hsd3b7 (hsd3b7,LOC107582995,LOC107658501,LOC107729456,LOC107737759,LOC107554123,LOC107689649)


Basic Information

Item Value
gene id hsd3b7
gene name hsd3b7,LOC107582995,LOC107658501,LOC107729456,LOC107737759,LOC107554123,LOC107689649
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12216611 ~ 12230379 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234932.1
TTgaagaaaatgacatttactgAGAGTTGAGCGGCTGAGCGGCTGACCGGCTCGGTAAACACTGACGGATAAACGCTCCAGTCAACACCGGGAGAGGATTCAACGGACTAATAATATGTCTCGTGAGAAATCGAAGTTGACCTACGTAATAACAGGAGGATGCGGCTTTCTCGGGCAGCACCTGTTGAGGGTTTTGCTGGAGAAGGAAGAAAATATCAAAGAGATAAGGCTTTTCGACAAAAATGTCTACCCGAGTCTGCAAAGTCGCAGTACAGAGCATGTGAAGGTGGTGGCGGTACCTGGAGATATAACAGATTATGGGAGCGTACGTGATGCCTTTCAGGGAGCAGACCTGGTCTTCCACGCAGCTAGTTTGGTTGACGTGTGGTATAAGGTCCCTGAGAAGGCAATCTACGCTGTAAATGTACAAGGgactgaaaatgtaataaacgcATGCGTGGAAATCGGTATTCAGCATTTGATCTATACAAGCTCCATGGAGGTGGTTGGTCCGAATGTAAAAGGAGATACATTCATCAGAGGGAATGAGGATacttcatataatatataccaTGAGATGCCCTATCCTAAGACCAAAGCTGCAGCTGAGAAAATGGTGATAGGAGCCAATGGCACAAAGGTAAAGGGAGGGAACACTCTCTACACATGCTCACTGCGGCCAACAGGTATCTACGGGGAAGAGCATCAGCTCATGAAGGACTTCTATCAGAATGGGGTGCGGACAGGTGGCTGGGTGATCAGAGGAGTTCCACGGAACACAGAGCACGGAAGGGTCTATGCAGGGAACGTGGCATGGATGCACCTGCTAGCAGCGCGCGCTCTGCGGGAGCATCCCGATAGAATGGGTGGGGAATTTTATTTCTGCTATGACGACTCCCCGTACAAGAGCTACGAGGACTTCAACATGCAGTTCTTGTCGGCCTTCAACTTTCGATCGTTGCATGTGCCGGTGTGGGTGCTGTGGTTCATAGCATGGATGAACGACCTGATACGCTGGCTCCTGAAGCCCTTCTACAACTACACCCCACTTCTCAACGGTTACACACTCGCTGTGGCCTGCACGTCCTTCACTGTCTGCACAGACAAGGCTTTTCGTCACTTTCAGTACAGGCCGCTGTACAGCTGGGAGGACTGCTTGGCCCGCACACAGAGCTGGGTCAACACGTTCCCTTTAGAAGCTCACACTAAAAACACCTAACAGCTGCTTTAGTCTCAGGAGGACAGTTTTCACAAACACGTCTGGTTCCAAAAATGAAAGATGAGATTTTGTGACTGTGTGTCACGGCTTCTCACCTGATGATGAACATTTGGACGTGGTATTCTGTATGTGCACACGTACTCAGAGCACATCTTAATAATATAATCAGCATATCATAATACAAGCACTTTTATACAGATGTACAAGTGATGCTATTTTGATAGTAATCAGGTTGTTCTGATCtcactttattaaatgttatgcaATCCAAGatgtcaaaacatttcataacatAGCTGTTAAACTAGACAATTAAGTGCTAGTGAGCACAagcataaattaattattaaagtatttaattgtttatttgaagcattgctgttctgtttttttattaaaagaatggCAAATTTAACTATTGTATTAAGTATTAagcttttttaaagtttgttctGATATAGTGCAAGGACATGTTTAGCTTTCAGATCTTCTTTCTGCATACCACTAGTTAAATGCAGAATTGGACAGTTTACACAACTACATTACTTGAGTGAAAGTACAGCTACTGCTGGTCTAATAATACTCATTTATGTTGTCAAGGCAGAATTTTTACTTAAGTACAACAGTACTTGCTTGTAAAAGTACATGAGTAAGCTTCCTATTTTATGTACCCACATCCCTACAAAAGCAGCATGGTGCAAATCTTGTATAGCCATTCATCCACATTTGAACCAAGTGGACAGTGAGATTGAACCTGCTTTAAAACCCTGCAACACAACTGTCgctttaacaaaaaacaaacaagagaggaaaaaaacccaacaagAATTAATTGgcttaaaaaaatctcaaaaataaatTTCTAATCGCTTTGGTGGTATGATAATGTGATACACAGAAAGTGTACTGTCCAGTATGGTTTCAAgacaaacactgttttattaGGAGAAGCATAACAGTGAAACGGGAAAACTAATTTATgtcaatgcaataaaataattgtgattaa

