LOC122340641 (LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642)


Basic Information

Item Value
gene id LOC122340641
gene name LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3928348 ~ 3938422 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234139.1
CCACCCCCCCCaaccctttctctctctctctctctctgtctctctcacacacacacacacacacactcactctcttcCTCACATCCCTGCCTCTCTTCCCATCACATCGCCGGCTTCCTCGCCTCTCCTCGTCTGTGTCTCTGCCTCGCAGTCGTCCTCCGGCTCCCACACGTGTCAGCCGGCTCTTCCTCTGCGGTCGCAGGCTGTGGTTCGTCTTCTCTCCGGCGCTCGAAGGAGGGCAGAAAGGCCATGGAGCACAGCCACATCTTCACCGTGCTGTCCACCAACTCCAGTTCTTGGAGTCCTCGCGGTTGTCCTCTCGGACAGTTTCCCGTCATCTACTACAGTTCCTTGCTGTGCCTCGGCCTGCCTGCAAACATCCTCACCGTGATCATCCTTTCTCAGCTGGTGCTGCGGCGACAGAAATCGTCCTATAACTACCTACTGGCCCTGGCCGTAGCCGACATCCTGGTCCTGCTGCTGATCGTGTTTGTGGACTTCTTGTTGGAGGACTTCATTCTCGGAGCGCCTCTTCCCCACTCCCTTAACAAAGCGGTGCAGGTCCTGGAGTTCTCCTCCATCCACACCTCCATCTGGATCACGGTTCCCCTGACCGTGGACCGCTACATCGCTGTATGCCATCCTCTGCGCTACCACACAGTCTCCTACCCGGCCCGAACTCGCAAAGTGATCTTGGCGGTGTACGCTGGCTGCCTGATCACCAGCGTCCCGTATTACTGGTGGCCGGAGCTGTGGCACGGACTGCCAGGAGCGAGCTCCGGCGGCCGCAGTAGCAGCGCAGGCCAGCATGTGTTGGTTTGGGTCCACTGTGCGACGGTTTACCTGCTCCCCTGCTCTGTTTTCTTCTCGCTCAACGCCATCATCGTACGCAAGCTTCGCTGCCGTCGTAGCTGCTTCCGTCTGCGAGGCTACTCGACCGGAAAAACCACAGCCATCCTGCTGGCCATCACCTCAGTGTTCGCTGTGCTTTGGGCGCCACGCACCCTTATGATCCTTTACCACCTTTACACGGCCCAACCGCCGACCCCTGGACCGGCCAGGCTCCTGCATTTGGTCACAGACGTGGCGAACATGCTGGCGCTTCTCAACACTGGCGTCAACTTCTTCCTGTACTGCTTCATCAGCAAGCGTTTCCGCAGGATGGCCGGCACGGTGCTAAAGGCCCTTTTCCGATGCAGGAAGCAGCCGCCGCCATTTTACGCCAGTCACAACTTCTCCATCACCAGCAGCCCTTGGATCTCACCAGCCAACTCACACTGCATCAAGATGCTGGTGTACCAGTACGACAAGAACGGCAAACCAGTCTGCATATCCTCATGAATACCAAATCGAATTATGCCGTACCAATATAACGCTGGCTACTAAGTCCGGCGAGCTTGGGAAAAGTCCTTCCCGACTGGTGACCAGCAGAAGGCGGCGATCAGTTTGTTGGAAAGTGCCTCAACGAAAGATCCAGTGTCAGGTTCAAAGACATCTTACGGCCAAATTGTGGTTCTTTCTCTGGCAAAAAACAAGCAGGAGTGGTCATTAAGCTATAACATGCCAGCGCCTTTCAGGATatcaatgcaaaaaacaaaaaaagaccaaatCTCAAAGTCAAGAGAATTCATGAAAGGCTTGCTCGTGTTCCAGGCAAAGACAAGGCAATTAGACCAATATACTTATTGATGTGATCTAAAGAGTTTGTCTCTagtagggctgggcaatataaaaaatgcatatctcaatatttttcaaattaatgatATCCGTTAATTTGTAAATACTTTTGCAGCATTCGCTGCTGATGAATTTAAAAAGTTGGGCTTTTTTGCCCTTGTGGAAATTAGTATTTACATCACATTTACGAATTATGAGTAATGACATTATAGCGAAAGCTCTTCTCAAAGCACTTCCGATTAGTATTTCAAAGCCTGCATAACAGCAGCCATATTCACCAAATATAAACTAAACCCTGTATATTACCATTGGTATACGTAATATTCCCTTAGTTTTTATCGTCAGCAAAGACGAAGCGATAATATCTCCAATTTTTGATgtatcgcccagccctagtcTGAGCATGGTTCCAGTTGAATGTGcaccaaagcaacattttacatgaagaaaaaggaTTCAAAGCCGGAGCCAAGGCAATGTTACCGTATGTCAACCACCTTTCCCCTCTCACCTTCTCAGCAGGGAGACAGAGCTCTCCTTCCCTTTGTGACATTAAAAAACCGTCCTGGCATTTTCGTTTAATATGCTGTTGGTCTCCAAGAGCCGGTTTGCAAACAGCACAAGCTCTTATTAAAGAATCAAGCCTTTAGACATGCTCAGTGCTGGAAACCCGCTTTCCTATTGCTGCCCGATGAAGAATGCTCAAAGATTTCCGCTTCAGCAAAAAGCTTCTGGTGCAACTGACTGTTAAGTGTACAACGAAGGCAAAAAAATACCTTTAGAGAAGAATTATTCTTTATCGGTTGAATCAATATTCTAAGCAACGTCGACACTCATTGCTCAGTACATGAACAGATTTTCTATCGCGGTGACAAACACTAAATAATTAAGACTTTTCAACTTCTGCCACACGCGTACACGCACACTCATTTATCTTTGCTGGGCAGCctcaagaaaaaagaaagcgaaaaagagaatgcttttcaaataaaatcaatggcTGTCTCCAGAGTGAGCTA

