LOC122341440 (fbxw9,LOC107661857)


Basic Information

Item Value
gene id LOC122341440
gene name fbxw9,LOC107661857
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5949149 ~ 5954642 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234817.1
GAAGTGTAGTGTTGACAAGCGTCGCTTTGAGATCAATGTAACTGTAATCATATTTTCTCCGATGATCAAAAATACGTTTCGCGCTTCTATGATTTTCCTTTTACATTCTCTGCCTACTTTTAACAAGCGTGAGGAAAAACTTAAGTAAAGACACGGCGAACACAGATGATTTTGTGCAGTGTCATatcaaaatgatcaataatttataacaaaaacCAGTCGGATGAGAAATGTGGATTGTTTATTCTTTCAGTCTGTCTTTGAATACAAggattttttgaataaataagAAAGTGATTCAGCCAATGTCGAGAACAAGCGTCGCTCTGGAGGATGAGGAGAAGCAGCAGAGATGCCCTGCTGATGCCGGTCCACCCGATTTCATCCCAGACACCCCACACTTCTTACCCGAGAGATTGAATTTGGAAGCATCCGTCAGCGCTATGGAGACAAGCCCCTCCCCTTCCAGCAACGGAACCAACCTCCTGTCGTTGCCGTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATCAGTGTGCTGCCACAGGTATGTCAGACCCTGGGAAAGCTTGGCGAGGATCGCTTGGCGTGGCAGCTTCGGGCTCAAAAACTCTCGGGCCCCGCAGCATCTTTCCCAGCCGGGCCGAAGGAGGATTTCGACTGGTCCAAGGCATGTTTGGAAATGGAgcagctgattggctgctggACGGGGCACGAGAATCATGCGGAGACACAGGACGAGGCAGCTGTCGGGGTGAACAGCGAAAACTTGGTGGAGATGCAGCTGGATGTCGAGGTAAACGCTGCAGCGCGGGCCGGAGAAGACGACGTACGAGTTCAGTCCCAGAGTGCCTCTGACGGTCCCCATCTGACCGAGTCATCCGGCACTTCTTCACCCCTGGAGCACATCGTCCTTCCCTCCGGCCACATTGCAGATGTGAATTGCGTCCTCCTGTTGGGCGGAGAAGAGGCGCTGTGTGCCTCCGGCTCGAGGGACCGAAACGTGAACCTGTGGGACCTCCGAGAGGGCCCCAGAGGCAAGCTGATGCACACTCTTGCGGGGCGCGGGACCATTAGCACCCACCGGGGCTGGGTGTGGTGCCTGGCGTCCAGCGGACCTCTGCTGGCGTCTGGCTCGTTTGACAGCACCGTCAGGCTCTGGGATCTGGAAGCCGGAGGAGCAGAGCGGGGACTCATCCAGTGCAAAGCTGCTGTATTGTGTCTGTCCTGCGAGAGGGACACGGTGCTGGCTGGGTCACATGACCAGAAATTAAGCATCTTTGACACCCGAGCCGCAGACCCATTGGTCAAGAGTCTCCGTCTTCACGGTGATGCTGTGTTGTGCCTGGCGTCTGATGACCAGTACATCCTGTCCGGCAGTAAAGACCATACCGTGGCTCTGTTCGACCGCAGGGCGGGAAAACTCCTGCAGAAAGTCCAGCTGAGCTCGTACCTGCTGTCTCTGTCCTGCAGCGGCCGGGAGGTGTGGGCCGGGGATAACCGTGGACTCGTGCACACCTTCTCCCTGCACGGCAGCTCCCTGGCGCCCGTGTCCCAGTTCAACATCCACCGCTCACTGGTCACCGGCGTTCACTACTCTACTGGAGCTCTCTACACGTGCTCCTCCGACCGCACCATCAAGGTCCACCTTCCGTGTGCTCCACCCAAGACCCTGTGTACCCTTCACCATCAGGCAGGAGTTAACGGGTTAAGTGTTGAAGGAGGAACGCTGGCCATCGCCTCCGGTGACATGAACGTGGAAGTCTGGAGGCCCGAGATGCTGAGGGTCTGAAAACGTCTGAAAGTTTCATTGAGTCtagaaacaaaaatatcacattccTAGTTTTCCGTCTT
