btbd17b (btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241)


Basic Information

Item Value
gene id btbd17b
gene name btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6304698 ~ 6308852 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234811.1
ATGCTCAGCGATGTGCCAGCGTCCTACATAAAGAGTGTGGGACAGGGAGACTGGGCAGCACAtacagcagagagagaggctgGAGTGGAAAAAAAGGACGACATTGATACAGGACGAGAGATGGTGAACTCCGGAGGAAGCATTCCTGCTGCAGTCTATGTGGCCAACCTTTGCGTTGCACTTTGTGTAGGAGCTGCTCTGAAGTCAGATGTGGTGTTGGAGAACAGTGCTACCACCCTGAACCATTCAATGGCGCTGGTGCAGCGCATGGAGGCCCTGCTGACCCAGGGCAACGGCAGCGACGTGATCCTGCGCGTTCAGACCTTAAACACGGACGAGGTGAAGGTCATCCAGGTCCACTCGCTGGTGTTGACTCTCCAGAGCGACGTTTTTGATGAGCTCCTGCAGACCAGAAACTCCACTGCGATGATCCTCAGAGAGACTCCAGACTGTGCCGCTGTCTTTGATAAGTTCATTAGGTACTTATACTGCGGAGACATCACAGTGCGTCTGAACCAGGCCATTCCTCTTCACAAGCTCGCCAGCAAGTACCACGTGTGGGACCTCCAGCAGGGCCTCACCCAGTACATGAGCCAGCACCTGTCCAGTGACTCGCCCGCGGGTCACGTGGTGAGCTGGTACCAGTACGCCACGCAGATCGGGGACGTGACCCTGCAGAACAGCTGCCTGCAGTATCTGTCCTGGAACCTGTCGTCGGTTCTGCAGAGCGCCGAGTGGAGCTCCGTGAGCGAAGAACTGCTGCTCACCTTGCTCCAGCGTTCGGACCTGGTTCTGCAGAGCGAACTGGAGCTGTATGAAGCCCTGGAGGCCTGGATCAATCAGAACCAGCCTTCGGGCGAGACGGCCGAGAGCGCGCTCAAAGCCATACGCTACGCCATGATATCCCCTCAACACTTGTTCCACCTGCAGAAGAAGTCGCCTGTGATGTTGAAGTATTACGAAACGGTGCGCGATCTTCTCTTCCTCGCCTTCCAGTTCCACGCAGCCTCACCCGTCCAGCTCGCGAAGTACTTCGACGTGAACTGCAGCCTCTTTACGCCTCGTAACTATTTGTCGCCAGCATGGGGCTCTCCGTGGGTCATCAACAACCCAACGCGGGACGATCGCAGCTTCAGTTTTCAGACTCAGCTCGGACCGAGCGGCTACGACGCCAGCAAACGCGTGACCTGGAACGCTCTTTTCTCTCCTCGCTGGCTTCCTCTAAGCGTGCGATCCGCTTATCCGGAGCAGGGCTCCCTGCAACCCACTCGTACCGATGGAGGGCGTCCGCGGATCATCGTCACCCCCGCCACCTCCAGCCCAGACTTTGCCGGCGTCAGCTTTCAAAAGACTGTCATCGTTTCGGCCCGGAAGCAGGGGAAGGTGGTGGTCCGTCACGTCTACAACTTCCACCAGAGCACGGAAGAGGCGGGAGACTTCCTGCTGGAAGCGGACCTGCAGCGTAGAGCGTCTGAGTACCTCATTGACAGCTCGCTCTACCTGCACATTATTGTGAAACCCCTCTATCACAGCCTCATCGTAGCGAAAAAGTAAACCGATGGTTTCTGGTGCCCAATATCTTTGAAAGCCAGTTTTTAcatgcacaaatatatttacgTATACGGATTTGGCAGGTGTTAAGTTGCATTCTGGTGTGCAACACCCAGTTTTCACCATTCAAGCAATTCCCAATGGACAAAATCAAAGTCCACCCTTCTTTTTCTGCTTTAATATCCTGTTTCACTTTGGATATTGCAGAGTTAAAATAGGTTGTGTGTGGTTACTTTAACAAGCTATTTTTAGCATGAAAGCTCACCCTAATTTATTAGCACTTGGAAATCACAATAGTCACATTTGTAACATGTTTGAGTTCAGATTATCATCTAAGTTGTGCGGTGAGCATGCATGAGtccataaaatgaatttttttttttaaaatcttaaaaattgttttttttgcataattaatgcatttgcaAGCATTGTCTTATGTAATACTCTTATTTCATCACTTATGTTGCAattcatgttcattttcattaaaatcacaatttatgAAC

