tnfsf14 (LOC107744984,LOC107661863,LOC107711150,LOC107602699)


Basic Information

Item Value
gene id tnfsf14
gene name LOC107744984,LOC107661863,LOC107711150,LOC107602699
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6841019 ~ 6846641 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234966.1
taactttgttaTAGGGGAAAACATAAATGCAGTGTAACCATGAGAGAACCAGTCATTTGGAACGTTTTTCTGAAGACTGTATAGTGTTCAATATATCTACCAACTAAccaatttataaataatatttcaaggAGTGTCATCCATGTGTGCCCTCTAAAACTTTCATCTAAACcgagcatttttatgtttaggcTCAGGCCATTAtctatgcaattaaaatgaaatatcagACCATAAATATAGGAGCCTGACAAAAATGCTCATCTtagaagaaacttttaaacagcaCTTTTGCATCTGAATTCTTCAAATGTTATTGCAATTGTTGTTTAGTTTCATCTAACCTGATCAACAGTCACCCCAGAAACTAATTTGGATGATTATACTATTTCTGATACCATAGGCTATGCTTGCTTGGCTTTGTAGTTGgcttatgtattttttttcgcCACGCTTTTTTCCCCAGACTTTTGTTCgactttgaaacaaaatgaagatATTTGTAATATTCTCTGGTAACGTTTGTCCATCCTTTGAAAGGCAACACGCCCAAAATTTTTCTGAAGCATGACTACATTCAGTTTCACAGTCTTGTGAATAGGGTCTATGGAGGACAGAAATGTCTAGACTTCGGCGCTGGTCCATCGAGCTGTTTGTCATGTTCATGGATTTCCTTTTTGGTTCGGTTTAGTTTGGTTCAGAAAGTAAAGGACGGGTTCGGAAAGAGTCGGTTCGGACTGGACAGGACaggaaaagaaattaaaaggaAAGGACGTGTGGCCAAGTATAGTATATGCCATACCTAGAAtttttgctttgcatttcaTCACACAGTAGTGAGTagttaataaacacacacacacacacacacacacacacacacacacacacacacacaccccagaGCAATGAGCAGCCAGTTGGAGCTTGGGTGCATTGCTTCTCCACCTTCTCCACCTATGGCTGAGGCTTCTGGTTCAATAGCCGCTATCTGTGAAGAATAACAGTAAAGGGTAAAACTGCACTACTAAcaagtgtgttcataattaagttaatgcattaaaataatccaatttttaatatcaagcagcaaagcAAAAATAGCTGGACGCGGATGAGACTGGAAGCTGGAGccatagaatttacaaatggaCAGACTCATTTTTACATCAAGAAAAAGCTGTATAGATCTCACCTTAGTCTTGGTATTGAGGGTGGAAGAGAGAGCCGGCCATTCACGACAATTCCTGCCAATATTGAGACGCAAACCTGCAACAATTAAATTGCAGATCTCACTCTCTAACCGTTACGCCACAAATAGTACGATAGTCTGAAGATGCCAAAAAGTGTGTACGAACCAATAGTTATAGGTCTAAAGCGACTAAGcaagtaaacaaatataatgattttaatgttgcagctttaataaaaacatttgtaataaagaaactgaaaaacGATTTGAAATGGTAAcgaaacaattatttttatggtttgtATAGCCgcagtctctttctctctttgaaTGATAAGTACAGACTACTGCCCCCTTTAGGTATGGAGAGTTATTTCCTCTCACGCAGATGCAGAACGTACATTCTAGCTGACCTTTGCATGCAGTCTTTGACATGTGttcaagtgcattttttttttttttacccagatGCAGGTGACAACACAGTCAGCGTTCTTCACCTCTAGCTCTTTGATTTCTGTTTCATGTGTCACGAGCTAAGGCATGAAGTGAAAAGTACACAAGGACTGAATGAGTATTCTAAATGCGAcatagctctctctctctctctctctctctctcagtctgcttgcatttttatttttctcagctcAGCTATGCTTGTGGTTATTGTTCTAAATAgaaggatgaaaaagaaaaaggctaCATCAAGCCTGCACATAAGCACTACCCCAGTGAACTTTCTTTTTCCTACGGTTACTTATGTTACTTGTTATTTCATTACAGCTCAAACTGCTTGAagaagtgtgtgagtgtgtgtagagTAGGGGAAGCTGTGGCTAAGAGCTCGTGCACAGGAGAGGAAGGTGTGAACTCGTAGGCCTGATGCATTGCCgtgaatatgcatttttagacaCGTGTATGCTTGTGTGGGCATTTGTGCGTTATGTATTCCCATTTATATAGATTGCACTTCCAGCCTACTCAAATGGAATTTCCTGTCACTTAGAAATAATACtactttaaagatttaaagaggGGTCTGactcttcgtttttttttctctttcggCCCCACTGGAGTGCATGTTCTCACTTCGTCCGCCCACCTGCAGGCTTTATGAGTGATGGTTATCTTTCACTCTCGCTGTGGGTCTCTCGCCGCGTTGCAGTGGGTCTTCTCGCACCTTGTCATCTCTGAAGTGGCCAGAGACGGTGAGCACGCACATGGCTCCGGGTAAAGTTTTGTATCCTTCGGTATTCACGGTGGACAGCAAAATGGGGCCCCCTCCGCTGCCCCTCAAGCCGGGCCGTAGACAGCGGAGGGATGTGATCCAGACTCTGCTGGTGATTCTGGTGTGTGTGGCTCTTTGTGGCATGGCCGTGGAGGCCTGTTTCATCTACCATCTGTTCACATCAAAAGAAAACTCTACACCTCCAGATGAACCACTGACTGGCATGAGAAAACAAGAGAAAGAACATGCTGCCCCCCCCAAACAAAAGCCGCATGGAGAAATGAAGCCACCAAAACCAATGGCACATCTGACAACTGGTATGAAACCTGTTAACGGAGTCGTGCTGTGGCATGAAAatcataatttctttctttaccAAGTCAAACACAAGGCAAACGAGGGCAAACTCATCATAGAGAAAGAAGGATATTACTCTGTCTACTCTAAGATCAACTTCGAGGTGGACAGCATCTTGATCAGCCACTCTGTGCTCAGGGTAACGCACAGATTTTTAGGAAACGAGATTCCGCTTCTCCAGTCCACTAGGCTACGTCTGAAATTGACAACCATAGACAGCAGCTACCTAAGTGGGGTGTTTCATCTGTACAAAGGCGATGCTGTCTTTGTCATGGTGAAAAACGGTACGCTTGTGCTGTCCAACAGTGCGGAGAACTACTTTGGTCTGTTCATGGTTTAGACGGACTGTTACCGTACGACTAATGCGCGATTTGGATAAGTTTACAGACTATGACTATACTTGGTTTTCCTTTAAAACTGTACGTTTCTTCTGTAAACGTCTGTTTACTTCTGTAAACTAGCATGTAATGTATGCCTCTATCTGTGTGTAGCACCTGCAGCTCTTTTGATCTAAACCGTAAAAATCAACCAAAGTATCaaaccaaaataacattttcacgtttaattcagtgttgtacttgttttttctttgtgagttatttgtgaaatttacttaCTATATATCCtatatactatacatttttgttta

