mslna (LOC107703339,LOC107727132)


Basic Information

Item Value
gene id mslna
gene name LOC107703339,LOC107727132
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17048915 ~ 17060502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235127.1
AAACCTGGAAGCTTTTCTTCATCAAAACCAGCACAAACCTTGATGATGCACTGCTGAAATTTTCCAACAAGACTCCCAGTGTCAGCAATGTGTCTCTGTCCGATGTGCTGGATGTGATCGATGACATCCGGATCAGTCGCTTTAGTCCCCAGAGACTGAAGGATCCTGTCTTCATCCAGTCATGGTTCCAGGGACGACTGAACCCCTTCTTACCATCCATCTCTCAAAGACTCCTGTCCTGCCTCGGCACCAGAAACTTCACCTGTGAAAGTTACCGCACTATTTACTCAgatctaaataataattttggacTGATGAACAGTGCAACACAGAGATTTGTCCTCAGTGACTTTATTCGTCCATTCCTGTCACAACGTCAAAACACAGgTATCGATTGCACATTGCCATTTAACAACAGCGTGGACTTCATCCTGCAAAACTTCGGCAGTTTCTCTCCGTTGGCACGGCTTCAAGATTTCTCCAGTTTCAGCCGCAATTTTTCAGCTGTGGATGCTGTTTCTGTTCTCACAATGAGACAGCTGGAGGAACTGGTGTTCAGTCCTCCTGCTAAACCAGAAGACAGAGGAAACATCCTCACAAAAGTCTTTGACTTCCTTCTTAAAGACTCCAACAGAGACAAACTAAACAACTTCCTGCCCTCTCTTCAGGCACAGGCCAGAAAGGCAAACTTCAACTGTAGTGACTACAAAGTCATTTTTGACAGGATGGATCAGACATTATCGTCAGTCGCTCCTAACCAGTCTGAAGCCCTGCTGACGATCAGAGACTCTGTGATGATGATTCCTCCTGACGAGTGCATTGAGAGAACGATCCAATGCACAACAACTCCTGTAAATGAGTCTGTCCTCTGTGCGAGTGTCAACAGCTCTGCCGTGGATCAGTTCTTGAACGGACTGACTCCAAACACACCAGGACTTTGTAACTTCACTGTGGTGCAGTTTGCCTGTCTACCAACGCTCTCACAGTTAAACTCTCAACAAGTGGCTGACCTGCTGGCTTGCAAACTGTCCAGCAATGTGACAAAAGAAACCTGGAAGCTTTTCTTCATCAAAACCAGCACAAACCTTGATGATGCACTGCTGAAATTTTCCAACAAGACTCCCAGTGTCAGCAATGTGTCTCTGTCCGATGTGCTGGATGTGATCGATGACATCCGGATCAGTCGCTTTAGTCCCCAGAGACTGAAGGATCCTGTCTTCATCCAGTCATGGTTCCAGGGACGACTGAACCCCTTCTTACCATCCATCTCTCAAAGACTCCTGTCCTGCCTCGGCACCAGAAACTTCACCTGTGAAAGTTACCGCACTATAATTACGACTTTTGTGAATGCACTTTTACGAGATAGACAAGACACTTGCAATCCACTGCCACCCaatggcactaaaacacagagTGATCTTATCTACACAGACTTCATGAAAGTCTTCCTCTCTCGCAGAGACACTAACGATCCCGGGTGCCTTACTGACACAGCTGGCATTATACAATGGGTCAACAAAAACTTTGGGCCATTCATTCAGTCAGCTCCCCTAAAGGACCTTGAGCAACTGAACAGAAACTTTACAGCGGTGGATGCTCTACCTCTCCTGGGTCTAAGACAACTATTTGAGTTTTCTGTAACTCCTGGCGCACTAATTAATTCTGAAGATGTCACCAATGTCATGAAGTATGTTAAGGATTGCCAGCTTCCTGCTTTCTTTGACCTCTACTCCCCAAAAGTTCAGGAGATCAAGCCCCCACAAGATGTAAAAACAGCACTGATTAAACAGGTATTTGACAGAGTCAGTCTGTCTACTCTAAGCATCACTAATCAGGAAGCAATTGTCTGGATCCAGAGCAGACTAAAACCTCTGTTAGACAGCTTTTCAGAAAGCTTTGTGTCTCCATTATTCACCATCCTCAACACAAGGGACTGCAATATAGCTCAAACTGCCTTGGGGCTATTAGATGCTGTTCGAGCTACACTACCCATAAACACCAAAAATGCAATCTACAATAACATTCTTCAATCCATCAAAGGGCCACAGCCTCTGAGGTGCTACCGAAATAACAGCTTTATTGCATTTGTGAATGAAAGCCTGTACGGATTTGGGCCGTTTCCAAATGTGAATTCCTTCCTCTCTCTGATACCGCCAACTCGGAAATCTGAGCTTGTAAACTCTATAGCTCCTTCTGAGCTGGGAAACTACTTGAGGCAGGCGGACGTGGTGAACAGCGATTCACAAATCTGTGCCATCTTCAACAACTTTGCCAAAACCCCTGAGTTCTTGGAAACCCAAGACGTTCCAGATAATGTTAAAAGCGCCACCCTTCCCTGTGTCTGGCCTATGGCGTTGAGAAGCGACAACGAGACAGAGGCTGATTTGTGGTTTAACCGTAGACTGAAGCCCTACTTGAAGTTCctaaacaaaaatctaataGGGTCACAAGAGACACTGAACTCATCTTGCCAATCATACAAGAAAATggtcgGTGTTTTAGGCAATGGTTTCACCTTTACTGGCTCTCAGATTACAGATCTGGATGTGTACAACACCATCAAGACATATCTAAAAACAGacactGACGCAAAATGCTACAACCCATTTGACCCAAGTCTGAATTCAACTGCATGGTTTGTCAACAACATTGGCGCATTTATAACTTTCTTGACTCTGGATGATCTCTACTCTTTCGGCCCTGAGAGCACGATGCAAACATTCGCTGTGAACCCCGATAACATAAAGCTGTTCAATCAAGTATCACTTCCGAAAAACGTCTTCAGTCGCTACACTGAACTCATCTTTCTAAAAAACCCAAGCTTTAATCTTTTTGATTTGCCTTCAAATTTGCAGTGCGATGCCCCAGTATTGGTCTTCACTAAATTGACTGAAGGTCAAACTAATACTATTCTTGCAAACTTCAAGACATCTTGCACTGATGTGGATCCTGCGATATCTACTGCCCTGACGGCAAACATCAAGACCATTGATGCTAGTGCTATTACCAGCTTGGGAAGCCAGATTGTTGGGCTAACAACTGCACAATTAAACGCAGCACCTCCTTCGGTTCTTATCAATAGTCTCGCAACACTGGGCAGTACGTCTGGATGGTCCCTCGGACAAGCCAAGTCAATCATAGCAGTGCTTTTCAGTGGAGATTTTAAGATCGACTCTCCCAGCAAGTTGGTGAGTCTAGGATCACTGATTGGTGGGATTCCGTCAACAGTACTCACAGTCATTTCACCGGATCAGATTCttcaaacaacacaaaacacacaattcaTACAAAACATAGTTGCTGCCCCAGAGATTGTACAAAAGGTCTTTGTGAACCAGATAATCAAAGTGGGATCTACAGTATCTAACTTAATGAAGAACATTCCCAGTGACTTGGCCGTTCAAATTCCAAGAACGTTCCTGGAGATAACTAGTGTAGAGACAAGCGTTCTGCAAGAGTTTAACACAAAAAAGTGGAAACCTGAACAGGCAGTTCTTTTCTTTGATTCTGTGGCAAATGTTTTTGATCAACCCGATGACCTTTCAGTGGAAATTTTGCAAGGATTTACTTGCTCTCGAGTGCAGACATTTACCGTAACCAAAATCAAAGGCCTGATCAAAGCCTGCCGACCGAGACTGGGCAGAACTAAGGTGGTACTGAGCGAGACTCAGctGACTTGCATGTACAACCTTGTTAGGAAGGAATCACCATTCGATTTTGAAAACTATCCTTCAGATATGTTGCTATACTTCAATTATGCAACGATCAACAAAACCCTCTGCAAAGCATATTTTACCCAAGTCGGAGCAGCAGATCTCTCAATCTTTTCAAGCACTCTGAGCGGAAGAAGGGACATTTTGTTGAATAATGCTATAGATTGCTTGGGCATTAATGGGACAAGCATCAAGAAACAGGATCTGACAGTGCTCGGCAACTTGGTATGTGCTGTGAGTGGGGATGTCATCAAAAACTCAGACCCAGAAATCCTTGAAAACTTAAAGAACTGCAAATACCTGTCCGATTCGCAAATATCAGCCATGCAAGAACTTCTAATGAAGGGAACTTCACAATATGGACAAACAAGCAAGTGGAATCAGAAAACACTGAATGACCTGGAATTTCTTCCATTGTACTTCTCACAAAGTTTTTGGGGCTCATTCACAAAGAGCGATGTAGGCAAGTTCTTGAAAACCTTCTTAAAGTCTTTGAGGGAACTAAAAACACCGAAGGCACAAATGAAAAAGCTGTTTACAGCAATCTTTTTATCTACATACAGAACCAAGAGGACAGTGACTTGTGACAGTGGGTACATCACTAGTGTTACCATCAGCGATGAGGCCTTTCCCTTTGGATATAATGCGGATCAGTTCCGCTACTGTCTGAATGCAACCGTAGTGAGGGACAACCTCGCTAGCCTGTGTCAAAAGATCGAGGATAGCACCTATCAGAGAACCATTTTGGACAAACTCAAAGAGATACAGCCGAGTGGGCTTTCAGATGATCAGGTCCAGGTGCTGAAGTCCGTGTCCAGGAGCGCTACAGTGGATGAAATCAGTAAATGGAACATCACTAAATCTGACACCCTGGCAGCGCTCATGGACGCCAATGATGGCGACTGGCCCTCTGCACAGAGCGAACTAATCATTACCAGATACCTAAGCGCCAACAACAGTCTGGGCTCCACTGAGCTCAATCTCGTGAAAGGACCAAACCTCTGCTCTCTGAATGCCAGCGTGTTATCAACAATATTGCCTGCCAGTATGCGGGAGTCTGATGCTTTGGATGTGACAAAATGTTCaactgagaaaaagaaagcactCTTCACCGTCGCTAACAAAGCATTTCCTATATCAGCCACAAGTAGTAAAAGTGTCATCCTGTCAGCCTTCCAGCTCATCGAAACCTATCTGGGAGGTGCAGATCTAATCTACATTAAGAATCTGTCATCATATAATGTGAGCATGAGCATGTCCACTTTCATAAATCTGGATCCAAGCGTGATCTCGAGCCTCACCATATCAGATGTAGTGGGTCTTCTTGGAAGCAATTTGCAGGatctgaaaacatttgaaaaccaaACCGTCGTGTCGACCTGGATCTCACTGCAGTTACAGTCAGAGCTGGATAAACTCAATCTCAATCTGAAGGGAGGCAAAGCAACAGCTGACACAACGGTTGCTACAACGGTTGCTACCACCGTAGCGACAACTATAGCTACGACTGTTACCACGGTCAAAACCACTGCAGGCGCTCcaggAACCGCAGCCCATGGATGGACGGTTTCCTTCAGCATTCTTGTGCTCATTTTAACCATGAAAATGGAGATTATATAGCAGCGCTGAGATGATATTCTGCAGTTGAAGGAATATAAACATACAGAATATTACAATCTGATCAATcacattttctgtcattctatTCATGTTTTTCCCGACAAATTAATTCACACATGGAAAAAGAAGAACTTTTGCACTACTAGTCAAAGCAAAGGATATGTAGCATTTGATTTAAATACTTGTACAATTGTCTCAAACAATAAAGAGTCTATATTTAAGTGTTTCAGACATCTAGAATTGTTATAAATTTCCTGGCCTTTTCTTGAATATGGCAAAAAGTAAGTGTTCAATGACTTGTACCCGTTTATTTGTGACAATGATCATAACTAATAATGTCAAATGTAGTCATACACGTTAATAAAAAGGTACTCTATGATGAACAAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107703339

