G17507


Basic Information

Item Value
gene id G17507
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9143361 ~ 9143834 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19635
TGTTCAGATACATGGTATCATGGATTCTATCAAATACCAACAGATAAAAGATCAAAACGTGACCGCTTCTGCTAGAAATCCAATAATGGGCCTTGGTTGGATCTTCCATCAGGACAATGATCCAAAACAAACATCAAAACCAACACAAAAATGTGTCACTGAGCACAAAATGAAGCTTCTGCCATGGCCATCACAGTCCCCTGACCTGAACCCTAAAGAAAATGAGTGGAGTGAACTGAAGAGAAGAAGCACCGACATGGAGCTGGGAATCTGAAGGATCTGTAGAGATTCTGTATGAAGGAACGGTCTGTGATCTCTTGTCAGGTGTTCTCCAAACTCATCAGGCATTATAGGAGAAAACTCAGAGCTGTTATCTTGGGAAAAGGAGGTTGCAAAAAGTATTGAATAAAAGGGTGCCAATGATTGTGGCCAACGTGTTTTGGAGAAAAACATTTATTTCATAATGTGATTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19635 True 474 lncRNA 0.49 1 9143361 9143834

Neighbor

gene id symbol gene type direction distance location
CI01000001_09113045_09130978 NA coding upstream 12039 9113045 ~ 9131322 (+)
CI01000001_09059083_09101251 NA coding upstream 42009 9058864 ~ 9101352 (+)
CI01000001_09039724_09045754 NA coding upstream 97246 9039724 ~ 9046115 (+)
CI01000001_08971649_08984224 NA coding upstream 159122 8970545 ~ 8984239 (+)
CI01000001_08962231_08968219 CASP9 coding upstream 175134 8962231 ~ 8968227 (+)
CI01000001_09147684_09162673 ESYT1A coding downstream 3850 9147684 ~ 9163215 (+)
CI01000001_09164619_09166621 NA coding downstream 20707 9164541 ~ 9166725 (+)
CI01000001_09186450_09203866 FMNL3 coding downstream 42499 9186333 ~ 9203866 (+)
CI01000001_09226223_09227218 NA coding downstream 82255 9226089 ~ 9227246 (+)
CI01000001_09267532_09267951 NA coding downstream 123628 9267462 ~ 9268132 (+)
G17388 NA non-coding upstream 51976 9088542 ~ 9091385 (+)
G17385 NA non-coding upstream 114410 9028681 ~ 9028951 (+)
G17359 NA non-coding upstream 114842 9028111 ~ 9028519 (+)
G17495 NA non-coding upstream 132231 9010918 ~ 9011130 (+)
G17483 NA non-coding upstream 219617 8923496 ~ 8923744 (+)
CI01000001_09132867_09145278 PA2G4.L, PA2G4-B, PA2G4B, PA2G4, PA2G4A non-coding downstream 577 9132867 ~ 9145555 (+)
G17326 NA non-coding downstream 69622 9213456 ~ 9273959 (+)
CI01000001_09308544_09311741 NA non-coding downstream 120682 9306701 ~ 9312011 (+)
G17566 NA non-coding downstream 237301 9381135 ~ 9381660 (+)
CI01000001_09383903_09384322 NA non-coding downstream 240065 9383899 ~ 9384678 (+)
G17234 NA other upstream 1110878 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1602775 7531541 ~ 7540586 (+)
G15995 NA other upstream 3428410 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3853405 5279837 ~ 5287698 (+)
G15794 NA other upstream 4078657 5061218 ~ 5064704 (+)
G17353 NA other downstream 72188 9216022 ~ 9228859 (+)
G17354 NA other downstream 90629 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 274494 9435836 ~ 9436373 (+)
G18896 NA other downstream 1096066 10239900 ~ 10241492 (+)
G18873 NA other downstream 1113278 10223879 ~ 10260714 (+)

Expression


Co-expression Network