>XM_043234818.1
GAAGTGTAGTGTTGACAAGCGTCGCTTTGAGATCAATGTAACTGTAATCATATTTTCTCCGATGATCAAAAATACGTTTCGCGCTTCTATGATTTTCCTTTTACATTCTCTGCCTACTTTTAACAAGCGTGAGGAAAAACTTAAGTAAAGACACGGCGAACACAGATGATTTTGTGCAGTGTCATatcaaaatgatcaataatttataacaaaaacCAGTCGGATGAGAAATGTGGATTGTTTATTCTTTCAGTCTGTCTTTGAATACAAggattttttgaataaataagAGTTAATAGGTTTAATGTGAATATCAGAAAGTGATTCAGCCAATGTCGAGAACAAGCGTCGCTCTGGAGGATGAGGAGAAGCAGCAGAGATGCCCTGCTGATGCCGGTCCACCCGATTTCATCCCAGACACCCCACACTTCTTACCCGAGAGATTGAATTTGGAAGCATCCGTCAGCGCTATGGAGACAAGCCCCTCCCCTTCCAGCAACGGAACCAACCTCCTGTCGTTGCCGTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATCAGTGTGCTGCCACAGGTATGTCAGACCCTGGGAAAGCTTGGCGAGGATCGCTTGGCGTGGCAGCTTCGGGCTCAAAAACTCTCGGGCCCCGCAGCATCTTTCCCAGCCGGGCCGAAGGAGGATTTCGACTGGTCCAAGGCATGTTTGGAAATGGAgcagctgattggctgctggACGGGGCACGAGAATCATGCGGAGACACAGGACGAGGCAGCTGTCGGGGTGAACAGCGAAAACTTGGTGGAGATGCAGCTGGATGTCGAGGTAAACGCTGCAGCGCGGGCCGGAGAAGACGACGTACGAGTTCAGTCCCAGAGTGCCTCTGACGGTCCCCATCTGACCGAGTCATCCGGCACTTCTTCACCCCTGGAGCACATCGTCCTTCCCTCCGGCCACATTGCAGATGTGAATTGCGTCCTCCTGTTGGGCGGAGAAGAGGCGCTGTGTGCCTCCGGCTCGAGGGACCGAAACGTGAACCTGTGGGACCTCCGAGAGGGCCCCAGAGGCAAGCTGATGCACACTCTTGCGGGGCGCGGGACCATTAGCACCCACCGGGGCTGGGTGTGGTGCCTGGCGTCCAGCGGACCTCTGCTGGCGTCTGGCTCGTTTGACAGCACCGTCAGGCTCTGGGATCTGGAAGCCGGAGGAGCAGAGCGGGGACTCATCCAGTGCAAAGCTGCTGTATTGTGTCTGTCCTGCGAGAGGGACACGGTGCTGGCTGGGTCACATGACCAGAAATTAAGCATCTTTGACACCCGAGCCGCAGACCCATTGGTCAAGAGTCTCCGTCTTCACGGTGATGCTGTGTTGTGCCTGGCGTCTGATGACCAGTACATCCTGTCCGGCAGTAAAGACCATACCGTGGCTCTGTTCGACCGCAGGGCGGGAAAACTCCTGCAGAAAGTCCAGCTGAGCTCGTACCTGCTGTCTCTGTCCTGCAGCGGCCGGGAGGTGTGGGCCGGGGATAACCGTGGACTCGTGCACACCTTCTCCCTGCACGGCAGCTCCCTGGCGCCCGTGTCCCAGTTCAACATCCACCGCTCACTGGTCACCGGCGTTCACTACTCTACTGGAGCTCTCTACACGTGCTCCTCCGACCGCACCATCAAGGTCCACCTTCCGTGTGCTCCACCCAAGACCCTGTGTACCCTTCACCATCAGGCAGGAGTTAACGGGTTAAGTGTTGAAGGAGGAACGCTGGCCATCGCCTCCGGTGACATGAACGTGGAAGTCTGGAGGCCCGAGATGCTGAGGGTCTGAAAACGTCTGAAAGTTTCATTGAGTCtagaaacaaaaatatcacattccTAGTTTTCCGTCTT
