fam83fa (fam83fa,LOC107690234,LOC107551173,LOC107732892,LOC107561349,LOC107680871,LOC107733829)


Basic Information

Item Value
gene id fam83fa
gene name fam83fa,LOC107690234,LOC107551173,LOC107732892,LOC107561349,LOC107680871,LOC107733829
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 10607636 ~ 10617581 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234869.1
gttttattgtagtaaaagtGTACTAACCATGGATTTGTAcaagcacaatttttttttacaaataccaTGGTCAGACTATAGTGTAGCAAAACTATGGTTAACTTGTGTTTATAATGGTTTAACTATAGTAAAactatgtttgtttgtttttgtaagggtaaatacattttattttggtaccactttattttacagtcatgTAACTCGTatacatactatgtacttattaGGCCTATAGTACTGACAAGAACTAGGTAATGACTAGGTACTACTAACCCTGGACCTACCCCTAAAACTAACAATACCCCATGCGGGTTAACTTATATCCAAAATTACCAATTAcaagtactgtaaaataaagtgcaaccattattttatttgtttaatgttgttattattgtttagttttattgttatttatttttaaagctttttattaGTGGTACTTGTATTGTATTTGACAAAAAGTTGGCGTCAGTCACGGAAACGTGACGGTTTCATCCGTGTTTATTTTGAGTTAAACAAGTGTCGTCATGTCAATTCACAAGAACCTTCGTAGAGAGCGGGCTGAAGGCCCGCCCACCACGCTAGCGAAGCCCCGCCCACCCATTATCTGTTTTCTAGCTCAGAAACACCTCAACCAACCACTCAAACAGGTAAAGGTGTGCTGAGCGTTCTGCTCGGAGCCACGCAGGTGAACCGTTGTTTCCGGGAGCACAGCTGCCATGGCTGAGTCTCAGCTAGTCTGCATGGACGACGAACATGTTAACGTGAAGATACCGGAGTCCAAACCGGAGTTTTATTACAGCGAGGAGCAGCGGGCCGCGCTCGAGCAACTCTTAAAGAACGGGGATGGCGCGTTCAAGATGCGTCTCAAAGAGGATAACGTTAAAGACTTTCTCTCCGCGAGGGAAGTCAAATGGATGCGGGACACTTTCCAGGAGTATGAGAGCGACTCGGACACCTGCTGCTCGAGGTCGCCGCATGATACGAGTGAAGACTCGGGTGTGCACTCAACCTACTGGCCGACCATGTCTGATACGGAGATCCCTCCGCTGGACATCGGTTGGCCCAGTAACGGCCATTACAAAGGGGTAACTCGGGTGTCGGTTTACACCCATCCACCCAAAACCAACAGTCCGCATATTAAAGAGGTGGTCCGCAGACTTATTCAAGAATCCACAAAGTTGGTGGCAGTGGTCATGGACCTGTTGACGGACCTGCTGATCCTGCAGGATCTTTTAGATGCCGCGAGTAAGAGAGGGGTGGCCGTGTACTTGCTGCTGGAGGAGCACGGCTTGCCTCACTTCCTGGACATGAGCAGCAGGCTGCAGATTTCTGCACAGCACCTGAGGAACCTGCGTGTGCGAACTGTGAGAGGATCCGGCATGCCGCTGTCCTTTGGTCGTCTGCCAGGATCGCTGTGCTCCAAGTACATGTTGGTAGATGGAGAGAAAGTCATGTTTGGATCATACAGTTTTACGTGGAGTTCCTCGAGGATGAACCGCAACACAATCACTGTGATGTCAGGTCAAGTTATTGACTTCTTCGACAATGACTTCAGAGAGCTGTATGCCGTGTCTGATAAAGTGGACCTGTATCGTGAGTTTCACATCAGTAAGCCGGCCCTGCCGGTTCCTGTGCTGAAAACACCAGCAGAACCAAACAAACTCACAGTTCCTGTGACCACGTCACGCTTCCAGATCTCTGTAGGGGACACCAAACAGGCCGACTTAAAGGTGCCTGCACATAAATACCATAATCCTAAGTACTCTTTAGTCGTGGGCAACAGTCTAGGCGTGACTGGCTCCTTGCAGGATCTTTCTAAGCTGAGAGACTATGTTGATCATGCCTCTGTGAATAACATGGAAAAATTAATCTACACTAATGGAGACAGCATACGTCCGCAGTCCCCTGCATCCCCAGATGGGACAGAGGATGGGAAGAGCGATGGGAAGAAGCCTTCGCTGTTTGGTTCTAAAAAGCAGCGCTCTTCCTTCCGGCATTTCTTGAAGGGCAGAGCAAACAACCAGAGTCCAGACGCTCTCTCTAAAACAACTCTTCAAAGCACAGATGTGAAACAGATCAGTCATAAAGACACTAAGATTACCAGCAGCTCCAAAGAGTCGTCTTGGTTGGTCAATCATATTAATGAGCAGGAAGATGCATCCAAACATGTCACTCCTGCTCCTCGCAAGATCTCAGACACTGACAGCATTGGTGAAGTTGAAGACACGTTTGAGATGATAGAGAGTCCACCACAGGTGAAGTTTAAACTCAGGAAGAACAAAATGGGTCCAAGAAGTGTTTCTCTTCAGACTATTGCCACAGATGGTGAGGATGgCCTGAAAGGGCGGAGGCGTAACCAGAAGAAGGCCTGCATTCAGTCCTGAGGTATCTCTGCAAAGGAATCAACAAGAACGTGTGCCTATAGATCGGGATTTTGGATATTAGGACATGTTTCAAAGAGAATATTAACgatatattctgaaaaaaagaggacatttatttttattatgttcagTTTGGACAAGATCTGGATAGTGATTCtccttataataatattgtttcagCTGTCAGCTGAAAAACAAAGTATTGGTGCTGTGTTTTCAAAAGGATGTGAGGTTATTTGAACCACCAAAATGCTGTTGACACTGTGAGGAGCAGgtggcaggaaaaaaaagactgaattgTAGCGTGCTTTCTGTGATCATGTGACCTGGCGGTTACAGCTTTGAATGTAAGAGTGAAGATGTAGCATGTTACACATACTTCCTGTTGAGCAGATCTTTGGCCTGTATATTTACCCAGGAGTAATCAGTTGCACTTACCCAATCCTCAAGCCTGTGACCTCCTCTTGAGTCATAAAGGAAAGAGGGAAAAGCTCCATAGCAAAGCTGACAGATGAAAACACGACTGATCGGTTATCACTGAAGGTGCAGTCACGCGTACTATTTCTCAGCAAAATTTCGCAGGCGAAATCCAATCATTTCAATAGgaatctgtaatattgtgagTTTTGCTTGAACCTTCCGCACACTGATTTAATTTGGTCCGACAAAATCACTGCACTGGCGTTCGAGCTGCTTGTTTAGAAAGTgaccaaccaaaaaaaaaaaaaagtccagcaACGTAAAATGAATGGCTTTATATGTACATGGACCGATTTGTACACATtcattactttattaatataaatttcacTGCTTTCTCTTTAAGAATTCCCACGGAACACATTCTTGATTTAAAGATGCGTAACAAAACAGCGGAATGTATAAGAACGTCTTGAGGGGGTTTTATAATAAATGGCAGACATCTGTTTtgcatgtttacataaaaaaacaattacagtgCAGCATAGTGGAAGACAAAAACGTGTTCTGCGTGAACTAATGGCGCTTGGAAATAATAGATGTTATGCAATAGATTTTTAGATCAAGAGTGCCAATAAATAAAGGGCTGTGgccttaaatgtt

