hmox2b (LOC107601585,LOC107742125,LOC107695708,LOC107553648,LOC107718627,LOC107678258)


Basic Information

Item Value
gene id hmox2b
gene name LOC107601585,LOC107742125,LOC107695708,LOC107553648,LOC107718627,LOC107678258
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4135870 ~ 4145083 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234236.1
GCGCCGACAGACACGTGGTTTCATCCGGCAGCTTCCTGCTTTGAGTTCGTAACGGAGAGCCAGATCTCCGCGGACAAAAGCAACGAGAATCCGGCCGACTCTCGCTTCCGCAACCCGTTACCAGTCTGTCGTCGTTCCTGCAGCGTTATCAGTGACCtgagaGGTCAGGGATGAGCGCTGCGAGGACAGAAGATGCCGTCGACGGGAAGAGCGCCGCTAACGGAGGAGGACCGGTGCGTCCGGAGGGAGGCGTCACCATCCTCAgGCCTACGGATCTCTCAGAGATGCTGGCGGCGGGAACCAAAGACGTTCACGAGAAGGCCGAAAACACGGAGTTCGTCAAAGACTTTCTGAGAGGACGCATCCGCAAAGAGCTCTTTAAGcTCGGTCACGTGGCTCTGTACTTCACGTACTccgccatggaggaggagctggagagaAACAAGGATCACCCCGACCTGGCGGCGCTCTACTTCCCTCACGAGCTGCACCGGCGGGACGCTCTGGCTCGGGACCTGCAGTACTTCTACGGCGAGGACTGGCAGGACCAGACGGGCCCGTCTCCGGCCACCCGGCGCTACGTGGAGCGCATCCGGCAGATCGGCCGCGAGCAGCCCGCGCTTCTGGTGGCTCACGCTTACACCCGCTACATGGGAGACCTGTCGGGCGGCCAGGTGCTCAGGAAGGTGGCCCAGCGCGCCATGAAGCTGCCGGCCACAGGAGAGGGCCTGAGCTTCTACCAGTTCGACGGCATCCACAGCGCCAAGGCCTTCAAGCAGCTGTACCGCAGCCGGATGAACGAGCTGGAGCTGGACTCGCACACCAAGCAGAAGATCGTGGAGGAAGCCGTCCTGGCCTTCCACTTCAACATGGAGATTTTTGGAGAACTGGAGGAGGTTGGAAAAACCCTTGAGGACGATGTTTTGGACGCCGGTCCTGCTCACGGCGCTCACGGAGAGATGCAAGGAGACGTCAGCCAGTGTCCGTATTATGCGGCCAAGATGGCCGCCAGCGGGGGATCGTCTTACGTCTGTCAGATGGCCGTGACCATGCTTAGAAACCCCTCCGGTCAAGTCCTATTGGCTGCCTGGATCGCCGCTCTCGCCGGATTGGCCGCGTGGTACCTCATGTGATCTCCCGTGAGCCAATGAGAGAAAGGAAACGCTCCAATAACGGACGAGATCAAATGGTTTGCGCCGCTTTAAGGTCTTTGCGGCACCCCGAAGCATTTCCCTCTTAGCGCGTCCCGTTTGCCCCCTCGCTCGCGGGTGAACGTGATTTATTCTCCGTGTATGAACGTAGACTGTTTAAACGCAGGATAGCGTAGGGTTTTTACTGTCGCACCGGTCAGTGTTGATGAAGTCAAAAGAACGGGTCAGCCGTAAATCAAACTTTGAAAATGCCCTCATCCTCGGGCCGCTCGCTCTTCAACGGATTGCTCTGCAgagaatgggtgccgtcagaatcagtGCGAACGGCTTCAAAATCCACCAGCGGTTGTTTTTGGACCGTCTTTCTGTTTGATCTTTGCACAAGACGAGAGAAAGCGATGATCTTTATGGCTTTTCAAgttaaaaaatgatgcatttgtttctttcCTTTGCGTTTTTATTTCAAGACGTTAACCGACGGACTGTTTTTAGCGGCTGCTTTGaccctcattctgacggcacccattcgctgcagggCATCCGCTGATGAGCGAGtgatgcatttctccaaatcgaTTCTGATCTGTATCTTTTATAGCCGAACGGTGAGTAAATTTTCAGTTCGGGTCCACTCGTTTAAGGCTGGAGAAgagcttttatatatacagcattCACTCAGACGAGCAGTACTTCCGCTGAGAGTTCAGAACGTAAAAGACGGAGGGGCTCGCGCATTTTAAAGTCGTTTTTTGTGTTCTTGCGCTACGGGCTCGGCTTTCAGGGTCGTTCTACGCAGACGGTTTAAGCACAAGATTTTCCGGGTTTTCAATTTGCTTTTCATTTCGACACAATTTCTCCGAATTGTGGGtcaataaatcacttttattgcattttttttttttttttttt
