LOC122341365


Basic Information

Item Value
gene id LOC122341365
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24369213 ~ 24374564 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234709.1
ATGGATAAACGCGACAAGAAAGCGAAAAAGGATTCGGGGAAGTCTGCGAAACGCACGGGCAAGCTGTTCCGGAGGAAATCGTTCAAATCCGTGGAAAGTTTGGAAAGAGGACGGCGGCCAGGTGAGGAAAAGTTGCTCTCTTCCTGCCGTTCCTCCGCGAAAGAGCGACTGTTCACGCTGTACGGGGATAAAACGCCCGGAGTGCTGGGTCTGAAGAACCACGGGAACACCTGCTTCATGAACGCCGTCGTGCAGTGCTTGAGCAACACGGACCTGCTCGCCGAGTATCTGTGTCTGGAGCGATATAAACTGGATCTGTGTCGCAGGGGAGTGAACGGGTTTATAAAGAATGAGAACGGTCAGCAGGAGAAGGGAGAGGTCACGGAACGCCTCGCGACTTTGGTCCGAGCGCTTTGGACTTTGCAATACACCCCTCAACTCTCGGCTGAGTTTAAGATGACGGTATCTAAATACGGTGCTCAGTTCCGTGGGAATTCCCAGCATGACGCGCTCTTGAATTCCTGCTCTGGCTTCTGGACCGCCTCCATGAGGACGTCAACTCATCTTCAGCCCTCCCAATGGGAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234709.1 True 588 mRNA 0.54 3 24369213 24374564

Neighbor

gene id symbol gene type direction distance location
LOC122342039 foxred2,LOC107719334,LOC107559237,LOC107670923,LOC107703880 coding upstream 206971 24156356 ~ 24162242 (+)
LOC122342038 mcm5,LOC107703892,LOC107670920 coding upstream 220854 24142816 ~ 24148359 (+)
LOC122342047 gcat,LOC107703894,LOC107670921 coding upstream 227092 24138543 ~ 24142121 (+)
tom1 LOC107672685,LOC107583252,LOC107719328,LOC107563358,LOC107703898 coding upstream 274603 24083986 ~ 24094610 (+)
zgc:171844 zgc:171844,LOC107672688,LOC107719339,LOC107583313,LOC107703875 coding upstream 297369 24058693 ~ 24071844 (+)
gcat gcat,LOC107703894,LOC107670921 coding downstream 146464 24521028 ~ 24524600 (+)
foxred2 foxred2,LOC107719334,LOC107559237,LOC107670923,LOC107703880 coding downstream 164759 24539323 ~ 24545214 (+)
ankrd54 ankrd54,LOC107670919,LOC107559232,LOC107563363,LOC107719341,LOC107728844,LOC107703879 coding downstream 170847 24545411 ~ 24549093 (+)
hmgxb4a LOC107658693,LOC107758107,LOC107728447,LOC107703878,LOC107563362 coding downstream 174663 24549227 ~ 24557112 (+)
si:dkeyp-69e1.8 LOC107758106,LOC107658694,LOC107703890,LOC107728849,LOC107563364,LOC107559220 coding downstream 184182 24558746 ~ 24562589 (+)
G22990 NA non-coding upstream 29559 24338871 ~ 24339654 (+)
G22982 NA non-coding upstream 133138 24233766 ~ 24236075 (+)
LOC122342065 NA non-coding upstream 154239 24212347 ~ 24214974 (+)
G22959 NA non-coding upstream 155932 24100860 ~ 24213281 (+)
LOC122342061 NA non-coding upstream 158751 24209574 ~ 24210462 (+)
G23002 NA non-coding downstream 183147 24557711 ~ 24558261 (+)
G23005 NA non-coding downstream 188248 24562812 ~ 24563127 (+)
G23004 NA non-coding downstream 188682 24563246 ~ 24563895 (+)
G23011 NA non-coding downstream 237962 24612526 ~ 24612751 (+)
G23014 ldlra,ldlr,LOC107758126,LOC107658701 non-coding downstream 240603 24615167 ~ 24673712 (+)
G22958 NA other upstream 272054 24095024 ~ 24097159 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other upstream 317300 24039902 ~ 24051913 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other upstream 647494 23709503 ~ 23721719 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other upstream 937447 23424621 ~ 23431766 (+)
LOC122341907 NA other upstream 960399 23403441 ~ 23408814 (+)
G22996 LOC107703883,LOC107563351,LOC107719336,LOC107583295 other downstream 59491 24434055 ~ 24439463 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other downstream 72314 24446878 ~ 24449289 (+)
mcm5 mcm5,LOC107703892,LOC107670920,LOC107719335 other downstream 150716 24525280 ~ 24530769 (+)
G23026 LOC107559242,LOC107758098,LOC107658707,LOC107728516,LOC107695967,LOC107568243 other downstream 346962 24721526 ~ 24811577 (+)
LOC122342019 LOC107758123 other downstream 608717 24983281 ~ 24993218 (+)

Expression


Co-expression Network