grap2a (grap2a,LOC107690235,LOC107680873,LOC107561352,LOC107732893,LOC107733828,LOC107551143)


Basic Information

Item Value
gene id grap2a
gene name grap2a,LOC107690235,LOC107680873,LOC107561352,LOC107732893,LOC107733828,LOC107551143
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 10595644 ~ 10607509 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234873.1
ACAAAGGTTCCGCTCGTTCCCGTGAGTGCGTGGCGTGCCGAGCGGAGCGCGCAGGTAGCGGACTAGCGCTTGAGTAGCGCGCTGTGTGATTTGATACGGCGACTTCTGCTGCAGGTGCTTTGCTTTTTGCCGGACAGTGAAACAGCGAGACTGAGTTGGAGCTGTGATGGCCTTCTGAAATGTGCTAAACAAGTGTCAACATCCTCTGATCACAGGATTTGTATTATATTTGTAGAGCCCTCCCCTCCGTTCAACTTCTCAGCATCTGACCATGGAGGCCAGAGGAAAGTATGACTTCAATGGCACAGCAGAAGATGAGCTCAGCTTCCGGAAAGGAGACATTCTGAAGATCCTGGGATCTCAAGACGACTGGTTCAAGGCAGAGCTGCATGGTCATGAGGGCTATATACCTAAAAACTATGTTGACATGCAAAATCTGAGCTGGTTCAAAGAGAATGCCAGTCGTGGCTCGGCTGAGGAGATGCTCATGTCCCGAGAAGTGGGTGCTTTCCTGATCCGTGGTAGCCAGAGTTCCCCTGGAGACTTCTCCATTTCAGTCAGACACGAGTATGATGTACAGCATTTTAAAGTTATGAAGGATAAATCGTGCCAGTACTACCTGTGGACGGAGAAGTTTAACTCTCTAAACAAGCTTGTGGACTTCTACAAGACCACCTCCATATCCAAGCAGAGGGAGATCTTCCTTAGGGACGGAAGTGGGAATGAGCCACGAGCGCCTCCACCTTTAAGGAGTCAACCAGAAGTTCGGCCTTCCCCAGGTGGTGGTTATGGCGGTCCCCCAACCTCATCACAACACCGCAGCACATCAGATCAAACTCAAAACCAGAAGAGTAAGAGAGGAAGTCTTGAGGAGAAGGCTAACACTGTGGGACACCAAGGGAGGAGCAGCCCAGCCCCTCGGCGAATCTCTGAAACTTTGCCTGCTCAGaggCCAACCATACAGGTGAGAGCAATGTATGACTTCACAGCAGAGGAAGATGACGAGTTGGGCTTCAGTTTCGGTGAAATCATTGAAGTACTGGACCATTCTGATGCATCGTGGTGGCAAGGTCGATTGCGAGGCCGGACTGGTCTTTTCCCTGCTAATTACACAGAACCGATGTGATCTGAGGTGTGGAATCACTAAGAGTCAAATCCATCAATCGCTTACCAAATGCCTGTCAATAATGTATGGACTGATTGATTATttgaaattacttttataaaactgGCTACAGAACTGTGGAGGAgaagtgagaaaaaaagactttgcTGCCCTTTCAtatgtgtaattttttataCATACTTTTTATGGTACGAAGAAAGAACTATACCATTTCTCTTAtgtgtcaattttttttaatgactagACATTTCTCTTATATGAATTGATGAATAATACAGTACATAGTCCTTAGAGTGACCCCTCAGTAcgtgtttatattttaagatgttcaGTAGGACACACTAACACAAGATACAGTGTTACAGTAAGCAATGTTTTATGTTACTGTACCCATTTTTGTATTAAGAAGAGACTTTTTAACAAATCTGATTTGTCAAAATAGGCACCGGCAGGAGAGGTAtgataattgttttattgtacaaGATGGAAAATACAGATGGCAAATATGGTAATAACAGCAGACTTGAATAAATCTTTCTGCTTTCAAATATCAA

Function

symbol description
grap2a Human ortholog(s) of this gene implicated in hepatitis C. Orthologous to human GRAP2 (GRB2 related adaptor protein 2).

NR:

description
PREDICTED: growth factor receptor-bound protein 2-like

GO: NA

KEGG:

id description
K07366 GRAP2, GADS; GRB2-related adaptor protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234873.1 True 1680 mRNA 0.45 9 10595644 10607509

Neighbor

gene id symbol gene type direction distance location
cacna1ia LOC107690236,LOC107733827,LOC107561340,LOC107680839 coding upstream 24417 10422746 ~ 10571227 (+)
LOC122341728 lgals2a,LOC107690239,LOC107733834,LOC107568668,LOC107680883,LOC107568169 coding upstream 194599 10397843 ~ 10401045 (+)
alg1 alg1,LOC107733873,LOC107690237,LOC107738611,LOC107680860 coding upstream 201300 10390510 ~ 10394344 (+)
flr flr,LOC107568145,LOC107733869,LOC107738612,LOC107568167,LOC107680859 coding upstream 210001 10374102 ~ 10385643 (+)
sept12 sept12,LOC107690244,LOC107568113,LOC107738615,LOC107685931,LOC107733855 coding upstream 299243 10242510 ~ 10296401 (+)
fam83fa fam83fa,LOC107690234,LOC107551173,LOC107732892,LOC107561349,LOC107680871,LOC107733829 coding downstream 127 10607636 ~ 10617581 (+)
rac2 rac2,LOC108276437,LOC107561353,LOC108436672,LOC107551172 coding downstream 18653 10626162 ~ 10638596 (+)
sstr3 sstr3,LOC107690333,LOC107551151,LOC107680846,LOC107561344,LOC107732886 coding downstream 38395 10645904 ~ 10661084 (+)
eif3d eif3d,LOC107732884,LOC107690232,LOC107680878 coding downstream 65014 10672523 ~ 10678681 (+)
cacng2a cacng2a,cacng2,LOC107561356,LOC107680886,LOC107732897,LOC107729558,LOC107687643,LOC108434911 coding downstream 103818 10711327 ~ 10769397 (+)
G18747 NA non-coding upstream 5825 10589522 ~ 10589819 (+)
G18744 NA non-coding upstream 16500 10571819 ~ 10579144 (+)
G18671 NA non-coding upstream 293594 10273974 ~ 10302050 (+)
G18517 NA non-coding upstream 652491 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding upstream 684032 9910957 ~ 9911612 (+)
G18757 NA non-coding downstream 31580 10639089 ~ 10639293 (+)
G18763 NA non-coding downstream 55737 10663246 ~ 10664532 (+)
G18792 NA non-coding downstream 92768 10700277 ~ 10700619 (+)
G18790 si:ch73-233k15.2,LOC107690330,LOC107729516,LOC107561347,LOC107680847,LOC107732904 non-coding downstream 93278 10700787 ~ 10701636 (+)
G18794 NA non-coding downstream 94785 10702294 ~ 10702806 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other upstream 492183 10025818 ~ 10103461 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other upstream 795848 9798815 ~ 9799796 (+)
G18491 NA other upstream 845764 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 897729 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 1409984 9184399 ~ 9185660 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 84381 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 145250 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 726232 11333741 ~ 11335825 (+)
G18949 NA other downstream 761384 11368893 ~ 11369752 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other downstream 1165691 11773200 ~ 11833924 (+)

Expression


Co-expression Network