Function

symbol description
btbd17b Orthologous to human BTBD17 (BTB domain containing 17).

NR:

description
PREDICTED: BTB/POZ domain-containing protein 17-like

GO: NA

KEGG:

id description
K24808 BTBD17; BTB/POZ domain-containing protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234811.1 True 2060 mRNA 0.51 4 6304698 6308852

Neighbor

gene id symbol gene type direction distance location
ccdc137 NA coding upstream 875 6299826 ~ 6303823 (+)
pdgfab LOC107718638,LOC107653445,LOC107753752,LOC107563229,LOC107661852 coding upstream 11304 6275898 ~ 6293394 (+)
prkar1b prkar1b,LOC107661853,LOC107653458 coding upstream 39371 6212591 ~ 6265327 (+)
dhps dhps,LOC107661880,LOC107563249,LOC107653447,LOC106592861 coding upstream 194359 6106433 ~ 6110339 (+)
LOC122341440 fbxw9,LOC107661857 coding upstream 350056 5949149 ~ 5954642 (+)
LOC122333921 LOC107693566,LOC107599328,LOC107673775,LOC107693569,LOC107599331,LOC107653436,LOC107565605,LOC107661871 coding downstream 20022 6328874 ~ 6339401 (+)
LOC122341451 LOC107673774,LOC107599333 coding downstream 134005 6442857 ~ 6444787 (+)
si:dkey-120c6.5 LOC107661876,LOC107602705,LOC107711171 coding downstream 137097 6445949 ~ 6449763 (+)
btr02 btr02,LOC107602701,LOC107711172,LOC107722891,LOC107599333,LOC107661870,LOC107673779 coding downstream 141043 6449895 ~ 6455698 (+)
cldnk cldnk,LOC107673780,LOC107602706,LOC107599294,LOC107711173,LOC107661843,LOC105910960 coding downstream 146187 6455039 ~ 6458981 (+)
G17449 NA non-coding upstream 37002 6267397 ~ 6267696 (+)
G17414 NA non-coding upstream 188606 6115704 ~ 6116092 (+)
G17412 NA non-coding upstream 191092 6113206 ~ 6113606 (+)
G17405 LOC107661884,LOC107753766,LOC107565624,LOC107718602 non-coding upstream 356990 5945293 ~ 5947708 (+)
G17337 NA non-coding upstream 552418 5751981 ~ 5752280 (+)
G17521 NA non-coding downstream 7416 6316268 ~ 6316621 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding downstream 37684 6346536 ~ 6353825 (+)
G17524 NA non-coding downstream 108810 6417662 ~ 6418363 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding downstream 127880 6436732 ~ 6436968 (+)
G17584 NA non-coding downstream 166247 6475099 ~ 6475619 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 109660 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 201072 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 341810 5957403 ~ 5962888 (+)
G17302 NA other upstream 706466 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 738724 5557008 ~ 5565974 (+)
G17590 NA other downstream 196063 6504915 ~ 6556750 (+)
LOC122331592 LOC107744988 other downstream 1274502 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1347179 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1499391 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1530104 7838956 ~ 7841669 (+)

Expression


Co-expression Network