>XM_043234242.1
TTAGTCACTGGCTGAGGTGGAGtgagaGGTCAGGGATGAGCGCTGCGAGGACAGAAGATGCCGTCGACGGGAAGAGCGCCGCTAACGGAGGAGGACCGGTGCGTCCGGAGGGAGGCGTCACCATCCTCAgGCCTACGGATCTCTCAGAGATGCTGGCGGCGGGAACCAAAGACGTTCACGAGAAGGCCGAAAACACGGAGTTCGTCAAAGACTTTCTGAGAGGACGCATCCGCAAAGAGCTCTTTAAGcTCGGTCACGTGGCTCTGTACTTCACGTACTccgccatggaggaggagctggagagaAACAAGGATCACCCCGACCTGGCGGCGCTCTACTTCCCTCACGAGCTGCACCGGCGGGACGCTCTGGCTCGGGACCTGCAGTACTTCTACGGCGAGGACTGGCAGGACCAGACGGGCCCGTCTCCGGCCACCCGGCGCTACGTGGAGCGCATCCGGCAGATCGGCCGCGAGCAGCCCGCGCTTCTGGTGGCTCACGCTTACACCCGCTACATGGGAGACCTGTCGGGCGGCCAGGTGCTCAGGAAGGTGGCCCAGCGCGCCATGAAGCTGCCGGCCACAGGAGAGGGCCTGAGCTTCTACCAGTTCGACGGCATCCACAGCGCCAAGGCCTTCAAGCAGCTGTACCGCAGCCGGATGAACGAGCTGGAGCTGGACTCGCACACCAAGCAGAAGATCGTGGAGGAAGCCGTCCTGGCCTTCCACTTCAACATGGAGATTTTTGGAGAACTGGAGGAGGTTGGAAAAACCCTTGAGGACGATGTTTTGGACGCCGGTCCTGCTCACGGCGCTCACGGAGAGATGCAAGGAGACGTCAGCCAGTGTCCGTATTATGCGGCCAAGATGGCCGCCAGCGGGGGATCGTCTTACGTCTGTCAGATGGCCGTGACCATGCTTAGAAACCCCTCCGGTCAAGTCCTATTGGCTGCCTGGATCGCCGCTCTCGCCGGATTGGCCGCGTGGTACCTCATGTGATCTCCCGTGAGCCAATGAGAGAAAGGAAACGCTCCAATAACGGACGAGATCAAATGGTTTGCGCCGCTTTAAGGTCTTTGCGGCACCCCGAAGCATTTCCCTCTTAGCGCGTCCCGTTTGCCCCCTCGCTCGCGGGTGAACGTGATTTATTCTCCGTGTATGAACGTAGACTGTTTAAACGCAGGATAGCGTAGGGTTTTTACTGTCGCACCGGTCAGTGTTGATGAAGTCAAAAGAACGGGTCAGCCGTAAATCAAACTTTGAAAATGCCCTCATCCTCGGGCCGCTCGCTCTTCAACGGATTGCTCTGCAgagaatgggtgccgtcagaatcagtGCGAACGGCTTCAAAATCCACCAGCGGTTGTTTTTGGACCGTCTTTCTGTTTGATCTTTGCACAAGACGAGAGAAAGCGATGATCTTTATGGCTTTTCAAgttaaaaaatgatgcatttgtttctttcCTTTGCGTTTTTATTTCAAGACGTTAACCGACGGACTGTTTTTAGCGGCTGCTTTGaccctcattctgacggcacccattcgctgcagggCATCCGCTGATGAGCGAGtgatgcatttctccaaatcgaTTCTGATCTGTATCTTTTATAGCCGAACGGTGAGTAAATTTTCAGTTCGGGTCCACTCGTTTAAGGCTGGAGAAgagcttttatatatacagcattCACTCAGACGAGCAGTACTTCCGCTGAGAGTTCAGAACGTAAAAGACGGAGGGGCTCGCGCATTTTAAAGTCGTTTTTTGTGTTCTTGCGCTACGGGCTCGGCTTTCAGGGTCGTTCTACGCAGACGGTTTAAGCACAAGATTTTCCGGGTTTTCAATTTGCTTTTCATTTCGACACAATTTCTCCGAATTGTGGGtcaataaatcacttttattgcattttttttttttttttttt

