LOC122339678


Basic Information

Item Value
gene id LOC122339678
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8184548 ~ 8189293 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233964.1
TTATTTGGAACaagaaataattacaaatgatgAAGAACTgtgttattttgtaaaacatttgcaCAGTTGCTGACATTAGAAACCCATCCTGACAAGTAGAAACCCAGCTTTAGTATAACACGTTTACGGTCAATGAAtctttaaaggtgcagtatcCTTCTATTCTGATGCCTCAGCGTTCCATGAGAACACAGATCAGTTCAGTTGTATGTGCTGCTGTTTGATTGGCCACCTGTGTTCCGTCCACCTATCAGGATGACTCAGATGTGCTGTCAGTGGTTAGCAGCTACTGTGATGTCAGCAGAGGAGGGCGTGGCTTTGATGACGGCTCCCTCTGCATCTTGAGCCCGGACTGTGACCTCTACCTGTGTGACGGAGACGACGACCAAAGCTCGGACAGGTAAGAGTGCTTAAGAGCTTCCACTcgttttttttcacttgttaTTCTACACTCTGATTGGCATGTCAGGTCTGTGCTGTCGTTATAATGTTTATCTTgtattaaattagtttaattgCATACCTTGCTCTAAGCATGTGTTTTGTGTCATATCCTAGTCTTCGCTTATATATCTTTAATCCCAGTCAGGGTGAGGATTCCATTTACAGCAGCTCTGCAGGAACAGAGGAATACTCCAACAACCTTCATCATCCTTCATCTTGCCATAGAATGACCCGCTTGGATCCGCCACCGTACCGGGCGAGCCCCCGAGGATGGACAGAGGTGTCCCAGAGTCGCCACGATGGTCTTGGGCAGTTCAGTGCTTCTCACTGTGAGGAAAACACCAATATCCGGTTACCAATCGAGCAGCTTGTGGTGTTGTTCTGATGGTTAGAGTGGCAGTTTGAGGTGTCAGGTGGTGTTGGGTTGCACTGGGCTTTTCCTTAGCGCTGCGTCACGGTGCACGAGTGCAGTATCATTTCATGTATTAACACAGGTCATGATCTTGTCTCTCTGTCCGTAGGCAGCCAGAAAGAACGAAGGGAACGGGAGAGTGGATATTTCTCTCTGGGAAGGGCTGCAGGCAGCAGAGCCTTCCGTGAGCAAAGCCCTCCCTATAGGCATTCAGAGAGAGGGCATCCCCTGCCAAGCAACAAAAGCCCTGAACTCAAAGCCACCATTCCATTTCGAAATCCGGATCTGGGTGTCCCTTCAGAAAGGAGGACCTCTGAGTTTCAGAATGTTGAGCAGATTGAAGAAACCTATCCTCCAGAGCCAGTGGATCTCAGCCTGGAGGTCGAGGCCCTCGCTGGCCCCCGGGCCCTGAGTCCCACCCCCTTCAAACAAGCTGAATCATTTGGCGGCTCCAGTCGAAGAGCTGGACGAAATTCCCACACATCTCCCACACGGCTGTCAGGAATGCTCGATTCTTCCAAAAGAGGGTCTGTTCTCTCCCGCTCATCCTCTCCCTCCTCGTTCAGACGGGCCGAGTCTAGCTCCTCTCTCAACACGGTTGGCTTTCGATCAGTTTCACATGGACAAGATAGGACACCTGTCACTCCGGCACGAAACAGCTACTCCGGAAACCTCCGCTCATTTGCAGGCACTGTCAGTAGCATTAAtaagtctctctctcacatggATCTGAGAGGCACTTTACGGAAACCTGAGAACAATAGTTCCTTCCCAGAGAACCGTGGAAGCTCGTCTCCTTCCAGACGGAGTTATGAAGGTCCTGCTGTGaggaaaactgaaacaaaaagccCTGGTCATGACAGACAAAGTTCCTTCTCCCCAGTGGGACGCTATGATTCAAGAACTCAGTCCCCTTCCAGATGGAGTTCTGATAGGAAAACTGAGACAAAAAGTCCTTCATATGAGCGCAGTCCTGACAGACAGGGattctcctcctcatcctccttaAAGAGCCGCTATGATTCCCGAAGTCAGTCCCCTTCCAGACAAAGTTACGATaggaaaactgaaacaaaaagccCTTCATATGAGCGTGGTCTTGACAGACAGGGATTTTCTTCCTCCTCCACCTTGAAGAGCCGCTATGATTCCCGAAGCAAGTCCCCTATGGGGAGGATGGAGACCAATGGTGTATCAAGTCAGATTCAAGAGGGTCGGCGCAGTGCATCTCCAGTCAGAAAGGGCTATGGAACACTAAGTCAATCAGATCGAAGGTCAATATCTAATGGGTGGAGTCATGAGAGAAAAAGCCCCTCCCCATCCAGAAAAAGTTATGAAACGCAAAGCCAAACCACAGTGAAGAAACCGGAACCAAAGAGCTACAATCGAGAGAGCCGACACAGTTCCCCAAGTAGAGGCCATCACCAAAACCCTGGTACATCATCACTTCGTAAGTCCACAACAAGCCAGTCCTTGTCAAAACGTGGTTCCGAAAGTCGCAGTCCCTCCCCCTTAGCTCATAGCCAGTCTCCTCCTTGCAAGTCAGAGAGTGGGCGGAGGCCCTCTTTGTCTACATTGAGGCGTGAGATTACAGACCACGCACCTCTGAGGAACACTGTGAGTAGCTCCGCCTCTTACGTAAGAAACACCAATACTAGCCAATCACAGCACGATTCATCTGGACGCTGGAGAGGCTCCGCCCACTCTCTTCACAGCCAGTCAGTATCGCGAAACTCCTCCCCTTCACGCCATGCCAGTGAGAAGAAACCAGCTAGCTCCTGTATGAAATCCGCCTGGGAAACGCCACGAGACGGAAGCAAGAGGAGCAGCATGAGGCAGAACCTGGAAGCACAGAGCTCCACATCTGACAGCCGACGACACAGAAGCCCCTCGCCTCCGGTCCAAAGACACACATCTTCTCAGAGCTCCATGGACTCCGAGTCGAGTCACCTCTCGGCTGGGTCATCAGGTCTCAACCGGGAGGAGTATGCCATGATGGCTGACCTTCCCAAGGTCAAAACGGTCTTCCAGAGGGACGGTCCAAGCCACCTGAGGAAGATGGAGAGCAGGCAGAAACGAGAGCTTTCCCGCTACAAACCAGCCAGTCACTCTCAGAGCAAAGCTCCTTCTGAATGGGATGAACTTGAGGATGACAGAGACAGTGGTACACTATCAAGGGCTCACTCATCCAGCTCCCTACACACACaggtaaataaacacacacacatcctgtgGCATTCATACAATCATAATGGTCATTCAGTTCTaagtaagaaatgttttaagtATTATATTTAACCGGCCTATGACATTACACTGTTAGTGTACAAGAAAAACGATACACCATTCTTGAATAGTTCAATCCAGCCATTATGAGAGTATCTTATCCTGAAACACCTCACAGTGTGTGTCTCGTGTTTACACACACGCCTGCCGAGGTCTGAGAGTTTTAACCTGTGTGTCAGCTGCCCTGG
>XM_043233966.1
TTATTTGGAACaagaaataattacaaatgatgAAGAACTgtgttattttgtaaaacatttgcaCAGTTGCTGACATTAGAAACCCATCCTGACAAGTAGAAACCCAGCTTTAGTATAACACGTTTACGGTCAATGAAtctttaaaggtgcagtatcCTTCTATTCTGATGCCTCAGCGTTCCATGAGAACACAGATCAGTTCAGTTGTATGTGCTGCTGTTTGATTGGCCACCTGTGTTCCGTCCACCTATCAGGATGACTCAGATGTGCTGTCAGTGGTTAGCAGCTACTGTGATGTCAGCAGAGGAGGGCGTGGCTTTGATGACGGCTCCCTCTGCATCTTGAGCCCGGACTGTGACCTCTACCTGTGTGACGGAGACGACGACCAAAGCTCGGACAGGTAAGAGTGCTTAAGAGCTTCCACTcgttttttttcacttgttaTTCTACACTCTGATTGGCATGTCAGGTCTGTGCTGTCGTTATAATGTTTATCTTgtattaaattagtttaattgCATACCTTGCTCTAAGCATGTGTTTTGTGTCATATCCTAGTCTTCGCTTATATATCTTTAATCCCAGTCAGGGTGAGGATTCCATTTACAGCAGCTCTGCAGGAACAGAGGAATACTCCAACAACCTTCATCATCCTTCATCTTGCCATAGAATGACCCGCTTGGATCCGCCACCGTACCGGGCGAGCCCCCGAGGATGGACAGAGGTGTCCCAGAGTCGCCACGATGGTCTTGGGCAGTTCAGTGCTTCTCACTGTGAGGAAAACACCAATATCCGGTTACCAATCGAGCAGCTTGTGGTGTTGTTCTGATGGTTAGAGTGGCAGTTTGAGGTGTCAGGTGGTGTTGGGTTGCACTGGGCTTTTCCTTAGCGCTGCGTCACGGTGCACGAGTGCAGTATCATTTCATGTATTAACACAGGTCATGATCTTGTCTCTCTGTCCGTAGGCAGCCAGAAAGAACGAAGGGAACGGGAGAGTGGATATTTCTCTCTGGGAAGGGCTGCAGGCAGCAGAGCCTTCCGTGAGCAAAGCCCTCCCTATAGGCATTCAGAGAGAGGGCATCCCCTGCCAAGCAACAAAAGCCCTGAACTCAAAGCCACCATTCCATTTCGAAATCCGGATCTGGGTGTCCCTTCAGAAAGGAGGACCTCTGAGTTTCAGAATGTTGAGCAGATTGAAGAAACCTATCCTCCAGAGCCAGTGGATCTCAGCCTGGAGGTCGAGGCCCTCGCTGGCCCCCGGGCCCTGAGTCCCACCCCCTTCAAACAAGCTGAATCATTTGGCGGCTCCAGTCGAAGAGCTGGACGAAATTCCCACACATCTCCCACACGGCTGTCAGGAATGCTCGATTCTTCCAAAAGAGGGTCTGTTCTCTCCCGCTCATCCTCTCCCTCCTCGTTCAGACGGGCCGAGTCTAGCTCCTCTCTCAACACGGTTGGCTTTCGATCAGTTTCACATGGACAAGATAGGACACCTGTCACTCCGGCACGAAACAGCTACTCCGGAAACCTCCGCTCATTTGCAGGCACTGTCAGTAGCATTAAtaagtctctctctcacatggATCTGAGAGGCACTTTACGGAAACCTGAGAACAATAGTTCCTTCCCAGAGAACCGTGGAAGCTCGTCTCCTTCCAGACGGAGTTATGAAGGTCCTGCTGTGaggaaaactgaaacaaaaagccCTGGTCATGACAGACAAAGTTCCTTCTCCCCAGTGGGACGCTATGATTCAAGAACTCAGTCCCCTTCCAGATGGAGTTCTGATAGGAAAACTGAGACAAAAAGTCCTTCATATGAGCGCAGTCCTGACAGACAGGGattctcctcctcatcctccttaAAGAGCCGCTATGATTCCCGAAGTCAGTCCCCTTCCAGACAAAGTTACGATaggaaaactgaaacaaaaagccCTTCATATGAGCGTGGTCTTGACAGACAGGGATTTTCTTCCTCCTCCACCTTGAAGAGCCGCTATGATTCCCGAAGCAAGTCCCCTATGGGGAGGATGGAGACCAATGGTGTATCAAGTCAGATTCAAGAGGGTCGGCGCAGTGCATCTCCAGTCAGAAAGGGCTATGGAACACTAAGTCAATCAGATCGAAGGTCAATATCTAATGGGTGGAGTCATGAGAGAAAAAGCCCCTCCCCATCCAGAAAAAGTTATGAAACGCAAAGCCAAACCACAGTGAAGAAACCGGAACCAAAGAGCTACAATCGAGAGAGCCGACACAGTTCCCCAAGTAGAGGCCATCACCAAAACCCTGGTACATCATCACTTCGTAAGTCCACAACAAGCCAGTCCTTGTCAAAACGTGGTTCCGAAAGTCGCAGTCCCTCCCCCTTAGCTCATAGCCAGTCTCCTCCTTGCAAGTCAGAGAGTGGGCGGAGGCCCTCTTTGTCTACATTGAGGCGTGAGATTACAGACCACGCACCTCTGAGGAACACTGTGAGTAGCTCCGCCTCTTACGTAAGAAACACCAATACTAGCCAATCACAGCACGATTCATCTGGACGCTGGAGAGGCTCCGCCCACTCTCTTCACAGCCAGTCAGTATCGCGAAACTCCTCCCCTTCACGCCATGCCAGTGAGAAGAAACCAGCTAGCTCCTGTATGAAATCCGCCTGGGAAACGCCACGAGACGGAAGCAAGAGGAGCAGCATGAGGCAGAACCTGGAAGCACAGAGCTCCACATCTGACAGCCGACGACACAGAAGCCCCTCGCCTCCGGTCCAAAGACACACATCTTCTCAGAGCTCCATGGACTCCGAGTCGAGTCACCTCTCGGCTGGGTCATCAGGTCTCAACCGGGAGGAGTATGCCATGATGGCTGACCTTCCCAAGGTCAAAACGGTCTTCCAGAGGGACGGTCCAAGCCACCTGAGGAAGATGGAGAGCAGGCAGAAACGAGAGCTTTCCCGCTACAAACCAGCCAGTCACTCTCAGAGCAAAGCTCCTTCTGAATGGGATGAACTTGAGGATGACAGAGACAGTGGTACACTATCAAGGGCTCACTCATCCAGCTCCCTACACACACagAGAGCGAGCAGTCCGACCGCGGATCAGACACAGTCCAGCAGAAACCCATCCAGAGCGTCAGGACAGAACCAGGTACAGTAATACCTCTGTCCACCTGCGGAGGCGCTGTAGTCCCAACCCTGTTCACCAGGTGTGTATTTGTTCTGCAGAAAGCGCACAGACCATCGGTGTATTTCTCCTGCAGCGTGGATCAGACCGATGAAGAACCAATGCAACAGGCACGTCATAAAAACAGTCACCATTCAAGAGATCAATCACCGACTAATTAATatctctgtcatcatttactcaacattATGGccttttgcatcacaggaagtATTCCGTAGTACCCAAACTAACTGTGGTAATACTCTCCTTTTGTAGGCTGTGCACAAATGACATTGCTGTCAACCAGCTTACGTCACTGCTTAGTATCCACTGTAAGTGCGAATGCAAGTAATAGTTTGCACAAAATCGCCCTAGTACCCTATTTTTTAGTTCTAGAACTAATCTGTAAAGGccatgtttatttgcatgcgCTCAAAGAAATCAAATCTGACTTTGACAAATGTGCTTTCTGCCGTCTCTCTTTGTGAACGTGAGCGCAAAACAGTCTTTACTTTAACAAACATTAACAATATCTCTATAGAGAGTAAATACATACTTGAATGAATCAATTCAAGTGTAAAACAAGTATTTTCAGATTGTGTAATCCATATgaaacatgcatacatgcatcaCTAAGGAGATGACAAGTCAGTACTTGTCGACGACTGTAAAAGAAATCAttactttatcaaaatattaaacattaatgcaGTCTGCTTACAGTTTTTCACTGATACATCACTTCTGCCAGTGCCTTGTGGCAAGCTTTGTGTGTACACTTGAGCGCTTATTAGGATAAATGCTCATAATAATGATTTGAATGGCTTATTAATAACTGTGTGATTAGTCAATTAATGCTTAAAATGATTGACTAATGGTTTACCAGAAAAATCCTTAATCGGGGAAAGCCCTATTTTGTAGCACAAATATCCAAAAGCATTGGGATGCATTTGCTTGACtagcaataaaaacactgtcaaTGCCATTCAATtaagataaattaataatttattaagtcTGGAACTAAGTTTTAGCATTCATATTCCAGTGAGAGCCTAGAACTAAAGTACTTCAGTAAAAGCCGATTGAATGGGTCagttctgattggttgctgaGCTGCGCCACGCGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233964.1 False 3330 mRNA 0.50 2 8184548 8188044
XM_043233966.1 True 4285 mRNA 0.47 3 8184548 8189293

Neighbor

gene id symbol gene type direction distance location
nol12 nol12,LOC107676179 coding upstream 2811 8178514 ~ 8181737 (+)
srebf2 LOC107574638,LOC107745393,LOC107721684,LOC107572757 coding upstream 18171 8155371 ~ 8166377 (+)
LOC122331730 NA coding upstream 206658 7974543 ~ 7977890 (+)
ptger1c ptger1c,LOC107757344,LOC107567231,LOC107672434,LOC107670435,LOC107711161,LOC107587998 coding upstream 376786 7801296 ~ 7807762 (+)
LOC122334406 LOC107587953 coding upstream 387895 7786116 ~ 7796653 (+)
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding downstream 160 8189453 ~ 8200478 (+)