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235127.1 True 5721 mRNA 0.44 42 17048915 17060502

Neighbor

gene id symbol gene type direction distance location
rmi2 rmi2,LOC107674720,LOC107703341 coding downstream 1434 17045100 ~ 17047481 (-)
pla2g10 zgc:92162,LOC107727130,LOC107703381,LOC107745603,LOC107674667,LOC107564700,LOC107568924 coding downstream 24920 17020424 ~ 17023995 (-)
axin1 axin1,LOC107727128,LOC107703383,LOC107745589,LOC107674664 coding downstream 50135 16957962 ~ 16998780 (-)
elfn1a elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding downstream 419759 16542348 ~ 16629156 (-)
LOC122341848 LOC101886504,LOC101886427 coding downstream 597872 16449554 ~ 16451043 (-)
ubfd1 ubfd1,LOC107564687,LOC107745602,LOC107674700,LOC107703338,LOC107727120 coding upstream 22777 17083279 ~ 17089129 (-)
LOC122341808 LOC107727118 coding upstream 44886 17105388 ~ 17109815 (-)
kdm8 kdm8,LOC107727121,LOC107564696,LOC107745601 coding upstream 55976 17116478 ~ 17120284 (-)
hs3st4 hs3st4,LOC107703335,LOC107568293,LOC107741793,LOC106601107,LOC105013403,LOC106607349 coding upstream 199303 17259805 ~ 17348605 (-)
usp31 usp31,LOC107674671,LOC107565772,LOC107550315,LOC107703377 coding upstream 443375 17503877 ~ 17526491 (-)
G20781 NA non-coding downstream 102712 16945754 ~ 16946203 (-)
LOC122341878 NA non-coding downstream 172834 16874664 ~ 16876081 (-)
G20753 NA non-coding downstream 263707 16784990 ~ 16785208 (-)
G20752 NA non-coding downstream 265090 16783204 ~ 16783825 (-)
G20717 NA non-coding downstream 349493 16691165 ~ 16699422 (-)
G20877 NA non-coding upstream 97894 17158396 ~ 17198716 (-)
G20895 NA non-coding upstream 397504 17458006 ~ 17458330 (-)
LOC122342167 NA non-coding upstream 439436 17499938 ~ 17501443 (-)
G20933 NA non-coding upstream 509066 17569568 ~ 17570455 (-)
G20936 NA non-coding upstream 510799 17571301 ~ 17571660 (-)
snn snn,LOC107564698,LOC107703342 other downstream 6501 17039187 ~ 17042414 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other downstream 174928 16862725 ~ 16873987 (-)
mafk mafk,LOC107703391,LOC107674662 other downstream 319226 16715721 ~ 16729689 (-)
LOC122341847 NA other downstream 593436 16453074 ~ 16455479 (-)
G20680 LOC101886504,LOC101886427 other downstream 597115 16451140 ~ 16451800 (-)
h3f3a h3f3b,H3F3A,LOC105909691,LOC107388308,LOC107572204,LOC101073377 other upstream 603003 17663505 ~ 17691250 (-)
LOC122340174 LOC107710648,LOC107674639,LOC107565762 other upstream 646231 17706733 ~ 17718609 (-)
G21010 NA other upstream 860446 17920948 ~ 17921707 (-)
LOC122333861 eci1,LOC107568619,LOC107690250,LOC107733832,LOC107590612,LOC107685938 other upstream 975008 18035510 ~ 18044587 (-)
dexi dexi,LOC107590611,LOC107567922,LOC107733843,LOC107736577,LOC107685935,LOC107690264 other upstream 1381363 18441865 ~ 18443213 (-)

Expression


Co-expression Network