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 139

GO: NA

KEGG:

id description
K08428 GPR139; G protein-coupled receptor 139

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234139.1 True 2699 mRNA 0.49 2 3928348 3938422

Neighbor

gene id symbol gene type direction distance location
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding upstream 11912 3912009 ~ 3916436 (+)
sstr5 sstr5,LOC107601569,LOC107695669,LOC107673199,LOC107716263 coding upstream 26899 3895268 ~ 3901449 (+)
mrps7 mrps7,LOC107695700,LOC107673207,LOC107724659,LOC107579769,LOC108262546 coding upstream 50481 3875326 ~ 3877867 (+)
tmem220 tmem220,LOC107570714,LOC107579199 coding upstream 97029 3829649 ~ 3831319 (+)
tmem100a tmem100a,LOC107601598,LOC107710980,LOC107696362,LOC107695692,LOC107718941,LOC107567563 coding upstream 438297 3486152 ~ 3490051 (+)
LOC122333504 LOC107695702,LOC107724673,LOC107601588,LOC107673211,LOC107553654,LOC107716264 coding downstream 9410 3947832 ~ 3950655 (+)
cfap70 cfap70,LOC107735674 coding downstream 183337 4121759 ~ 4134915 (+)
hmox2b LOC107601585,LOC107742125,LOC107695708,LOC107553648,LOC107718627,LOC107678258 coding downstream 197448 4135870 ~ 4145083 (+)
coro7 coro7,LOC107601580,LOC107715621,LOC107553663,LOC107695655,LOC108276516,LOC108431934 coding downstream 216648 4155070 ~ 4274967 (+)
pam16 pam16,LOC106601835,LOC107695711 coding downstream 336776 4275198 ~ 4276673 (+)
G16651 NA non-coding upstream 45643 3881900 ~ 3882705 (+)
G16639 LOC107570712,LOC107573119,LOC107663479,LOC107553614,LOC107750165,LOC107673185,LOC107716258 non-coding upstream 67063 3838870 ~ 3861285 (+)
G16619 NA non-coding upstream 106921 3800652 ~ 3821427 (+)
G16623 NA non-coding upstream 123837 3745907 ~ 3804511 (+)
G16598 LOC106601484 non-coding upstream 330145 3594677 ~ 3598203 (+)
G16664 NA non-coding downstream 6179 3944601 ~ 3945039 (+)
LOC122341104 NA non-coding downstream 49104 3987526 ~ 3991553 (+)
G16675 NA non-coding downstream 80111 4018533 ~ 4023201 (+)
G16685 NA non-coding downstream 80825 4019247 ~ 4019689 (+)
G16686 NA non-coding downstream 85776 4024198 ~ 4035062 (+)
LOC122332297 NA other upstream 115004 3809170 ~ 3813344 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 401434 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 605294 3320820 ~ 3323054 (+)
G16530 LOC107601546 other upstream 644692 3282990 ~ 3283656 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other upstream 1281592 2641146 ~ 2646756 (+)
G16667 NA other downstream 9201 3947623 ~ 3985611 (+)
G16672 NA other downstream 31093 3969515 ~ 4033526 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 418610 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 498866 4437288 ~ 4438201 (+)
G16979 NA other downstream 520276 4458698 ~ 4462274 (+)

Expression


Co-expression Network