ndufa6 (ndufa6)


Basic Information

Item Value
gene id ndufa6
gene name ndufa6
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8201599 ~ 8207081 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233971.1
ACTCGCGCGTGCGCAGAGCAGCGGCGGAGTTTAAAGATGGCGTCCAGCGCAGCGACTCGAACCGGAGCCGCCGCCGCTAAAGTCGTTAAACCGATCTTCAGCCGCGACCTGAATGAAGCCAGGCGCAGGGCGCGCGAGCTCTACCGGGCCTGGTACCGAGAGGTGCCCAACACagtgcACTCGTTCCAGCTGGACATCACGTCTCGTCAGGGACACGAGAAGCTGAGGGAGATGTTTGACAAGAACCGTCACGTGACTGACCCCAGGGTCATCGACATGCTGGTCATCAAGGGGAAGATGGAGCTGGAGGAGACCATCAACATCTGGAAGCAGAAGACACACATCATGCGCTACTTCCACGAGACTGAGGTTCAGCGTCCCACCGACTTCCTGTCGAAATTCTACCACGGACACGacccctgacctctgacccctgaccTCTGAAGTGTGTTGTGATTTCCTGCTTCTAGACTGTAAATATACACTGATGCTGAA

Function

symbol description
ndufa6 Predicted to be involved in response to oxidative stress. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 33. Orthologous to human NDUFA6 (NADH:ubiquinone oxidoreductase subunit A6).

NR:

description
NADH dehydrogenase 1 alpha subcomplex subunit 6

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0070469 respirasome cellular_component

KEGG:

id description
K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233971.1 True 495 mRNA 0.57 3 8201599 8207081

Neighbor

gene id symbol gene type direction distance location
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding upstream 1121 8189453 ~ 8200478 (+)
LOC122339678 NA coding upstream 12306 8184548 ~ 8189293 (+)
nol12 nol12,LOC107676179 coding upstream 19862 8178514 ~ 8181737 (+)
srebf2 LOC107574638,LOC107745393,LOC107721684,LOC107572757 coding upstream 35222 8155371 ~ 8166377 (+)
LOC122331730 NA coding upstream 223709 7974543 ~ 7977890 (+)
poldip3 poldip3,LOC107661083,LOC107580331,LOC107714893,LOC107666602,LOC107579899 coding downstream 12843 8219924 ~ 8227354 (+)
rrp7a LOC107673310,LOC107591059 coding downstream 20703 8227784 ~ 8229614 (+)
wbp2nl wbp2nl,LOC107569878,LOC107661077,LOC107670540,LOC107749952,LOC107568364 coding downstream 89051 8296132 ~ 8300760 (+)
LOC122341286 NA coding downstream 286340 8493421 ~ 8494226 (+)
LOC122341287 LOC107758354,LOC107569871 coding downstream 286614 8493695 ~ 8498279 (+)
G17990 NA non-coding upstream 56574 7984480 ~ 8145025 (+)
G17998 NA non-coding upstream 91830 8015637 ~ 8109769 (+)
G18016 NA non-coding upstream 98182 8103050 ~ 8103417 (+)
G17993 LOC107566823,LOC107739961,LOC107574374,LOC107576777,LOC107659785,LOC107565530,LOC107742984,LOC107710146,LOC107725412,LOC107717634,LOC107655767,LOC107571898 non-coding upstream 109357 7989126 ~ 8092242 (+)
G17976 LOC107744976,LOC107711219,LOC107599314 non-coding upstream 277970 7915862 ~ 7923629 (+)
G18010 NA non-coding downstream 8171 8215252 ~ 8217217 (+)
G18025 fam234b,LOC107576065 non-coding downstream 9443 8216524 ~ 8217031 (+)
LOC122331402 NA non-coding downstream 105308 8312389 ~ 8314490 (+)
G18055 NA non-coding downstream 267212 8474293 ~ 8490417 (+)
G18092 NA non-coding downstream 464580 8671661 ~ 8675886 (+)
LOC122341282 LOC107690132,LOC107722730,LOC107572760 other upstream 48705 8150743 ~ 8152894 (+)
G18008 LOC107572757,LOC107745393,LOC107676178,LOC107574638,LOC107690127 other upstream 141742 8056659 ~ 8059857 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other upstream 235405 7964749 ~ 7966194 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other upstream 238623 7960071 ~ 7962976 (+)
G17985 ighv4-5 other upstream 250235 7950854 ~ 7951364 (+)
LOC122342110 wbp11,LOC107751605,LOC107678993 other downstream 53003 8260084 ~ 8563379 (+)
G18048 NA other downstream 306268 8513349 ~ 8742302 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other downstream 337210 8544291 ~ 8551151 (+)
LOC122341292 LOC107729471,LOC107687638 other downstream 773510 8980591 ~ 8988810 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other downstream 802969 9010050 ~ 9012178 (+)

Expression


Co-expression Network