LOC122341310 (LOC107674591)


Basic Information

Item Value
gene id LOC122341310
gene name LOC107674591
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15146294 ~ 15148145 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234674.1
GCTTTCGCAGAGAAGTGGGTCCAGGACAGAGACAGATTCTATGTTTTCTCCAGCGATAAAAAGGACTGGAACAGCAGCAGACGACGCTGTCAGGATCTGGGTGGAGATCTGGTCATCATCAACAACAAAGAGGAGCAGAACTATCTTGCAAAGAAGATACACGCTATTGGCAGAGACGCGTTATATTGGATTGGTCTGACTGATAGCCGCACAGAAGGTGTATGGCTGTGGGTGGACAACACCAAGGATCATCTTGAGTTTTGGGCGCTGCCTCCTGATGATCACAAATCAGCTGACAATCCTCTGGGGGAGGACTGTGTTGTACTGAATGGACGAACGTTTGAGGCCAAGTGGGGAGATGTTTTTTGCTTGAGGCAGGAGAGAAGCATTTGTGAGATTCCCTGTTCTGACTAAATGATATTTCCATATGTAGTTTACGCATCCTTTTACACgcatgtaataaaatgtgcatagGCCCTGGGGAAAATGTACAATAAAGATCAAATTAAAGTGGCATATGATCATAATAAatgtaagagaaaaaaaatctgattggtCACTTAATGTAAACAGTTATAAAGAGGAGCTTGTTTAGGactattttgacatttttatacattttcataaaagatCAAAGGAAAAACTCTAAACTCAGCCGAAGACTAAGAGTAGTCTTCAGCTACCACAAATTCTGTggtttttcagcattttctgtgtttgagttagattttttttttgtttttgaacccTTTCCGACagtgactgtatgattttgagatccatcttttcacactgatgACAGCTGAGGGACTCGTATGCAACTATTAGAGAAGGTTGAAAAgctcactgatgctccagaaaGAAAGCACAATGCATGAAAAATTCTAAACAGaatgaagatttttttcttattttgcctaAATATCATATCTTCTCATTCAGTACTGCCCTTCAGGAGCTACAGAAGATATGTGCATGTTTCCCAGAAGACCAAATAAGTTAATTTTACCATGGTCttcaaatttaacattttttccaaCCCCTGGCTCTTAACACGTTGTgtttccttctggagcatcagaGAGCTTTTGAAACTTCTGTAATAGTTGCATATGAGTCCCTCAGTTGTCctcaaaaatgatgaaaaaacacGGAATTTTGTAGCTGAGGaacatttttctgaagaacagccgGCTGGTTAACTGTTCAAGAgacaaacaaagagaaacatGAACAGCTATCActaaaaacacagctgtggaTCATTCAGCTAACAACACAGTAATAAAAAACTAGAGTCATATTTATACATTCGTctattattttctcttattgactgtaaatgttttttatgtgaaatgtcttattcaggtcagtactatataaaaa

Function

NR:

description
PREDICTED: hepatic lectin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234674.1 True 1389 mRNA 0.38 3 15146294 15148145

Neighbor

gene id symbol gene type direction distance location
LOC122341946 LOC107720104,LOC107592690,LOC107674628 coding downstream 5273 15138220 ~ 15141021 (-)
LOC122341944 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding downstream 8400 15131415 ~ 15137894 (-)
retsat.2 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding downstream 15707 15126501 ~ 15130587 (-)
cdk21 cdk21,LOC107581773,LOC107591488,LOC107674697,LOC107720098,LOC107738149,LOC107654471 coding downstream 19926 15122546 ~ 15126368 (-)
svilc LOC107581739,LOC107654532,LOC107591458,LOC107674723 coding downstream 24518 15097919 ~ 15121776 (-)
nmt1a nmt1,nmt1a,LOC107737859,LOC102778525 coding upstream 1746 15149891 ~ 15158341 (-)
arhgap23a LOC107581737,LOC107654534,LOC107591523 coding upstream 32457 15180602 ~ 15243122 (-)
fam83ga LOC107738115,LOC107654540,LOC107581794 coding upstream 154103 15302248 ~ 15309607 (-)
grapa grapa,LOC107654542,LOC107720042,LOC107581733,LOC107737776,LOC107592716,LOC107674739,LOC108430571 coding upstream 161600 15309745 ~ 15316561 (-)
b9d1 b9d1,LOC107737762,LOC107674617,LOC107654544 coding upstream 190817 15338962 ~ 15341877 (-)
G20253 NA non-coding downstream 156303 14988277 ~ 14989991 (-)
G20248 NA non-coding downstream 187007 14956739 ~ 14959287 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding downstream 294432 14849717 ~ 14851862 (-)
G20233 asic2,LOC107720021,LOC107654528,LOC107601227,LOC107674665,LOC107720082,LOC107590422 non-coding downstream 458858 14632214 ~ 14687436 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding upstream 103950 15252095 ~ 15254617 (-)
G20338 aldoaa,LOC107581735,LOC107720037,LOC107674678,LOC102778271,LOC103381979 non-coding upstream 132202 15280347 ~ 15333486 (-)
G20352 epn2,LOC107674690,LOC107720043,LOC107654543 non-coding upstream 171565 15319710 ~ 15324611 (-)
G20363 NA non-coding upstream 217991 15366136 ~ 15366451 (-)
G20546 NA non-coding upstream 486927 15635072 ~ 15637612 (-)
LOC122341947 NA other downstream 686 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 706753 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 941944 14202930 ~ 14204350 (-)
G19933 NA other downstream 1340316 13805368 ~ 13805978 (-)
gng13b NA other downstream 1353692 13786009 ~ 13792602 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 450625 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1302995 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1304929 16453074 ~ 16455479 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 1567576 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 1714580 16862725 ~ 16873987 (-)

Expression


Co-expression Network