Function

NR:

description
heme oxygenase 2-like

GO:

id name namespace
GO:0006788 heme oxidation biological_process
GO:0004392 heme oxygenase (decyclizing) activity molecular_function

KEGG:

id description
K21418 HMOX2; heme oxygenase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234236.1 True 2060 mRNA 0.54 6 4135870 4145083
XM_043234242.1 False 1925 mRNA 0.54 6 4136479 4145083

Neighbor

gene id symbol gene type direction distance location
cfap70 cfap70,LOC107735674 coding upstream 955 4121759 ~ 4134915 (+)
LOC122333504 LOC107695702,LOC107724673,LOC107601588,LOC107673211,LOC107553654,LOC107716264 coding upstream 185215 3947832 ~ 3950655 (+)
LOC122340641 LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642 coding upstream 197448 3928348 ~ 3938422 (+)
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding upstream 219434 3912009 ~ 3916436 (+)
sstr5 sstr5,LOC107601569,LOC107695669,LOC107673199,LOC107716263 coding upstream 234421 3895268 ~ 3901449 (+)
coro7 coro7,LOC107601580,LOC107715621,LOC107553663,LOC107695655,LOC108276516,LOC108431934 coding downstream 9987 4155070 ~ 4274967 (+)
pam16 pam16,LOC106601835,LOC107695711 coding downstream 130115 4275198 ~ 4276673 (+)
tfap4 tfap4,LOC105021644,LOC107553667,LOC107695712,LOC107601578,LOC107715644,LOC107718566,LOC107661646 coding downstream 172576 4317659 ~ 4328198 (+)
srl srl,LOC107661647,LOC107718567,LOC107553668,LOC107695714 coding downstream 184603 4329686 ~ 4351760 (+)
LOC122340833 LOC107718621 coding downstream 325649 4470732 ~ 4479122 (+)
G16604 LOC107710983,LOC107695695,LOC107696365,LOC107718935 non-coding upstream 74320 3606172 ~ 4061550 (+)
G16693 abca3b,abca3,LOC107678264,LOC107718613,LOC107553624,LOC107742093,LOC107601545 non-coding upstream 92471 4042872 ~ 4043399 (+)
G16686 NA non-coding upstream 100808 4024198 ~ 4035062 (+)
G16675 NA non-coding upstream 112669 4018533 ~ 4023201 (+)
G16685 NA non-coding upstream 116181 4019247 ~ 4019689 (+)
G16883 LOC106606498,LOC106592966 non-coding downstream 4499 4149582 ~ 4150963 (+)
G16890 LOC107601582,LOC107695709,LOC107715639,LOC107718560,LOC107661641,LOC107553664 non-coding downstream 70780 4215863 ~ 4219429 (+)
G16897 NA non-coding downstream 170048 4315131 ~ 4315467 (+)
G16898 NA non-coding downstream 171753 4316836 ~ 4317051 (+)
G16956 NA non-coding downstream 266594 4411677 ~ 4441048 (+)
G16672 NA other upstream 102344 3969515 ~ 4033526 (+)
G16667 NA other upstream 150259 3947623 ~ 3985611 (+)
LOC122332297 NA other upstream 322526 3809170 ~ 3813344 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 608956 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 812816 3320820 ~ 3323054 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 211949 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 292205 4437288 ~ 4438201 (+)
G16979 NA other downstream 313615 4458698 ~ 4462274 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other downstream 325649 4470732 ~ 4546567 (+)
G16981 NA other downstream 760573 4905656 ~ 4906966 (+)

Expression


Co-expression Network