>XM_043234819.1
GAAGTGTAGTGTTGACAAGCGTCGCTTTGAGATCAATGTAACTGTAATCATATTTTCTCCGATGATCAAAAATACGTTTCGCGCTTCTATGATTTTCCTTTTACATTCTCTGCCTACTTTTAACAAGCGTGAGGAAAAACTTAAGTAAAGACACGGCGAACACAGATGATTTTGTGCAGTGTCATatcaaaatgatcaataatttataacaaaaacCAGTCGGATGAGAAATGTGGATTGTTTATTCTTTCAGTCTGTCTTTGAATACAAggattttttgaataaataagGTTTAATGTGAATATCAGAAAGTGATTCAGCCAATGTCGAGAACAAGCGTCGCTCTGGAGGATGAGGAGAAGCAGCAGAGATGCCCTGCTGATGCCGGTCCACCCGATTTCATCCCAGACACCCCACACTTCTTACCCGAGAGATTGAATTTGGAAGCATCCGTCAGCGCTATGGAGACAAGCCCCTCCCCTTCCAGCAACGGAACCAACCTCCTGTCGTTGCCGTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATCAGTGTGCTGCCACAGGTATGTCAGACCCTGGGAAAGCTTGGCGAGGATCGCTTGGCGTGGCAGCTTCGGGCTCAAAAACTCTCGGGCCCCGCAGCATCTTTCCCAGCCGGGCCGAAGGAGGATTTCGACTGGTCCAAGGCATGTTTGGAAATGGAgcagctgattggctgctggACGGGGCACGAGAATCATGCGGAGACACAGGACGAGGCAGCTGTCGGGGTGAACAGCGAAAACTTGGTGGAGATGCAGCTGGATGTCGAGGTAAACGCTGCAGCGCGGGCCGGAGAAGACGACGTACGAGTTCAGTCCCAGAGTGCCTCTGACGGTCCCCATCTGACCGAGTCATCCGGCACTTCTTCACCCCTGGAGCACATCGTCCTTCCCTCCGGCCACATTGCAGATGTGAATTGCGTCCTCCTGTTGGGCGGAGAAGAGGCGCTGTGTGCCTCCGGCTCGAGGGACCGAAACGTGAACCTGTGGGACCTCCGAGAGGGCCCCAGAGGCAAGCTGATGCACACTCTTGCGGGGCGCGGGACCATTAGCACCCACCGGGGCTGGGTGTGGTGCCTGGCGTCCAGCGGACCTCTGCTGGCGTCTGGCTCGTTTGACAGCACCGTCAGGCTCTGGGATCTGGAAGCCGGAGGAGCAGAGCGGGGACTCATCCAGTGCAAAGCTGCTGTATTGTGTCTGTCCTGCGAGAGGGACACGGTGCTGGCTGGGTCACATGACCAGAAATTAAGCATCTTTGACACCCGAGCCGCAGACCCATTGGTCAAGAGTCTCCGTCTTCACGGTGATGCTGTGTTGTGCCTGGCGTCTGATGACCAGTACATCCTGTCCGGCAGTAAAGACCATACCGTGGCTCTGTTCGACCGCAGGGCGGGAAAACTCCTGCAGAAAGTCCAGCTGAGCTCGTACCTGCTGTCTCTGTCCTGCAGCGGCCGGGAGGTGTGGGCCGGGGATAACCGTGGACTCGTGCACACCTTCTCCCTGCACGGCAGCTCCCTGGCGCCCGTGTCCCAGTTCAACATCCACCGCTCACTGGTCACCGGCGTTCACTACTCTACTGGAGCTCTCTACACGTGCTCCTCCGACCGCACCATCAAGGTCCACCTTCCGTGTGCTCCACCCAAGACCCTGTGTACCCTTCACCATCAGGCAGGAGTTAACGGGTTAAGTGTTGAAGGAGGAACGCTGGCCATCGCCTCCGGTGACATGAACGTGGAAGTCTGGAGGCCCGAGATGCTGAGGGTCTGAAAACGTCTGAAAGTTTCATTGAGTCtagaaacaaaaatatcacattccTAGTTTTCCGTCTT

