si:dkey-120c6.5 (LOC107661876,LOC107602705,LOC107711171)


Basic Information

Item Value
gene id si:dkey-120c6.5
gene name LOC107661876,LOC107602705,LOC107711171
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6445949 ~ 6449763 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234838.1
GTCAAGAGAAAAACAATGTTTGTACTTTCATTTTCGCAATTTGACGGGATTTCGATCTGCggcttttttttgcacttttatcaACCTGTACTTTGATTTAACCCACGGAAAACAGgATAACATATCCTGAATTCTTTAACCTCTGTGAGTGCTACACTTAAGATGGCATCAGTCCAAGGAAAACCACGGAGAAGACACAGCTTAGACAGTCCACCTAACATAAGCAGAGAAACCCCACTGAGGATGCTGGTCTTTGGCGACTCCAGTAAGGATCAGATCTCACTGACACGGTCTGTGCTGGGACAAGACGTCTTTACCGGAGATGAAGTCAATATTTCAACGACCGAGAAAAGTTCAGGGGTTGTGCAGGATAGAGACATAATCCTAGTCAACCTACCAAATCTTCAGGATAACAACTTGCCACACAGTATACTTCATAAGGAGTTTAGGAAGGCAGTTTGTTTCTCATGTCCTGGTCCTCATGCTGTGGTGTTTGTTGTGGACCCATTTAACCTGACCTCTGATACTACGGACACACTGAAGCACATGGTACACTACTTTGGGGAACGTGTCTTGAAGCACACATTGATTGTTTTATACCATGAGCGAGGCATGAGAGATCTGTCCATAGAAGATGTGGTAAAAATGAACAAGAGCTTTAGAGAGCTTGCTGAGAAATGTAGCCAGAACTACATCTTCTacaatgaagaaataaaccGGAGCGAGTGTAGCCAGACACGAGCATTGCTCACCCAAGTGGATGAGATGGTCTCGGAGCATGGGATGTTTTCAAACATGGAATTCAAGGATGCCGAAAAAAGAATTCAGATAGAGGAGCGTTTCATCCATAAATCGAAGGAGAAAGAGATCAGGGAGGCATTGAAGGTGCTGGAGAAACTACATTCAGGAGAAGAGCTTGCCGGTGAGACCCTGAAGTATGAAGAGAAGATGCGGCTGAAGTGCAGAGAGAAAGCAGAGCTGGTTGTTGCAGACAAGCTTGGCTTTACTGTAAGAGTTGTTGACTATGCTGTTGCAGTGGGAAAAGGAGCGTTTGTGGGTGCATTTCTGGGATTTGCAGTAGGATATGAAGGCATGGTGGTGGGAGCTGCTGCTGGGGCTGTTCTTGGTGCTGCGCTTGGAGGTGCAGCTAATGCAGCGTGGAGCTACATTTACAAATCCTTTACAGATGCACGGGGGGCTACTTAGGGGCTACTTAGTATATAGTTTTGTTggtaaaacatgaaataatacaATAGTGTGTCTACAATTGCACTCAATATTCACACAATTGAGCGTAGGAAGCTCAATATTCACACAAtaactttttgatattttttgccCTCGTAACTTATAGGGGCATTTTTTACATGGCAATAGACTGCATCATGCAGTAAATGCTTGCggacttgtgttttttttttctttgcagagCAACATTACTTGATAACGTGAGCTCACATATCATTAAAACAACTATTATATCCTCGACAGTCGCACACCTCTACCTTTCGCTAATCATCTAACGCATATTGCAGTTAGAAGCTGATTTGGTTAGCTTTAAACATTGTCTGGAAGTAaagaaagtatgtttttttaatccacGATTAAGTAAAGTCAATACATTTGCCAATGCTTGTCCCAGTTTTGTGGGCAGCTGCTGAGTTCCGGTCCCAAATTAAGGTCTTTTCTCTACCTTTacctttttttcataattaaatgtaaaaaaataaaagccactaggaaaacacaaactataaaaacatactttaacttaatttaaattctaaacTTATAAAGATagtaaagttatttataaatcaTGATGTGTAATCGCCAATCAATCTGTAATGCTATAAAAGTGTCTGACTCAGCTGCCACATCTGACCGTGACGTCTATATATAGCCATTATTTTGTAATCAAAACGGAAATCGTTATTGCCGGTCTTCGACAAtaattcaaatcattttaatgcattaacgtCAAAGCATTATAAGGATTTTTGCTACTATTCAATTTAGGGCATGTCTGAACTTTTGGGGGGCGACgtgtgaatgtatttttaatatatatttgtttataaatgtgaatatgtttgtataatatattttatatgagatgtcttttatttgtaaagaaaatgtacatCAATTATTTAGTATGAAATCTGTTGTATTAATCTGtacatttgatattttgtctaaattatAGGAATAAAATCTACTGC

