LOC122341263 (LOC107689064)


Basic Information

Item Value
gene id LOC122341263
gene name LOC107689064
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20470981 ~ 20473411 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234635.1
ACATGTCTTACTCTTGGAGTACCTTAAATTACAAGAGTGATCTTCAAGAAGAGAAGAATAGCTGTGGTTGTGACAAGAGAAAAAGCATCTACCAGATCAGCTGTCTGAAAGAGGAGTCAAAGAAAAGTTGTCCAAGTTCTCATTCTcagGGTCCTGAATGCCAAACCAACTCCAGTGACTCCAACTCCaacatattcaaaatacatCACTGCTGTTACTGCAAGCAGCCACATCACAGAATGATGGATCATCTTCAGTCAGTTCATCCTAATGAACCAGAGGTGGCAAAAGCTCTCACCTTTGACAAGAGCTCACAAGAAAGGAAACAACTTCTGAACCTTCTACAAGCTAGGGGAAATATTCTGCACAACACAACTGAGATTCAAAGTAGTAAACAAGATTCATACCCATTTGGGACGTTTGCATCAGAGAGTTCATTTGACAGTAGTGTTTATTGCATCTACTGTTTAGGGTTATTTAACAAGAAGTCTTTTGCTTCACATTTAGAGCAGTGTAGGGGAAAATCTACTTACAGTGCTGAGGCTAgctgtgatgaaatgcttcCTAATGCTGGGACCATTCCTCCAACTCCTACACTTATTTTCCCCTCTAGTCCAGAAGAGATTGATGCCAATGTGGAACCATCGGGTTTTCATTGCTTAAACACCCTCTATAAAGCcggttttgaaaatgaacaagGATGTTCTTCCCATCCAGACCTCAGCTGCAATAAACAACCAGACATCTCAAGTCCAAATgagcacagacagacagatggtcGCTTTTTACGATACAGATGTTCTCCTGAAAAAGTAGGTTATGAATTGAAATCAGGTAATTATACCAATCCAAGCACTGGTCAAGAAGACACAGATTGTAATGAGGGAGTAACTCTCCCAAAGTGTGATGTTGACACACCCAAGAGTAGCATGAAAGCCCAAACTTCTGGAAcagggaagaggaggaggaagaggcgCTCACGTGCCCACGATCAGTCACTGATCATGGATGATGACTTGCTGGGTGGAGGAGAGATGCCCAACTCAAAACTGCATGTCTGCCAGCACTGTAAGGCAACTTTTGGCAGTCCATACACGCTGCGCAGACATGAATACACTCACACGGGTGAGAGACCATTTTGGTGTCATCAGTGTAATGTGGGATTCATCCAGAAGTATCGACTATTAAAGCACACATTTGCTTGCCATGGGGACACGCCAGACCAGGAAAAACTGGTGAAAAGGGCAAAAAGATCAATTCAGTATGAAGTGATGTCAGTGAGGGATGAAGAGGTAAAGGAGTATATAGAGCCAGCAACAAAGAGTCTGGAGGATTTACCAAATGCTGTTATAGATGATACCGGGGAGAAAGTTGCAGACGCAAGGCAAGACACAGAGGTAAGAGATTTCCAGTGGGAAGAAGCAGGACACAGTACAGTCAAAGACCATGATGCAGATTGCTAGAAGTTATTGTTTACCTCTTAGTGttgttgggggttttttttgtttgttttttatgtacatatgtTTTACAATGCTGTCTCGATCTGATAGGTTCAATACTTTGTGGATTGATTACTTTGAGGCTGCTCTGTTGTGCAGGTCATGGcatatgtttattaattaacttcattgaaaataaaaaaaaattagaggAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107689064 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234635.1 True 1657 mRNA 0.42 7 20470981 20473411

Neighbor

gene id symbol gene type direction distance location
zgc:66474 LOC107754539,LOC107567164,LOC107660968 coding upstream 1135 20461375 ~ 20469846 (+)
zgc:66443 LOC107567227,LOC107754585,LOC107660992,LOC107552485,LOC107689065,LOC107739396 coding upstream 10630 20457138 ~ 20460351 (+)
LOC122342178 LOC107661000,LOC107567245,LOC798483,LOC107754527,LOC107552447 coding upstream 18991 20444908 ~ 20451990 (+)
LOC122341693 LOC107739398,LOC107754510,LOC107661018,LOC107689062 coding upstream 27525 20430369 ~ 20443456 (+)
dhrs7b dhrs7b,LOC107745957,LOC107755107,LOC107689054,LOC107661099 coding upstream 84147 20382272 ~ 20386834 (+)
si:dkey-93n13.2 LOC107754579,LOC107567217,LOC107661267,LOC107689100,LOC107739413,LOC107552446 coding downstream 774 20474185 ~ 20477233 (+)
LOC122342097 LOC107660919,LOC107567207,LOC107754572,LOC107689067,LOC107552480,LOC107735422,LOC107739406 coding downstream 5275 20478686 ~ 20482737 (+)
sgf29 sgf29 coding downstream 49457 20522868 ~ 20526632 (+)
LOC122341343 spns1,LOC107552478,LOC107754623,LOC107689070,LOC107739389,LOC107660866,LOC107567150 coding downstream 54640 20528051 ~ 20541188 (+)
lat LOC107567139,LOC107755157 coding downstream 67919 20541330 ~ 20548973 (+)
G21671 NA non-coding upstream 62654 20407792 ~ 20408327 (+)
G21669 NA non-coding upstream 77080 20393561 ~ 20393901 (+)
G21660 NA non-coding upstream 125625 20339891 ~ 20345356 (+)
G21661 NA non-coding upstream 128685 20341072 ~ 20342296 (+)
G21655 NA non-coding upstream 156837 20230015 ~ 20314144 (+)
G21687 NA non-coding downstream 6920 20480331 ~ 20518038 (+)
LOC122337901 NA non-coding downstream 247162 20720573 ~ 20726559 (+)
G21732 rnd2,LOC107708553,LOC107552458,LOC107754744,LOC107567027 non-coding downstream 250047 20723458 ~ 20724700 (+)
G21733 NA non-coding downstream 264566 20737977 ~ 20738225 (+)
G21739 NA non-coding downstream 297246 20770657 ~ 20770881 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 275260 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 357483 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 401728 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 1067805 19399408 ~ 19403176 (+)
G21213 NA other upstream 1178640 19291445 ~ 19292341 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 408787 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 822291 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 1164332 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 1501841 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 1503098 21976509 ~ 22025911 (+)

Expression


Co-expression Network