LOC122341412


Basic Information

Item Value
gene id LOC122341412
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29916253 ~ 29921491 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234738.1
atgaagggAAGAAGTGAAAACTTCAATAGCAATGAAAGCAATCGCAATGAAGATTCTAGAGAAAACAAAGAGCTTTTTTCTGAATACACCACACCACGAAAACTAGTGGTGAAATCCTGGAGGATTGGAGTGATGTATCGCTTATATCAGTTAATAGCGATACCTTATGCTCTCTTATACGTGGCTTGGAGTGGAGGCCACCAGGAGACTGATACCATCCTCAGCTCTGTGACAACCAAAGTAAAGGCATCGCTTATAACAAACACTACCGAGCTTGGTGAACAGGTCTGGGATGTGGCTGACTACATCATTCCAGCTCAGGAGGATGGGTCATTCTTTTTGATGACCAACATGGTCATCACACCAAACCAAACACAGTCAACATGTCCAGAGtaTCCAACCCCAAAAACCATTTGCACATCTGACATGAACTGCACCAAAGGCTTTAAAGATCATCAAGGAACAGTAAGGCTCAATCTgtacactaaataaaaataatcatttttg

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0006812 cation transport biological_process
GO:0070207 protein homotrimerization biological_process
GO:0034702 ion channel complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0004931 extracellularly ATP-gated cation channel activity molecular_function
GO:0001614 purinergic nucleotide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234738.1 True 507 mRNA 0.42 5 29916253 29921491

Neighbor

gene id symbol gene type direction distance location
LOC122334671 LOC107563545 coding upstream 131149 29773885 ~ 29785104 (+)
LOC122334720 LOC107570416,LOC107685875,LOC107749047,LOC107728228 coding upstream 191146 29691307 ~ 29725107 (+)
LOC122335371 LOC107758342 coding upstream 591333 29321348 ~ 29324920 (+)
pycr1a pycr1a,pycr1,LOC107732146,LOC107675279,LOC107717481,LOC107671247,LOC107571301,LOC107552109 coding upstream 624809 29288138 ~ 29291444 (+)
LOC122335289 myadml2,LOC107671249,LOC107675441,LOC107717480,LOC107571305,LOC107552108,LOC107732151 coding upstream 629071 29284692 ~ 29287182 (+)
G24464 NA non-coding upstream 100606 29814619 ~ 29815647 (+)
LOC122335675 NA non-coding upstream 169378 29726194 ~ 29746875 (+)
G24438 LOC105357980 non-coding upstream 414923 29500518 ~ 29501330 (+)
G24406 NA non-coding upstream 552485 29363551 ~ 29363768 (+)
G24398 LOC107575850 non-coding upstream 567601 29347735 ~ 29348652 (+)
LOC122333787 NA non-coding downstream 44 29921535 ~ 29922299 (+)
LOC122342119 NA non-coding downstream 1674 29923165 ~ 29924120 (+)
G24546 NA non-coding downstream 16932 29938423 ~ 29938813 (+)
G24436 NA other upstream 416134 29499523 ~ 29500119 (+)
LOC122335508 LOC107717477,LOC107698766,LOC107552107,LOC107671248,LOC107740236 other upstream 473280 29439949 ~ 29442973 (+)
LOC122335632 NA other upstream 513650 29391918 ~ 29402603 (+)
LOC122335232 LOC107677928 other upstream 610013 29298708 ~ 29306240 (+)
cenpx stra13,LOC107676172,LOC107689848,LOC107732147,LOC107552128 other upstream 686022 29228716 ~ 29230231 (+)

Expression


Co-expression Network