kat8 (kat8,LOC107582998,LOC107658503,LOC107729500,LOC107689650,LOC107554120)


Basic Information

Item Value
gene id kat8
gene name kat8,LOC107582998,LOC107658503,LOC107729500,LOC107689650,LOC107554120
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12174276 ~ 12177729 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234060.1
GCGCGAGTGAACGCGGCGTGCGCAATGTTTTCAAATGGACAAAGATGTCTGGCGTAGCGATGTCGTTGTCCAATAATCGCCACGCAAACATGAACAATTCGTACGATAACTGCGGTTCAGAAGAGCGAATGGATGTTGAAATAGACGCTGGTCACGCTGGAACCGACCGGGGAAGCTTGGAGACGGGAACAAGAGCGACATGTTCTTCAAACGGCAGTGGCGGGGAAGAGGATGAGGTAGAGGCCGCTATTCGAGAAAGAGAAGCCGCGGGCTCGAGTACTCCGCCCTCCGCGGATGGAGTGTCGCTCGGCGGCGGCAGAGAGCAGGAGGTGTCAGTAGAAATCGGCGAGACTTATCTGTGTCAGCGTGCGGACAAAACATGGCATTCAGCAGAAGTTATTCAGTCCAGGCTCAATGAGCAGGAAGGCAGAGAAGAGTTTTATGTCCACTATGTAGGATTTAACAGACGTTTAGATGAGTGGGTTGGAAAGGCTCGTTTGGCACTGACAAAGACTGTGAAAGATGCAGTGAGAAAGAGTGTGGAGGAAGGTGGTGGAGGTGAACTTGTGGACCAGCCAGAAAGGAAGATCACCCGAAACCAGAAGCGTAAACATGACGAGATCAACCACGTTCAGAAGACTTATGCAGAGATGGACCCCACCACAGCAGCCCTGGAGAAAGAGCATGAGGCGatcacaaaagtaaaatatgtgGACAAGATCCAGATCGGGAACTTTGAGATTGATGCATGGTACTTCTCTCCGTTCCCTGAGGACTATGGGAAACAGCCCAAGCTTTGGATCTGTGAATACTGCCTGAAGTATATGAAGTATGAGAAGACATTCAGATACCACCTGTCACAATGTCAGTGGCGTCAGCCTCCAGGAAAAGAGATTTATCGCAGAAACAATATCTCAGTATATGAGGTTGATGGGAAGGACCACAAGATCTACTGTCAGAACCTGTGCCTCCTGGCAAAGCTCTTTCTGGATCACAAAACACTTTACTTTGATGTAGAGCCATTCATCTTCTACATCCTcactgaagtcaacaaacagggAGCACATATTGTGGGCTACTTCTCTAagGAGAAGGAGTCTCCAGATGGGAACAATGTTGCTTGTATTCTCACTCTTCCTCCATACCAGAGAAGAGGATATGGAAAATTTCTAATTGCATTCAGTTATGAGTTGTCTAAGCTGGAGAGTACTGTGGGGTCTCCAGAGAAGCCTCTATCAGATTTGGGAAAGTTGAGCTACAGGAGTTACTGGTCTTGGGTATTACTAGAGATTCTGCGAGACTTCAGAGGGACCCTATCCATCAAAGACCTCAGTCAGATGACAAGCATTACTCAGAGTGACATCATCAGCACACTACAGTCTCTGAACATGGTCAAGTACTGGAAAGGTCAGCATGTCATCTGCGTCACACCAAAACTTGTAGAGGAACATCTCAAAAGTGCCCAGTACAAGAAACCACCAATAACAGTGGACACGCATTGTTTGAAATGGGCACCACCCAAACACAAGCAGGCCAAGTTCTCTAAAAAGTGAACGTCGCGGAAATGAAGAGAGTGAAATTTGTCCTTTTCACCCAAGATGTTTTTCACCGCTAACCTAAATGTCATGTAGAAAGGACTAAGATTGTACATTCGCATTATAATaagtctgttattttttttaaataaatgaatagtaaTATTCATGTCA

Function

symbol description
kat8 Predicted to enable histone acetyltransferase activity (H4-K16 specific); histone binding activity; and transcription coregulator activity. Acts upstream of or within primitive hemopoiesis. Predicted to be located in nucleus. Predicted to be part of MSL complex. Orthologous to human KAT8 (lysine acetyltransferase 8).