Function

symbol description
fbxw9 Orthologous to human FBXW9 (F-box and WD repeat domain containing 9).

NR:

description
PREDICTED: F-box/WD repeat-containing protein 9 isoform X2

GO: NA

KEGG:

id description
K10265 FBXW9; F-box and WD-40 domain protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234817.1 False 1870 mRNA 0.55 8 5949149 5954642
XM_043234818.1 True 1897 mRNA 0.54 8 5949149 5954642
XM_043234819.1 False 1888 mRNA 0.54 8 5949149 5954642

Neighbor

gene id symbol gene type direction distance location
slc25a19 slc25a19,LOC107661860,LOC107563233,LOC107565621,LOC107653449,LOC107718625 coding upstream 6563 5937432 ~ 5942586 (+)
amdhd2 amdhd2,LOC107661858,LOC107718599,LOC107653464,LOC107753757 coding upstream 15502 5925229 ~ 5933647 (+)
tufm tufm,LOC107718598,LOC107659578,LOC107731475,LOC101070424,LOC106931188 coding upstream 127257 5817043 ~ 5821892 (+)
gcdhb gcdhb,gcdh,LOC107718595,LOC107653471,LOC107731476,LOC107563244,LOC102794743 coding upstream 368408 5574401 ~ 5580741 (+)
LOC122331145 NA coding upstream 374935 5566565 ~ 5574214 (+)
dhps dhps,LOC107661880,LOC107563249,LOC107653447,LOC106592861 coding downstream 151791 6106433 ~ 6110339 (+)
prkar1b prkar1b,LOC107661853,LOC107653458 coding downstream 257949 6212591 ~ 6265327 (+)
pdgfab LOC107718638,LOC107653445,LOC107753752,LOC107563229,LOC107661852 coding downstream 321256 6275898 ~ 6293394 (+)
ccdc137 NA coding downstream 345184 6299826 ~ 6303823 (+)
btbd17b btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241 coding downstream 350056 6304698 ~ 6308852 (+)
G17405 LOC107661884,LOC107753766,LOC107565624,LOC107718602 non-coding upstream 1441 5945293 ~ 5947708 (+)
G17337 NA non-coding upstream 196869 5751981 ~ 5752280 (+)
G17312 LOC107550264,LOC107659563,LOC107653452,LOC107563254,LOC107718634 non-coding upstream 212024 5735089 ~ 5737125 (+)
G17322 NA non-coding upstream 253513 5690535 ~ 5695636 (+)
G17315 NA non-coding upstream 301070 5647245 ~ 5648079 (+)
G17412 NA non-coding downstream 158564 6113206 ~ 6113606 (+)
G17414 NA non-coding downstream 161062 6115704 ~ 6116092 (+)
G17449 NA non-coding downstream 312755 6267397 ~ 6267696 (+)
G17521 NA non-coding downstream 361626 6316268 ~ 6316621 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding downstream 391894 6346536 ~ 6353825 (+)
G17302 NA other upstream 350917 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 383175 5557008 ~ 5565974 (+)
nfil3-2 nfil3-2,LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 other upstream 468542 5415758 ~ 5480607 (+)
elof1 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058,LOC103384163 other upstream 636778 5310493 ~ 5312371 (+)
G16981 NA other upstream 1042183 4905656 ~ 4906966 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other downstream 2761 5957403 ~ 5962888 (+)
fbxw9 fbxw9,LOC107661857 other downstream 143559 6098201 ~ 6103626 (+)
LOC122341437 LOC107718607,LOC107653460 other downstream 232166 6186808 ~ 6195038 (+)
G17590 NA other downstream 550273 6504915 ~ 6556750 (+)
LOC122331592 LOC107744988 other downstream 1628712 7583354 ~ 7591526 (+)

Expression


Co-expression Network