Function

NR:

description
GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234838.1 True 2225 mRNA 0.39 3 6445949 6449763

Neighbor

gene id symbol gene type direction distance location
LOC122341451 LOC107673774,LOC107599333 coding upstream 1162 6442857 ~ 6444787 (+)
LOC122333921 LOC107693566,LOC107599328,LOC107673775,LOC107693569,LOC107599331,LOC107653436,LOC107565605,LOC107661871 coding upstream 106548 6328874 ~ 6339401 (+)
btbd17b btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241 coding upstream 137097 6304698 ~ 6308852 (+)
ccdc137 NA coding upstream 142126 6299826 ~ 6303823 (+)
pdgfab LOC107718638,LOC107653445,LOC107753752,LOC107563229,LOC107661852 coding upstream 152555 6275898 ~ 6293394 (+)
btr02 btr02,LOC107602701,LOC107711172,LOC107722891,LOC107599333,LOC107661870,LOC107673779 coding downstream 132 6449895 ~ 6455698 (+)
cldnk cldnk,LOC107673780,LOC107602706,LOC107599294,LOC107711173,LOC107661843,LOC105910960 coding downstream 5276 6455039 ~ 6458981 (+)
hgs hgs,LOC107661832,LOC107673777 coding downstream 10982 6460745 ~ 6473566 (+)
mrpl12 mrpl12,LOC107661846,LOC107722894,LOC107711195,LOC107673776,LOC107599340,LOC107602707,LOC106606250 coding downstream 26946 6476709 ~ 6480102 (+)
slc25a10a si:ch1073-100f3.2,slc25a10,LOC107711196,LOC107747133,LOC107569289,LOC100693267 coding downstream 32389 6482152 ~ 6489059 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding upstream 8981 6436732 ~ 6436968 (+)
G17524 NA non-coding upstream 27586 6417662 ~ 6418363 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding upstream 92124 6346536 ~ 6353825 (+)
G17521 NA non-coding upstream 129328 6316268 ~ 6316621 (+)
G17449 NA non-coding upstream 178253 6267397 ~ 6267696 (+)
G17584 NA non-coding downstream 25336 6475099 ~ 6475619 (+)
G17630 NA non-coding downstream 173925 6623688 ~ 6625296 (+)
G17662 NA non-coding downstream 254651 6704414 ~ 6704702 (+)
G17663 NA non-coding downstream 255432 6705195 ~ 6705405 (+)
G17683 NA non-coding downstream 397175 6846938 ~ 6847606 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 250911 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 342323 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 483061 5957403 ~ 5962888 (+)
G17302 NA other upstream 847717 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 879975 5557008 ~ 5565974 (+)
G17590 NA other downstream 55152 6504915 ~ 6556750 (+)
LOC122331592 LOC107744988 other downstream 1133591 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1206268 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1358480 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1389193 7838956 ~ 7841669 (+)

Expression


Co-expression Network