NR:

description
histone acetyltransferase KAT8-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function

KEGG:

id description
K11308 MYST1, MOF, KAT8; histone acetyltransferase MYST1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234060.1 True 1709 mRNA 0.46 11 12174276 12177729

Neighbor

gene id symbol gene type direction distance location
rnf25 rnf25,LOC107729499,LOC107658504,LOC107582997,LOC107689710,LOC107554089 coding upstream 402 12168881 ~ 12173874 (+)
si:dkey-16l2.16 si:dkey-16l2.16,LOC107729502,LOC107554119,LOC107658507,LOC107730777,LOC108427354,LOC108280555 coding upstream 5545 12163610 ~ 12168731 (+)
thoc6 thoc6,LOC107729483,LOC107583000,LOC107689651,LOC107730738 coding upstream 11635 12159182 ~ 12162641 (+)
srrm2 LOC107729482,LOC107583001,LOC107554117,LOC107689653,LOC107730748 coding upstream 15675 12149797 ~ 12158601 (+)
mmp25a LOC107730750,LOC107689654,LOC107729415,LOC107658423,LOC107554116 coding upstream 25145 12145111 ~ 12149131 (+)
si:dkey-16l2.17 si:dkey-16l2.17,LOC107582999,LOC107729501,LOC107658439,LOC107737763,LOC107689709,LOC107554090 coding downstream 1494 12179223 ~ 12182498 (+)
fus fus,LOC107658502,LOC107554122,LOC103040960 coding downstream 5522 12183251 ~ 12192143 (+)
setd1a LOC107729457,LOC107658500,LOC107737760,LOC107582993,LOC107554121 coding downstream 16249 12193978 ~ 12215690 (+)
hsd3b7 hsd3b7,LOC107582995,LOC107658501,LOC107729456,LOC107737759,LOC107554123,LOC107689649 coding downstream 38882 12216611 ~ 12230379 (+)
cd2bp2 cd2bp2,LOC107582988,LOC107729467,LOC107554127,LOC107737770,LOC107683307 coding downstream 76129 12253858 ~ 12259180 (+)
G19274 NA non-coding upstream 39319 12132629 ~ 12134957 (+)
G19263 NA non-coding upstream 55501 12118538 ~ 12118775 (+)
G19257 NA non-coding upstream 99773 12074231 ~ 12074503 (+)
G19255 NA non-coding upstream 101203 12072719 ~ 12073073 (+)
G19208 NA non-coding upstream 200270 11967648 ~ 11974006 (+)
G19287 NA non-coding downstream 50206 12227935 ~ 12228520 (+)
G19579 NA non-coding downstream 503529 12681258 ~ 12681565 (+)
G19575 LOC107690704 non-coding downstream 505089 12682818 ~ 12686371 (+)
G19656 NA non-coding downstream 819488 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 828081 13005810 ~ 13096854 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 56337 12114048 ~ 12117939 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other upstream 73424 12092603 ~ 12100852 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other upstream 124854 12027149 ~ 12049422 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other upstream 280620 11885655 ~ 11893656 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 340352 11773200 ~ 11833924 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 54698 12232427 ~ 12249997 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other downstream 125635 12303364 ~ 12315046 (+)
G19326 NA other downstream 334197 12511926 ~ 12513721 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other downstream 342108 12519837 ~ 12528803 (+)
LOC122332158 LOC107583070,LOC107737766 other downstream 657652 12835381 ~ 12987913 (+)

Expression


Co-expression Network