si:dkey-16l2.17 (si:dkey-16l2.17,LOC107582999,LOC107729501,LOC107658439,LOC107737763,LOC107689709,LOC107554090)


Basic Information

Item Value
gene id si:dkey-16l2.17
gene name si:dkey-16l2.17,LOC107582999,LOC107729501,LOC107658439,LOC107737763,LOC107689709,LOC107554090
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12179223 ~ 12182498 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234668.1
atgcaaatagaaGTGAAGAACACTGTGTGCGGCAGGCCTTTGCTAGGGAAACGCATCGTGGGAGGAGCTGAAGCATCAGCAGGGGCATGGCCGTGGCAAGTGGACATTCAGTTAGGATCCAAAGGCCATGTTTGTGGTGGATccataattgaaaaaaattggGTCCTCTCTGCTGCACACTGCTTTCCAAACCCCTCAGAAGTGTCTTCGTATCGCCTGTACATGGGACGCCATCTGCTCAATGGCTACAACCAGTTTGAGATGGTCAGTCAGGTGCAGCAAGTGGTCGTTCCAGAAGGATACTCGACTCCTCAGGAGGGCAGAGATGTAGCTTTAGTTCAGCTGCGCTCTCCTGTCACCTGGTCAGACAGGATCCAGCCTGTATGTCTGCCATATGCTGGATTCCAGTTCAACAGTGGCATCTTATGCTACGTCACGGGCTGGGGACACATTCAGGAGGGAGtttCCCTCACTGGAGTCGGGGCATTACGGGAAGTGCAGGTGCCCATTATCAACCAGTCCTCCTGCCAGTCGATGTATCAGATTTTGTCATCCGATTTAGTAACAGTCAACATCCTATCAGACATGATCTGTGCTGGATACATGGAGGGAGGCAAGGATTCCTGTCAGGGGGACTCTGGAGGCCCTCTGGTTTGTCCTGGTGGCAACGGGACTTGGATTCAAGCGGGAGTTGTAAGTTTTGGACTTGGATGTGCTCAGAAGAACCGGCCAGGTATCTATTCCAGAGTCTCAAGCTTCGCGAGCCTCATCCGCACCACAGTACCAGAAGCTCAATTTTTCGGTCATGCTCAGAAGAATGAAATTCAAATCCTTCTGGTTCTAGGCCTCTCTTTTGCATTAGTACTTTTGTGGAGGTAGTATATTAGTAAAGTATATGCGGTATACATGTGAAACACAAGGTCAAGATTCCAAACATCatagttttgtttgtgtggCATTGATTTGCCATATTTTAggtattgcaattttttttaatgatgtaatACAGTATGTGACGTTGATGATTGAGAGTTCTGGTCATCTGATCCTTCCTAAGCACGGATctagttattttatatactgttGTTACTGTGAATTAGATTTCTTTTGTACAGTTTCAGTAATGTCGCCAAGACCTCAGAACATTCTAAATGCCAATATCCTTTTCAAcaggataaataaaatattttgtatttcttgtATTGATTATTTGTAATGAGATATCTAATTGATTTGACTGCATAAGGCATAATATTGCACATTACAGCTTTGTGTGTTCTATGGCTTTCAGTAATCAGTACCAGTATTGTAActtctttaataattttaggatgtatattaaattagaatGTCACCTGTGTTTTCCCTTTTActgggtttttatttatttaagttttcaATTTAAGGATGCACAgcgctttttttaaatacatcataTACTTTTTGGGACTGGCATACTTAAAGATTTAACCTTGGTTATGGTATTAAAAAGGCTTGCCTAtggtaattaaattaaattaaattaaattaaaagctagataattatatttttaagtcacATGGCATTTGAATGTTTctccaaaacactttttcccactTTCACACTCACATGGAGGACATCTGTTGAAGTGCTCCAGAAACTGCTCTTTTGACCTAATTTCTGAACA

Function

symbol description
si:dkey-16l2.17 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Orthologous to several human genes including PRSS27 (serine protease 27).

NR:

description
PREDICTED: serine protease 33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234668.1 True 1667 mRNA 0.41 5 12179223 12182498

Neighbor

gene id symbol gene type direction distance location
kat8 kat8,LOC107582998,LOC107658503,LOC107729500,LOC107689650,LOC107554120 coding upstream 1494 12174276 ~ 12177729 (+)
rnf25 rnf25,LOC107729499,LOC107658504,LOC107582997,LOC107689710,LOC107554089 coding upstream 5349 12168881 ~ 12173874 (+)
si:dkey-16l2.16 si:dkey-16l2.16,LOC107729502,LOC107554119,LOC107658507,LOC107730777,LOC108427354,LOC108280555 coding upstream 10492 12163610 ~ 12168731 (+)
thoc6 thoc6,LOC107729483,LOC107583000,LOC107689651,LOC107730738 coding upstream 16582 12159182 ~ 12162641 (+)
srrm2 LOC107729482,LOC107583001,LOC107554117,LOC107689653,LOC107730748 coding upstream 20622 12149797 ~ 12158601 (+)
fus fus,LOC107658502,LOC107554122,LOC103040960 coding downstream 753 12183251 ~ 12192143 (+)
setd1a LOC107729457,LOC107658500,LOC107737760,LOC107582993,LOC107554121 coding downstream 11480 12193978 ~ 12215690 (+)
hsd3b7 hsd3b7,LOC107582995,LOC107658501,LOC107729456,LOC107737759,LOC107554123,LOC107689649 coding downstream 34113 12216611 ~ 12230379 (+)
cd2bp2 cd2bp2,LOC107582988,LOC107729467,LOC107554127,LOC107737770,LOC107683307 coding downstream 71360 12253858 ~ 12259180 (+)
prr14 LOC107729463,LOC107658509,LOC107582987 coding downstream 76978 12259476 ~ 12268093 (+)
G19274 NA non-coding upstream 44266 12132629 ~ 12134957 (+)
G19263 NA non-coding upstream 60448 12118538 ~ 12118775 (+)
G19257 NA non-coding upstream 104720 12074231 ~ 12074503 (+)
G19255 NA non-coding upstream 106150 12072719 ~ 12073073 (+)
G19208 NA non-coding upstream 205217 11967648 ~ 11974006 (+)
G19287 NA non-coding downstream 45437 12227935 ~ 12228520 (+)
G19579 NA non-coding downstream 498760 12681258 ~ 12681565 (+)
G19575 LOC107690704 non-coding downstream 500320 12682818 ~ 12686371 (+)
G19656 NA non-coding downstream 814719 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 823312 13005810 ~ 13096854 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 61284 12114048 ~ 12117939 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other upstream 78371 12092603 ~ 12100852 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other upstream 129801 12027149 ~ 12049422 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other upstream 285567 11885655 ~ 11893656 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 345299 11773200 ~ 11833924 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 49929 12232427 ~ 12249997 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other downstream 120866 12303364 ~ 12315046 (+)
G19326 NA other downstream 329428 12511926 ~ 12513721 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other downstream 337339 12519837 ~ 12528803 (+)
LOC122332158 LOC107583070,LOC107737766 other downstream 652883 12835381 ~ 12987913 (+)

Expression


Co-expression Network