACTGAGGAGAGAACATGAAGAAGAATACCAGAAAAGACTTAAAGAGGAGAGGAGTGAATGGGCACTAAAAGAGAAGATGATGGTTGAAGAATTtgaacaagaaaaaagaaaaagagaagaaaaagaacatgAAAGGATTAAGAATGAgcttaaagaaagagagagaatagagagaGAGTATGAGAACAGTAAAATAGAGAtgagaaaacagagagaagaatGGGAAAAATCATGGAATGAAGAATGGGATAAAAGAGTGagagaagagaaggagagaagggatgaagagagagagaaactgagaAAGCTTGAAGAAGCATTTCAGCGAGAGCgtaaagaggaggaggagaagaggaagagagaagatAAAGCCCGACGAGAACAGGAGGAGAAAGAACGAAAAGAAATGGAGGAAGAATATGAAaggaaattaaaagaaatgaagagaaAGTATGAAGATGAGGCCAGAAAACAAGCAGAGGAATTCAATGATTTCAGAGAGAAATATACTAAAGACTTTCATGTTCTCATGGTAAAGCATGACTTAGAGATGCAAGAGCTAAAGCTAAAGcatgaaagagagaaacaaaaacagtgcACCCTATTGAGTGAACTCTCAAAGCAAAAAGTTAAAAGTCTGAATGAAAAAATGGAAGCAATGGAAGAGCAACATCAAAGAGAGGTTGATGAGCTGAAGAAGAAGTATGAGTCCAAATGTGTCTTACTGTAATACTGATATCTTACTATTTATAGCCTGACATTAGAAGATTGAAGTGAGCATCTTGTATGtgctttaaaggggtcatgaactgaggTCATTTGACATACACTATTCTTGCGGGTTTGACCAGTAGTGTCCATCTATGAGGAATTACCATATTTCATATCTCTCTCTACTCCCAGATAAATATTGTatcctttttaaaacattttttataaggGTTTGTATGGACTGTCTCCATATATCCCAAATATCCCCGATCTCCTATAGCGCCTACAGGGAACTTAACTACTAGTCTTCAGTTGACTGATCTAAAGACACTTCTGAAATCATTTCTAATGTCTTTTTAGTAGCTGCTCCACAACTTTGCCATTCTATATAAGATATGCACCAACATATGCAGACATTATTATATGCAGAAATAGATCACCCAATAAtgtctgtcataatttactcacgctcaagtagttccaaatctgtatgaatttgatatttgtatgaagatattttgaagtaaGTTattctatggaagtcaatggtgactaTGAATTAATCAAACTGCCACTATCTGTAACTAGCTGTAGGcctataaatagcagaaaatccTGCTCAGATGTCACAGACATCTGATGAAAATGTTAGATCATTTTATGTGCGATGATCACCAAGCAATAATTTGCGATTAACATCCATTTCCCATTTCAAGCAATATTTTCATgtaaagctattttattttattttattttttcaatttacttGGGTGGCTTAGGTGGACTACCAAGTAAACCTACAGCCTATGATAACCtacagatatgaagctggatatgttgttttgaaaatctcccagcatattaatattgttttgaagtcataatatgatattcttcaagtaattgtgcaaaaatttcactttattaac

Function

NR:

description
PREDICTED: GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233759.1 True 2715 mRNA 0.36 2 21363439 21366154

Neighbor

gene id symbol gene type direction distance location
LOC122341347 NA coding upstream 325 21354367 ~ 21363114 (+)
LOC122337639 syngr1a,LOC107725053,LOC107684634,LOC107727456,LOC107590782,LOC107582870,LOC107694963 coding upstream 20191 21330328 ~ 21343248 (+)
LOC122341346 LOC107582910,LOC107684633,LOC107725046,LOC107694962,LOC107590781,LOC107727455 coding upstream 33883 21316273 ~ 21329556 (+)
zwi zwi coding upstream 116631 21244992 ~ 21246808 (+)
LOC122337590 nxph3,LOC107710880,LOC107568907,LOC107660556,LOC107754835,LOC107590800 coding upstream 305190 21030624 ~ 21058249 (+)
LOC122337825 LOC107590788,LOC107684637,LOC107710882,LOC107678872 coding downstream 22993 21389147 ~ 21403118 (+)
LOC122341349 LOC107725047,LOC107590786,LOC107678868,LOC107710878,LOC107684649,LOC107582907,LOC107725048,LOC107684648 coding downstream 63528 21429682 ~ 21437955 (+)
LOC122340007 LOC107710878,LOC107678868,LOC107725047,LOC107590786,LOC107582907,LOC107684649 coding downstream 75768 21441922 ~ 21444741 (+)
LOC122341350 LOC107738996 coding downstream 81017 21447171 ~ 21450709 (+)
cdc27 cdc27,LOC107740649,LOC107754304 coding downstream 417302 21783456 ~ 21795403 (+)
G22046 zwi non-coding upstream 20170 21247604 ~ 21343269 (+)
LOC122337857 NA non-coding upstream 71504 21290349 ~ 21291935 (+)
LOC122337912 fam57b,LOC107684641,LOC107678875,LOC107754912,LOC107710888 non-coding upstream 93947 21253746 ~ 21269492 (+)
LOC122337868 NA non-coding upstream 112009 21248110 ~ 21251430 (+)
G22044 NA non-coding upstream 149823 21141065 ~ 21213616 (+)
G22084 LOC107684649,LOC107590786,LOC107725047,LOC107582907,LOC107678868,LOC107710878 non-coding downstream 15654 21381808 ~ 21383124 (+)
G22197 NA non-coding downstream 269590 21635744 ~ 21636079 (+)
G22198 NA non-coding downstream 269969 21636123 ~ 21636570 (+)
G22201 NA non-coding downstream 367984 21734138 ~ 21734422 (+)
LOC122341843 NA non-coding downstream 669728 22035882 ~ 22089931 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other upstream 406865 20882198 ~ 20956574 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 1167718 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 1249941 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 1294186 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 1960263 19399408 ~ 19403176 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 271589 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 609098 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 610355 21976509 ~ 22025911 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other downstream 902832 22268986 ~ 22336227 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other downstream 1162835 22528989 ~ 22530060 (+)

Expression


Co-expression Network