Function

NR:

description
PREDICTED: tumor necrosis factor ligand superfamily member 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234966.1 True 3435 mRNA 0.41 4 6841019 6846641

Neighbor

gene id symbol gene type direction distance location
dnm2a dnm2a,LOC107661823,LOC107602725 coding upstream 7795 6796786 ~ 6833224 (+)
trim35-12 LOC107670464,LOC107602713,LOC107599344,LOC107728678,LOC107711176,LOC107661834 coding upstream 156821 6679181 ~ 6684198 (+)
gipc1 gipc1,LOC107670535,LOC107728688,LOC107599306,LOC107661840,LOC107602717,LOC107711205 coding upstream 162302 6670199 ~ 6678717 (+)
dnajb1a dnajb1a,LOC107711204,LOC107602716,LOC107670512,LOC107728686,LOC107599305,LOC108429690,LOC108257372 coding upstream 171010 6665977 ~ 6670009 (+)
samd1a samd1a,LOC107728687,LOC107711202,LOC107661838,LOC107599303,LOC107670528,LOC107602714 coding upstream 184403 6649673 ~ 6656616 (+)
ppap2d ppap2d,LOC107661820,LOC107711217,LOC107602726,LOC107744960,LOC107670514,LOC107599313 coding downstream 15768 6862409 ~ 6888805 (+)
si:ch211-207b24.4 NA coding downstream 302281 7148922 ~ 7157297 (+)
LOC122329403 fn3krp,LOC107670452,LOC104918611,LOC107599346,LOC107744985 coding downstream 314113 7160754 ~ 7164555 (+)
tbcd tbcd coding downstream 319893 7166534 ~ 7197688 (+)
metrnla metrnl,LOC107672492,LOC107711221,LOC107587969,LOC107744963,LOC107670526,LOC107599318 coding downstream 395056 7241697 ~ 7251923 (+)
G17663 NA non-coding upstream 135614 6705195 ~ 6705405 (+)
G17662 NA non-coding upstream 136317 6704414 ~ 6704702 (+)
G17630 NA non-coding upstream 215723 6623688 ~ 6625296 (+)
G17584 NA non-coding upstream 365400 6475099 ~ 6475619 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding upstream 404051 6436732 ~ 6436968 (+)
G17683 NA non-coding downstream 297 6846938 ~ 6847606 (+)
G17699 NA non-coding downstream 56105 6902746 ~ 6903161 (+)
G17704 NA non-coding downstream 75555 6922196 ~ 6976265 (+)
G17791 NA non-coding downstream 348141 7194782 ~ 7266722 (+)
G17806 NA non-coding downstream 418702 7265343 ~ 7282946 (+)
G17590 NA other upstream 284269 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 645981 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 737393 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 878131 5957403 ~ 5962888 (+)
G17302 NA other upstream 1242787 5597099 ~ 5598232 (+)
LOC122331592 LOC107744988 other downstream 736713 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 809390 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 961602 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 992315 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 1103120 7949761 ~ 7950417 (+)

Expression


Co-expression Network