dusp3b (dusp3b,LOC107753093,LOC107688089,LOC107590411,LOC107709997)


Basic Information

Item Value
gene id dusp3b
gene name dusp3b,LOC107753093,LOC107688089,LOC107590411,LOC107709997
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13391973 ~ 13394963 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235109.1
GTGGTTTGAAGCACACAAAGACGGTACGGGCTGCAGTTAACTCTCTAGGCCTAACTAACTAAAACAGCTCACAGATGAATGCGAACCGCTCTAGAATTATTTAAGTTGAACACTGACCAGTGGACTAAAATCGCTGGACCATTATTCGGTACTCTAAAAGAGGACTCGATGAAGATGGAACCGGATTATTGAAAATCCCATCAGAACCGAGGCCCGGGGGAAAGGTATTTTCTACTTGAAAGGCAATTTATCTTGAACCGAACATGACAGACTATGAAGTGTCTGTTCAGCAGCTCAACGATCTGTTGACAGATGAAAACGGTGACTTCTGTATGCCctccaaacattttaatgaagtcTGCTCTGGGATACTCCTAGGAAATGAGTCTGTAGCTACAAATGTAACGCGTTTGCATCAGCTGGGAGTGACACACGTCCTCAACGCTGCAGAAGGCCGGTCGGACATGCATGTGAACACGGACGCGGAGTACTATGCAGACACAGGGATCATCTATCACGGGATACCAGCCTTTGACACCGACCACTTTGACCTCAGTGTATATTTTGAAGAAGCTTCCAATTTCATTGAAAGAGCTTTGGCTATGCAAGGTCTGAAGGGCCTtcttaaaaGCAGGGTGTATGTACACTGTCAGAAAGGCTACAGTCGTTCTGCTGCGCTGGTCGTCGCACACCTGATGCTTCAGCACGAGATGGACGTACGAGCCGCTGTGGCCACAGTGAGAGAGAAACGGGAGATCGGGCCCAACGACGGATTCCTGCGCCAGCTCTGCTGTCTGAACGACAGGCTGGCAACCGAAGGAAGGCTGTGTGTTCATCAGacctaaatatatatgcattttaagcGTTTTTATTATCTAAATGTTAGCGTTTCTCTTTAGTATCTTCTGCCCTCTAGCGGTATTGATAAACGTAGTTTATCCAGCACAAAGTGtcaaaggaaaagttcaccccaaaattatttACTAACCCACATATGTatacttgtctttttttatgttgaacttaaaaagaagatattttgactgCGGAAGTCAATCATTGATTCGACCATTTGTTTGATtgccagcattcttcaaaatatcttttattgtgTTCAGCATCAGAAAGAAGCTCATTCAAGGTTGGCACGGGGCGAGTAAATGAggacaatataaaaaattttatgcgtactatttctttaaaaccatATGCCCTTCTCTAGCTCTCTATATACACATAAGCATAGCTGCTCGGACACATAGGCTATAAATTCCTGGTATTTTTTGCTATAAAGTCTTTTACCCTTTTTGTGTAGCCAGTGATAATTACAGCTTTCTCCCAAATAATCAAACACAAGACGTCTTCACAACAGACaacaatcatttattaaacatctTTAAAGTGAAAA
>XM_043235110.1
GTGGTTTGAAGCACACAAAGACGGTACGGGCTGCAGTTAACTCTCTAGGCCTAACTAACTAAAACAGCTCACAGATGAATGCGAACCGCTCTAGAATTATTTAAGTTGAACACTGACCAGTGGACTAAAATCGCTGGACCATTATTCGGTACTCTAAAAGAGGACTCGATGAAGATGGAACCGGATTATTGAAAATCCCATCAGAACCGAGGCCCGGGGGAAAGGTATTTTCTACTTGAAAGGCAATTTATCTTGAACCGAACATGACAGACTATGAAGTGTCTGTTCAGCAGCTCAACGATCTGTTGACAGATGAAAACGGTGACTTCTGTATGCCctccaaacattttaatgaagtcTGCTCTGGGATACTCCTAGGAAATGAGTCTGTAGCTACAAATGTAACGCGTTTGCATCAGCTGGGAGTGACACACGTCCTCAACGCTGCAGAAGGCCGGTCGGACATGCATGTGAACACGGACGCGGAGTACTATGCAGACACAGGGATCATCTATCACGGGATACCAGCCTTTGACACCGACCACTTTGACCTCAGTGTATATTTTGAAGAAGCTTCCAATTTCATTGAAAGAGCTTTGGCTATGCAAGGCAGGGTGTATGTACACTGTCAGAAAGGCTACAGTCGTTCTGCTGCGCTGGTCGTCGCACACCTGATGCTTCAGCACGAGATGGACGTACGAGCCGCTGTGGCCACAGTGAGAGAGAAACGGGAGATCGGGCCCAACGACGGATTCCTGCGCCAGCTCTGCTGTCTGAACGACAGGCTGGCAACCGAAGGAAGGCTGTGTGTTCATCAGacctaaatatatatgcattttaagcGTTTTTATTATCTAAATGTTAGCGTTTCTCTTTAGTATCTTCTGCCCTCTAGCGGTATTGATAAACGTAGTTTATCCAGCACAAAGTGtcaaaggaaaagttcaccccaaaattatttACTAACCCACATATGTatacttgtctttttttatgttgaacttaaaaagaagatattttgactgCGGAAGTCAATCATTGATTCGACCATTTGTTTGATtgccagcattcttcaaaatatcttttattgtgTTCAGCATCAGAAAGAAGCTCATTCAAGGTTGGCACGGGGCGAGTAAATGAggacaatataaaaaattttatgcgtactatttctttaaaaccatATGCCCTTCTCTAGCTCTCTATATACACATAAGCATAGCTGCTCGGACACATAGGCTATAAATTCCTGGTATTTTTTGCTATAAAGTCTTTTACCCTTTTTGTGTAGCCAGTGATAATTACAGCTTTCTCCCAAATAATCAAACACAAGACGTCTTCACAACAGACaacaatcatttattaaacatctTTAAAGTGAAAA

