LOC122341347


Basic Information

Item Value
gene id LOC122341347
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 21354367 ~ 21363114 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234697.1
GAACGTGAGCGCGTGTATATGAAGTGGCTACAGGTGTTGATGGTTAGTTATCGGGTGACTGGGATCCTGACCATGTGACCGGCTCGTCTCGACAGCTGTCCCGCTCTGTCCGTCCAATTGACTTTCGCTTTCGCGTGAGAAACGCAACCTTTCAAATGGCGTCCCAAGAAGAAACGAAGATATCAACGAAAAGAAGCAGCATGAGTCCTCCTCCAAACTtgtctGAATTAAGGATTTGGTTGTTGGGAGAAGACTGTGCTGATAAGAGTTCAGTGGGAAACTTGCTCTTGGGAAGAAATGAATTTGGAAGAGAAGCTTCAGCTGAATCAGGCAGAGGACAGATTAAGGATCAAAGCATATCTGTGGTCATCACACCAAATCTGTTTAAAAGAGACGTTCCTTCAGATGCAATTACTCATGAACTAAAAAACTGTGAGGCCAAGTCTGCTCCAGGTCCACACGTACTTCTGCTAATTCTGCAACCAGAAATGTCCAAAGAGAAGGTGAACTATATGAGTAACACCATGAACTCCTGGTCAAAGCACACAATGAATCATACTCTGGTAGTGGTGATGGAGGGAGAGAAGAAAATCAGTACTTCTAAAGAGGAAAAacttcaacatttatttaaagaaaaatgccaCAAATTAAACGCATTATTGACAGATCAACACAGTTTAGTCACTGAACTATTTGACAAAATCATGAACTCGGTGAAGAAGAATGAATGGAATTATCTCATCTTTGAAATATATGAATCACCACCAGAGAtgccacaaaagaaaaaagccaTGGAGAAATTTGCAGGATTTTCATCAgactttaaacacaaaattgcATCAATTGTGCAAACATCGTCTCAGAGCacaagaaacaaagaaaGGCCTGTTCTCAATTTGGTGATGTTTGGAAGTAACAGAGCTCAGAAGACTTTAGCTGTGAACACAATACTGGGCCTCAGAGAGTCTGCAGAATTGTCTGAATCTGAAAGCCATCATAAATGTGTCAGGAGAGACGGTGTGATATGTGGACACAAGGTCACCCTGGTTGAGATGCCGAAGCTAAACAAAACATCTATTTCTCAGAAGGAAATGCTGCAAGAGTCTTACAATGCTCTGTCTTTATGTTCATTTAACATAAACGCATTTCTCCTGGTCCTCACTGTTGATTCTCTCACTGACGATGATAAAGGAGAATTTAAATTAATGAGTGAAATTTTCAACACAGCTGATGAGAAGTTCTGGAATTGTCTGATGATAATTTTCCTATATGAAGGGAACAGAGAGGACATGATTGCCAATGAATTCatacaagaaaacaaagacattcagACATTACTGAAGAAATGTGGGAACAAACATTACATACTCAGTGTTAAACAAAGACCTGATAGTGCACAGCTTTTAGAAATGCTTCATATGATTTATACAGTTACTTGTTACTCATTGGAAACATATCAGCAGGCTCAAATGGATGATAGACTTCAACTAAAggccaaaaataaacaattagaGGAAGAAATCAGAACGttgaaaatgattaatgaaAAGAAAGGTAACTCAGATGACAGAAAGTGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234697.1 True 1577 mRNA 0.39 6 21354367 21363114

Neighbor

gene id symbol gene type direction distance location
LOC122337639 syngr1a,LOC107725053,LOC107684634,LOC107727456,LOC107590782,LOC107582870,LOC107694963 coding upstream 11119 21330328 ~ 21343248 (+)
LOC122341346 LOC107582910,LOC107684633,LOC107725046,LOC107694962,LOC107590781,LOC107727455 coding upstream 24811 21316273 ~ 21329556 (+)
zwi zwi coding upstream 107559 21244992 ~ 21246808 (+)
LOC122337590 nxph3,LOC107710880,LOC107568907,LOC107660556,LOC107754835,LOC107590800 coding upstream 296118 21030624 ~ 21058249 (+)
tmub2 LOC107571926,LOC107708558,LOC107754824,LOC107566939,LOC107660620,LOC107689088 coding upstream 565363 20784533 ~ 20789004 (+)
LOC122337169 LOC107731852,LOC107571197 coding downstream 325 21363439 ~ 21366154 (+)
LOC122337825 LOC107590788,LOC107684637,LOC107710882,LOC107678872 coding downstream 26033 21389147 ~ 21403118 (+)
LOC122341349 LOC107725047,LOC107590786,LOC107678868,LOC107710878,LOC107684649,LOC107582907,LOC107725048,LOC107684648 coding downstream 66568 21429682 ~ 21437955 (+)
LOC122340007 LOC107710878,LOC107678868,LOC107725047,LOC107590786,LOC107582907,LOC107684649 coding downstream 78808 21441922 ~ 21444741 (+)
LOC122341350 LOC107738996 coding downstream 84057 21447171 ~ 21450709 (+)
G22046 zwi non-coding upstream 11098 21247604 ~ 21343269 (+)
LOC122337857 NA non-coding upstream 62432 21290349 ~ 21291935 (+)
LOC122337912 fam57b,LOC107684641,LOC107678875,LOC107754912,LOC107710888 non-coding upstream 84875 21253746 ~ 21269492 (+)
LOC122337868 NA non-coding upstream 102937 21248110 ~ 21251430 (+)
G22044 NA non-coding upstream 140751 21141065 ~ 21213616 (+)
G22084 LOC107684649,LOC107590786,LOC107725047,LOC107582907,LOC107678868,LOC107710878 non-coding downstream 18694 21381808 ~ 21383124 (+)
G22197 NA non-coding downstream 272630 21635744 ~ 21636079 (+)
G22198 NA non-coding downstream 273009 21636123 ~ 21636570 (+)
G22201 NA non-coding downstream 371024 21734138 ~ 21734422 (+)
LOC122341843 NA non-coding downstream 672768 22035882 ~ 22089931 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other upstream 397793 20882198 ~ 20956574 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 1158646 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 1240869 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 1285114 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 1951191 19399408 ~ 19403176 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 274629 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 612138 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 613395 21976509 ~ 22025911 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other downstream 905872 22268986 ~ 22336227 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other downstream 1165875 22528989 ~ 22530060 (+)

Expression


Co-expression Network