Function

symbol description
fam83fa Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Orthologous to human FAM83F (family with sequence similarity 83 member F).

NR:

description
PREDICTED: protein FAM83F-like

GO: NA

KEGG:

id description
K23930 FAM83; protein FAM83

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234869.1 True 3476 mRNA 0.44 5 10607636 10617581

Neighbor

gene id symbol gene type direction distance location
grap2a grap2a,LOC107690235,LOC107680873,LOC107561352,LOC107732893,LOC107733828,LOC107551143 coding upstream 127 10595644 ~ 10607509 (+)
cacna1ia LOC107690236,LOC107733827,LOC107561340,LOC107680839 coding upstream 36409 10422746 ~ 10571227 (+)
LOC122341728 lgals2a,LOC107690239,LOC107733834,LOC107568668,LOC107680883,LOC107568169 coding upstream 206591 10397843 ~ 10401045 (+)
alg1 alg1,LOC107733873,LOC107690237,LOC107738611,LOC107680860 coding upstream 213292 10390510 ~ 10394344 (+)
flr flr,LOC107568145,LOC107733869,LOC107738612,LOC107568167,LOC107680859 coding upstream 221993 10374102 ~ 10385643 (+)
rac2 rac2,LOC108276437,LOC107561353,LOC108436672,LOC107551172 coding downstream 8581 10626162 ~ 10638596 (+)
sstr3 sstr3,LOC107690333,LOC107551151,LOC107680846,LOC107561344,LOC107732886 coding downstream 28323 10645904 ~ 10661084 (+)
eif3d eif3d,LOC107732884,LOC107690232,LOC107680878 coding downstream 54942 10672523 ~ 10678681 (+)
cacng2a cacng2a,cacng2,LOC107561356,LOC107680886,LOC107732897,LOC107729558,LOC107687643,LOC108434911 coding downstream 93746 10711327 ~ 10769397 (+)
ifi35 LOC107729476,LOC107687635,LOC107551164,LOC107680855,LOC107561363,LOC107732881 coding downstream 200149 10817730 ~ 10820947 (+)
G18747 NA non-coding upstream 17817 10589522 ~ 10589819 (+)
G18744 NA non-coding upstream 28492 10571819 ~ 10579144 (+)
G18671 NA non-coding upstream 305586 10273974 ~ 10302050 (+)
G18517 NA non-coding upstream 664483 9865786 ~ 9943153 (+)
G18757 NA non-coding downstream 21508 10639089 ~ 10639293 (+)
G18763 NA non-coding downstream 45665 10663246 ~ 10664532 (+)
G18792 NA non-coding downstream 82696 10700277 ~ 10700619 (+)
G18790 si:ch73-233k15.2,LOC107690330,LOC107729516,LOC107561347,LOC107680847,LOC107732904 non-coding downstream 83206 10700787 ~ 10701636 (+)
G18794 NA non-coding downstream 84713 10702294 ~ 10702806 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other upstream 504175 10025818 ~ 10103461 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other upstream 807840 9798815 ~ 9799796 (+)
G18491 NA other upstream 857756 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 909721 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 1421976 9184399 ~ 9185660 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 74309 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 135178 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 716160 11333741 ~ 11335825 (+)
G18949 NA other downstream 751312 11368893 ~ 11369752 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other downstream 1155619 11773200 ~ 11833924 (+)

Expression


Co-expression Network