Function

symbol description
hsd3b7 Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to act upstream of or within steroid biosynthetic process. Is expressed in several structures, including adenohypophysis; digestive system; lens; macrophage; and solid lens vesicle. Human ortholog(s) of this gene implicated in congenital bile acid synthesis defect 1 and intrahepatic cholestasis. Orthologous to human HSD3B7 (hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7).

NR:

description
3 beta-hydroxysteroid dehydrogenase type 7-like

GO:

id name namespace
GO:0006694 steroid biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016853 isomerase activity molecular_function
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity molecular_function

KEGG:

id description
K12408 HSD3B7; cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234932.1 True 2228 mRNA 0.42 7 12216611 12230379

Neighbor

gene id symbol gene type direction distance location
setd1a LOC107729457,LOC107658500,LOC107737760,LOC107582993,LOC107554121 coding upstream 921 12193978 ~ 12215690 (+)
fus fus,LOC107658502,LOC107554122,LOC103040960 coding upstream 24468 12183251 ~ 12192143 (+)
si:dkey-16l2.17 si:dkey-16l2.17,LOC107582999,LOC107729501,LOC107658439,LOC107737763,LOC107689709,LOC107554090 coding upstream 34113 12179223 ~ 12182498 (+)
kat8 kat8,LOC107582998,LOC107658503,LOC107729500,LOC107689650,LOC107554120 coding upstream 38882 12174276 ~ 12177729 (+)
rnf25 rnf25,LOC107729499,LOC107658504,LOC107582997,LOC107689710,LOC107554089 coding upstream 42737 12168881 ~ 12173874 (+)
cd2bp2 cd2bp2,LOC107582988,LOC107729467,LOC107554127,LOC107737770,LOC107683307 coding downstream 23479 12253858 ~ 12259180 (+)
prr14 LOC107729463,LOC107658509,LOC107582987 coding downstream 29097 12259476 ~ 12268093 (+)
rusf1 zgc:162613,LOC107729465,LOC107658510,LOC107737752,LOC107554129,LOC107689643 coding downstream 42261 12272640 ~ 12276359 (+)
hspb9 LOC107758484,LOC107583100,LOC107695165,LOC107689635,LOC107554137,LOC107737748 coding downstream 225630 12456009 ~ 12456909 (+)
pyya pyya,LOC107689636,LOC107554138,LOC107583099,LOC107758485,LOC107695175 coding downstream 243690 12474069 ~ 12477272 (+)
G19274 NA non-coding upstream 81654 12132629 ~ 12134957 (+)
G19263 NA non-coding upstream 97836 12118538 ~ 12118775 (+)
G19257 NA non-coding upstream 142108 12074231 ~ 12074503 (+)
G19255 NA non-coding upstream 143538 12072719 ~ 12073073 (+)
G19208 NA non-coding upstream 242605 11967648 ~ 11974006 (+)
G19579 NA non-coding downstream 450879 12681258 ~ 12681565 (+)
G19575 LOC107690704 non-coding downstream 452439 12682818 ~ 12686371 (+)
G19656 NA non-coding downstream 766838 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 775431 13005810 ~ 13096854 (+)
G19627 NA non-coding downstream 829781 13060160 ~ 13061606 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 98672 12114048 ~ 12117939 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other upstream 115759 12092603 ~ 12100852 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other upstream 167189 12027149 ~ 12049422 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other upstream 322955 11885655 ~ 11893656 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 382687 11773200 ~ 11833924 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 2048 12232427 ~ 12249997 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other downstream 72985 12303364 ~ 12315046 (+)
G19326 NA other downstream 281547 12511926 ~ 12513721 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other downstream 289458 12519837 ~ 12528803 (+)
LOC122332158 LOC107583070,LOC107737766 other downstream 605002 12835381 ~ 12987913 (+)

Expression


Co-expression Network