gh1 (LOC107585059,LOC107740644,LOC107662423)


Basic Information

Item Value
gene id gh1
gene name LOC107585059,LOC107740644,LOC107662423
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 21924489 ~ 21926112 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234701.1
ATGAAAAATGAATCTCCTTCTTGTCTTCCGCTAGCATTAGTGCTGTTGTCGGTGGTGCTGGTTAGTGTGTTGGTGAACCAGGGGAGAGCTTCGGAAAACCAGCGGCTCTTCAATAACGCAGTCATTCGTGTACAACACCTGCACCAGCTGGCCGCAAAAATGATCAATGACTTTGAGGACAGCCTGTCGCCTGAGGAGCGCAGACAGCTCAGTAAAATCTTCCCTCTGTCTTTCTGCAATTCTGACTACATTGAGGCGCCAACTGGAAAAGATGAAACACAGAAGAGCTCTatGTTGAAGCTCCTCCGCATCTCTTTCCGTCTCATTGAGTCCTGGGAGTTCCCCAGCCAGACCCTGAGTGCAACCGTCTCAAACAGCCTAACCGTCGGGAACCCCAACCAAATCACCGAGAAGCTGTCCGACTTGAAAATGGGCATCAGTGTGCTCATCAAGGGATGTCTCGATGGTCAACCAAACATGGAAGATAACGACTCCCTGTCGCTGCCTTTTGAAGACTTCTACTTGACCATGGGGGAGAACAACCTCAGAGAGAGCTTTCGTCTGCTGGCTTGCTTTAAGAAGGACATGCACAAGGTGGAAACCTACCTGAGGGTGGCAAACTGCAGGAGATCCCTGGATTCTAACTGTACCCTGTAGAGGGCGCCGGTGTATTGCAAGTCAATGCCTCCAAATCTAAGACCAGTTTAAGTCCTTAAAACTTCCTTAAGTAATGAGTCGGTCTTATATGTGCAGGAATTGTCAACCAAGCACGGCTAGGCCTGTC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0046872 metal ion binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05438 GH; growth hormone

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234701.1 True 784 mRNA 0.49 4 21924489 21926112

Neighbor

gene id symbol gene type direction distance location
scn4ab scn4ab,LOC107754300,LOC107683681,LOC107582874 coding upstream 5784 21899306 ~ 21918705 (+)
kansl1b LOC107740647,LOC107662409,LOC107754301,LOC107694965 coding upstream 81617 21797020 ~ 21842872 (+)
cdc27 cdc27,LOC107740649,LOC107754304 coding upstream 129086 21783456 ~ 21795403 (+)
LOC122341350 LOC107738996 coding upstream 473780 21447171 ~ 21450709 (+)
LOC122340007 LOC107710878,LOC107678868,LOC107725047,LOC107590786,LOC107582907,LOC107684649 coding upstream 479748 21441922 ~ 21444741 (+)
rdm1 zgc:103564,LOC107585100,LOC107662434,LOC107740678 coding downstream 754 21926866 ~ 21929640 (+)
ifnphi3 LOC107579891,LOC107579948 coding downstream 7132 21933244 ~ 21934233 (+)
arhgap27l LOC107585057,LOC107740641,LOC107754298,LOC107683679,LOC107582875 coding downstream 25195 21951307 ~ 21974701 (+)
LOC122331845 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 coding downstream 49123 21975235 ~ 21976366 (+)
tanc2a tanc2a,tanc2,LOC107662401,LOC107711284,LOC107585082,LOC107667760 coding downstream 198778 22124890 ~ 22256992 (+)
G22201 NA non-coding upstream 190067 21734138 ~ 21734422 (+)
G22198 NA non-coding upstream 287919 21636123 ~ 21636570 (+)
G22197 NA non-coding upstream 288410 21635744 ~ 21636079 (+)
G22094 tcap,LOC107684635,LOC107590785,LOC107582871,LOC107727457,LOC107694957 non-coding upstream 430991 21345129 ~ 21493498 (+)
LOC122341843 NA non-coding downstream 109770 22035882 ~ 22089931 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding downstream 585316 22511428 ~ 22672911 (+)
G22554 ddx5,LOC107695114 non-coding downstream 1014135 22940247 ~ 23028505 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding downstream 1163361 23089473 ~ 23095422 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding downstream 1174832 23100944 ~ 23148618 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other upstream 190362 21637743 ~ 21734127 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other upstream 510203 21295702 ~ 21414286 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other upstream 967915 20882198 ~ 20956574 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 1728768 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 1810991 20094851 ~ 20113498 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 49140 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 50397 21976509 ~ 22025911 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other downstream 342874 22268986 ~ 22336227 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other downstream 602877 22528989 ~ 22530060 (+)
G22329 LOC107585049,LOC107740630,LOC107662396,LOC107582928,LOC107717208 other downstream 620046 22546158 ~ 22547208 (+)

Expression


Co-expression Network