LOC122341286


Basic Information

Item Value
gene id LOC122341286
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8493421 ~ 8494226 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234658.1
AGCATGTCTCTGCTCTCGTCCCTGCGCTCTCCTCGGCTGTCCTTCATCCAGACTCTGCTGTCTCTGCTGCTGTCTCTGGTGTCCCTGTCCTCCTCGTACTGGTGCGTGGGCCGGCAGAAGGTTCCCAAGCCTCTGTGCTCCGCGGCTCGCCGGCTCAAGTGCACTCCGGTGCACGGCGTCTCGGATGGGTCCTTCTCCTGGGAGACCGGAGACGATCGCTTCATCTTCCCCTCCTTCCACGCCGGACTCTGGACCACCTGCGAGAGAACATCTTCACGGACGCCTGGGGTGAGGGGTCAGGATGAGACGAGGAcagatgtgtttgtgagagattga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234658.1 True 336 mRNA 0.62 2 8493421 8494226

Neighbor

gene id symbol gene type direction distance location
wbp2nl wbp2nl,LOC107569878,LOC107661077,LOC107670540,LOC107749952,LOC107568364 coding upstream 192661 8296132 ~ 8300760 (+)
rrp7a LOC107673310,LOC107591059 coding upstream 263807 8227784 ~ 8229614 (+)
poldip3 poldip3,LOC107661083,LOC107580331,LOC107714893,LOC107666602,LOC107579899 coding upstream 266067 8219924 ~ 8227354 (+)
ndufa6 ndufa6 coding upstream 286340 8201599 ~ 8207081 (+)
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding upstream 292943 8189453 ~ 8200478 (+)
LOC122341872 bglap,LOC107746533,LOC107676398 coding downstream 57860 8552086 ~ 8556310 (+)
ddx47 ddx47,LOC106601200 coding downstream 71174 8565400 ~ 8575713 (+)
LOC122341890 grin2bb,LOC107725336,LOC107573036,LOC107698059,LOC108425688,LOC107758357,LOC107661082,LOC107676879 coding downstream 122054 8616280 ~ 8660516 (+)
LOC122330982 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding downstream 210218 8704444 ~ 8708282 (+)
LOC122342001 cpt1cb,LOC107747872,LOC107667163,LOC100333227,LOC107730771,LOC107689673 coding downstream 340903 8835129 ~ 8854765 (+)
G18055 NA non-coding upstream 3004 8474293 ~ 8490417 (+)
LOC122331402 NA non-coding upstream 178931 8312389 ~ 8314490 (+)
G18010 NA non-coding upstream 276204 8215252 ~ 8217217 (+)
G18025 fam234b,LOC107576065 non-coding upstream 276390 8216524 ~ 8217031 (+)
G17990 NA non-coding upstream 348396 7984480 ~ 8145025 (+)
G18092 NA non-coding downstream 177435 8671661 ~ 8675886 (+)
G18261 hs3st2,LOC107550309,LOC107703334,LOC107741797,LOC107574133,LOC107674621 non-coding downstream 386972 8881198 ~ 8882122 (+)
G18303 NA non-coding downstream 755873 9250099 ~ 9250630 (+)
G18305 NA non-coding downstream 767744 9261970 ~ 9262239 (+)
G18425 LOC105357980 non-coding downstream 919418 9413644 ~ 9414007 (+)
LOC122341282 LOC107690132,LOC107722730,LOC107572760 other upstream 340527 8150743 ~ 8152894 (+)
G18008 LOC107572757,LOC107745393,LOC107676178,LOC107574638,LOC107690127 other upstream 433564 8056659 ~ 8059857 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other upstream 527227 7964749 ~ 7966194 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other upstream 530445 7960071 ~ 7962976 (+)
G17985 ighv4-5 other upstream 542057 7950854 ~ 7951364 (+)
G18048 NA other downstream 19123 8513349 ~ 8742302 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other downstream 50065 8544291 ~ 8551151 (+)
LOC122341292 LOC107729471,LOC107687638 other downstream 486365 8980591 ~ 8988810 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other downstream 515824 9010050 ~ 9012178 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other downstream 644241 9138467 ~ 9183290 (+)

Expression


Co-expression Network