LOC122341283 (hebp1,LOC107670539,LOC107661078)


Basic Information

Item Value
gene id LOC122341283
gene name hebp1,LOC107670539,LOC107661078
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8302071 ~ 8305993 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234657.1
ATGTTTGTCATGATCAAAAACTGGCTGCTTGGAGCCACCGAAGAGAGCGAGTATAAACTGCTGAGCACCGAGTGcaagTCTGGAGGCGCGGAGCTTGATCAGGTGTCAGGTGATCTTCAGCGAAAGCTTCTCGACTACATGAGCGGCGACAACGAACAAGgTGAGGTGATGAACACACCTGTCCCCATCATCTTCACCGTGTTCCCGCGTGACGACGGCTCGTTAAACCGCCGGCTGGTCGCCGCTCTGCGTATCCCAGTCTCCTTCCAGATCAGCCCGCCCAACCCGACCGACTCGTCCATTCGGATCGAGGAGCGGCCCGGCATGACCGTCTACGTGCTGCGCTTCGGGGGTTTCCCGGGAGAGAGCGAGTTTCGCGCGGAAGCCTCACGACTGACGTGTACGCTGGGAGACTCCGCCCCCTTCCTGCGCAAACAGTACCTGTGCTGCATGTACGACCCGCCCATCAAACCCTACGGCCGCCGGAACGAGGTGTGGTTCCTGCAGGACGAGCCCTGAATCCCCCGCTTACCCAGAATCCTCCGCGGCGTGTTGACTTCCAGTAGAGTAGAGGACCGCGAGGAAAACCTCTTCTTTTGTGTGATTCAGACTCAGCTGCTTGATGtcgtgttattttaataaacactggTTTATA

Function

symbol description
hebp1 Predicted to enable heme binding activity. Predicted to be involved in circadian rhythm. Located in extracellular exosome.

NR:

description
PREDICTED: heme-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234657.1 True 655 mRNA 0.57 4 8302071 8305993

Neighbor

gene id symbol gene type direction distance location
LOC122331822 NA coding downstream 44858 8234899 ~ 8257213 (-)
LOC122334091 NA coding downstream 124076 8174036 ~ 8177995 (-)
irgf4 NA coding downstream 181042 8109057 ~ 8121029 (-)
LOC122331782 NA coding downstream 210447 8084369 ~ 8091624 (-)
LOC122331758 NA coding downstream 334200 7966808 ~ 7967871 (-)
LOC122329328 hebp1,LOC107670539,LOC107661078 coding upstream 79071 8385064 ~ 8388690 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 192739 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 207420 8513413 ~ 8524779 (-)
LOC122341497 NA coding upstream 224833 8530826 ~ 8535042 (-)
pde6hb LOC107724721 coding upstream 229118 8535111 ~ 8537581 (-)
G18147 NA non-coding downstream 90772 8158064 ~ 8211299 (-)
G18128 NA non-coding downstream 94738 8206878 ~ 8207333 (-)
G18146 triobp,stap2,triobpb,LOC107574640,LOC107721687,LOC107661081 non-coding downstream 103984 8194376 ~ 8198087 (-)
G18142 NA non-coding downstream 120342 8179263 ~ 8181729 (-)
G18165 NA non-coding downstream 146479 8048971 ~ 8155592 (-)
G18155 NA non-coding upstream 731 8306724 ~ 8389631 (-)
LOC122331391 NA non-coding upstream 8109 8314102 ~ 8317089 (-)
G18183 NA non-coding upstream 95637 8401630 ~ 8404572 (-)
LOC122333427 NA non-coding upstream 115209 8421202 ~ 8421632 (-)
G18193 LOC107573033,LOC107758359,LOC107732521,LOC107569877 non-coding upstream 176654 8482647 ~ 8679157 (-)
LOC122342198 NA other downstream 83016 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 83983 8054039 ~ 8218088 (-)
LOC122339740 NA other downstream 92978 8207698 ~ 8209093 (-)
LOC122334075 NA other downstream 130410 8058631 ~ 8171661 (-)
LOC122331739 NA other downstream 287370 8010976 ~ 8014701 (-)
fmc1 NA other upstream 3539 8309532 ~ 8398828 (-)
zgc:113210 NA other upstream 686721 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 828050 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 1120579 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1687840 9993833 ~ 10210616 (-)

Expression


Co-expression Network