G17581


Basic Information

Item Value
gene id G17581
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9473611 ~ 9473929 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19709
TTGTATTAAAGCATGTTAAAAACACCAAATAGGCATATGAACAACATTAAAAACTTGATTTTCACCACAGGGGGACTTTAAAAGAAACATTCTAAGAACATTTTAATAATCTAAAGAACCCCTTTCACAATAAAGACCCTTTTGAGCAATGGAAAGGTTTCATGGATGTTGAAAGTTCTTCATGGAACTATAAATGCCAGTAAAGAACCTTTATTGTTAACAATGTCAAATTCAGCGGAAGTCTGTTGAGCTTAGATTGTTCCAACTGCTTTTTTTTTTTTTTCATTCACTGAAAGTCAGTGGGGTCCCAAACAACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19709 True 319 lncRNA 0.38 1 9473611 9473929

Neighbor

gene id symbol gene type direction distance location
CI01000001_09435836_09436037 NA coding upstream 37238 9435836 ~ 9436373 (+)
CI01000001_09409294_09411908 TTPAL coding upstream 61180 9408019 ~ 9412431 (+)
CI01000001_09400828_09406357 HNF4A coding upstream 66388 9399031 ~ 9407223 (+)
CI01000001_09383903_09384322 NA coding upstream 88933 9383899 ~ 9384678 (+)
CI01000001_09334528_09350703 RBMS2B coding upstream 122248 9334528 ~ 9351363 (+)
CI01000001_09477768_09481888 WISP2 coding downstream 3760 9477689 ~ 9481974 (+)
CI01000001_09483845_09484834 NA coding downstream 9916 9483845 ~ 9485747 (+)
CI01000001_09491225_09507444 PFKFB1 coding downstream 16298 9490227 ~ 9508011 (+)
CI01000001_09509892_09522047 NA coding downstream 35963 9509892 ~ 9523081 (+)
CI01000001_09533674_09538902 NA coding downstream 59745 9533674 ~ 9539079 (+)
G17566 NA non-coding upstream 91951 9381135 ~ 9381660 (+)
CI01000001_09308544_09311741 NA non-coding upstream 162017 9306701 ~ 9312011 (+)
G17326 NA non-coding upstream 199652 9213456 ~ 9273959 (+)
CI01000001_09132867_09145278 PA2G4.L, PA2G4-B, PA2G4B, PA2G4, PA2G4A non-coding upstream 328056 9132867 ~ 9145555 (+)
G17583 NA non-coding downstream 651 9474580 ~ 9474783 (+)
G17587 NA non-coding downstream 83664 9557593 ~ 9557897 (+)
G17588 NA non-coding downstream 84222 9558151 ~ 9558420 (+)
G17594 NA non-coding downstream 93974 9567903 ~ 9568225 (+)
G17601 NA non-coding downstream 101702 9575631 ~ 9575901 (+)
G17354 NA other upstream 232934 9234463 ~ 9240677 (+)
G17353 NA other upstream 244752 9216022 ~ 9228859 (+)
G17234 NA other upstream 1441128 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1933025 7531541 ~ 7540586 (+)
G18896 NA other downstream 765971 10239900 ~ 10241492 (+)
G18873 NA other downstream 783183 10223879 ~ 10260714 (+)
G18872 NA other downstream 797217 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 919628 10394851 ~ 10396705 (+)
G18937 NA other downstream 1001055 10474984 ~ 10476389 (+)

Expression


Co-expression Network