Function

symbol description
dusp3b Predicted to enable protein tyrosine phosphatase activity and protein tyrosine/serine/threonine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in cytoplasm. Orthologous to human DUSP3 (dual specificity phosphatase 3).

NR:

description
PREDICTED: dual specificity protein phosphatase 3-like

GO:

id name namespace
GO:0050860 negative regulation of T cell receptor signaling pathway biological_process
GO:0050868 negative regulation of T cell activation biological_process
GO:0046329 negative regulation of JNK cascade biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0070373 negative regulation of ERK1 and ERK2 cascade biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0045931 positive regulation of mitotic cell cycle biological_process
GO:0005829 cytosol cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0033549 MAP kinase phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235109.1 True 1408 mRNA 0.42 3 13391973 13394963
XM_043235110.1 False 1387 mRNA 0.42 3 13391973 13394963

Neighbor

gene id symbol gene type direction distance location
dlx4a dlx4a,LOC107709990,LOC107689696,LOC107590410,LOC107753083,LOC107688148 coding upstream 467 13386428 ~ 13391506 (+)
znf207a znf207a,LOC107590415,LOC107698690,LOC107601239,LOC107689623 coding upstream 221719 13163996 ~ 13170254 (+)
slc25a23b slc25a23b,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC107753149,LOC105898533,LOC108444036 coding upstream 229666 13154507 ~ 13162307 (+)
timm29 zgc:110046,LOC107736790,LOC107601237,LOC107698646,LOC107753167,LOC107689699,LOC107578239 coding upstream 255223 13134670 ~ 13136750 (+)
carm1 carm1,LOC107698604,LOC107689626,LOC107753277,LOC107724424 coding upstream 262365 13116031 ~ 13129608 (+)
cdk5r1a cdk5r1a,LOC107709992,LOC107689695,LOC107601231,LOC107688088,LOC107753032,LOC108442536 coding downstream 67089 13462052 ~ 13468151 (+)
itga3a LOC107601250,LOC107689616,LOC107688090,LOC107709989 coding downstream 78545 13473508 ~ 13501419 (+)
ca10b ca10b,LOC107753024,LOC107601251,LOC107710000,LOC107689615,LOC107590442,LOC105907875,LOC108442538 coding downstream 106641 13501604 ~ 13520389 (+)
smarce1 LOC107590406,LOC107752998,LOC107601252,LOC107709999,LOC107689614 coding downstream 126252 13521215 ~ 13528518 (+)
prkcbb prkcbb,LOC107601253,LOC107689613,LOC107710001,LOC107590404,LOC107752983,LOC107688094 coding downstream 137607 13532570 ~ 13633527 (+)
G19780 NA non-coding upstream 28243 13362886 ~ 13363730 (+)
G19777 NA non-coding upstream 31638 13359319 ~ 13360335 (+)
G19776 NA non-coding upstream 32928 13358501 ~ 13359045 (+)
G19775 NA non-coding upstream 33565 13357713 ~ 13358408 (+)
G19756 NA non-coding upstream 34922 13356216 ~ 13357051 (+)
LOC122341620 NA non-coding downstream 13357 13408320 ~ 13411918 (+)
G19788 nsfa,LOC107689618,LOC107709994,LOC107601245 non-coding downstream 14776 13409739 ~ 13443578 (+)
G19798 NA non-coding downstream 46723 13441686 ~ 13442149 (+)
G19890 NA non-coding downstream 392870 13787833 ~ 13792555 (+)
G19891 NA non-coding downstream 420390 13815353 ~ 13818222 (+)
si:dkey-204f11.64 LOC105898698 other upstream 277117 13112477 ~ 13114856 (+)
LOC122332158 LOC107583070,LOC107737766 other upstream 404060 12835381 ~ 12987913 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other upstream 863170 12519837 ~ 12528803 (+)
G19326 NA other upstream 878252 12511926 ~ 12513721 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other upstream 1076927 12303364 ~ 12315046 (+)
rbbp6 rbbp6,LOC107689611,LOC107710004,LOC107590402,LOC107601255,LOC107688097,LOC107720072 other downstream 303574 13698537 ~ 13710865 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other downstream 600998 13995961 ~ 14002378 (+)
G19973 NA other downstream 654527 14049490 ~ 14053032 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other downstream 723504 14118467 ~ 14119570 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other downstream 725222 14120185 ~ 14123128 (+)

Expression


Co-expression Network