ndufa6 ndufa6 coding downstream 12306 8201599 ~ 8207081 (+)
poldip3 poldip3,LOC107661083,LOC107580331,LOC107714893,LOC107666602,LOC107579899 coding downstream 30631 8219924 ~ 8227354 (+)
rrp7a LOC107673310,LOC107591059 coding downstream 38491 8227784 ~ 8229614 (+)
wbp2nl wbp2nl,LOC107569878,LOC107661077,LOC107670540,LOC107749952,LOC107568364 coding downstream 106839 8296132 ~ 8300760 (+)
G17990 NA non-coding upstream 39523 7984480 ~ 8145025 (+)
G17998 NA non-coding upstream 74779 8015637 ~ 8109769 (+)
G18016 NA non-coding upstream 81131 8103050 ~ 8103417 (+)
G17993 LOC107566823,LOC107739961,LOC107574374,LOC107576777,LOC107659785,LOC107565530,LOC107742984,LOC107710146,LOC107725412,LOC107717634,LOC107655767,LOC107571898 non-coding upstream 92306 7989126 ~ 8092242 (+)
G17976 LOC107744976,LOC107711219,LOC107599314 non-coding upstream 260919 7915862 ~ 7923629 (+)
G18010 NA non-coding downstream 25959 8215252 ~ 8217217 (+)
G18025 fam234b,LOC107576065 non-coding downstream 27231 8216524 ~ 8217031 (+)
LOC122331402 NA non-coding downstream 123096 8312389 ~ 8314490 (+)
G18055 NA non-coding downstream 285000 8474293 ~ 8490417 (+)
G18092 NA non-coding downstream 482368 8671661 ~ 8675886 (+)
LOC122341282 LOC107690132,LOC107722730,LOC107572760 other upstream 31654 8150743 ~ 8152894 (+)
G18008 LOC107572757,LOC107745393,LOC107676178,LOC107574638,LOC107690127 other upstream 124691 8056659 ~ 8059857 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other upstream 218354 7964749 ~ 7966194 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other upstream 221572 7960071 ~ 7962976 (+)
G17985 ighv4-5 other upstream 233184 7950854 ~ 7951364 (+)
LOC122342110 wbp11,LOC107751605,LOC107678993 other downstream 70791 8260084 ~ 8563379 (+)
G18048 NA other downstream 324056 8513349 ~ 8742302 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other downstream 354998 8544291 ~ 8551151 (+)
LOC122341292 LOC107729471,LOC107687638 other downstream 791298 8980591 ~ 8988810 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other downstream 820757 9010050 ~ 9012178 (+)

Expression


Co-expression Network