ppl (ppl,LOC107601282,LOC107654502,LOC107688119,LOC107590382)


Basic Information

Item Value
gene id ppl
gene name ppl,LOC107601282,LOC107654502,LOC107688119,LOC107590382
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14138372 ~ 14150970 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235128.1
TAAAAGCACGGCTAACCTTGTCGGACAGCGAGCGCTCGTGCTGTTGGGAGGGTAGTGGCTGTTTCGTTCGTTGTGGGCGTTGTATGCGAGGTGTACCTGTCCTGGGACACTCGTCAGGTAGAGAAACGACAGACAGCAGACCGGGATCCTAACCGTGCCATCTAAGCAGAAACTCCGCAGCTGTCACCATGTTCAGAAAGAAGACCGGAAAGACCAGCGTGGCCATCAGCGATAAAAGACCGCCTGACACTGATTTGGCGACCCTGATCGACAAGTTGCAGAAAAATGCAGACAAGGTGGAGAAGAACATCATTGAGACGGAACAGAATCTCAACAGGGACATCAAGAAGATCAATGAGGGCAAGCAACCCCTCTACCAGGAGGACACCAACAAGAGGATCCTGAACTCACTGGAGCTGTTGAATAGTCTGGATGAAGATGCATCCAATGCCTCTCGTTTGCAGCACCCTCAAGCTGAAATGATTGAGAAGGATATGAGACAACTGCGAGTGCGTGTGATGAAGCTCCGCGAGGAACATGATCGCATTTACCACATCACACGATCAGAGCAGATTCCCATTGTGAACTGGGGAAAGATCGTTGACGAGAAACTGGCAAATGTGAACAACAAAGGATACGGACAAGATCTGCTGATCGTCGAGAATGAATTGGAGGAGCACAATATTTTCCACAGTGAAGTCGAGGCACTGGCTCCGTACATCACAGGAAACAGGGACAGTCTGGATGGTCAACAGGCAAAGTACAACAAACTACTGGCGAGCTCATCTGCACGTCAGAAGAACCTGCTCAGTTTGAGGGACTACATGCAGCGCTGCACTAATGAGCTCTACTGGATGGAGCAGCAAGCTGAAGAGCGAACCGCGTATGACTGGAGCGACAACAACCTGGACTACCCTGCCCGAAAGAGGCAGTATGAGAACTTCATTAGCAAGTGTCTGGAGGCTAAGGAGAAGAGCATCACCCAGCTGAATGAAGATGGAGAGGAACTTATTGAGCAGAACCATCCAGGAAAAAATGTCATTGGGGCACACATGGATGCCGTACATGCGGATTGGAAGGAATACCTCAATCTGCTCATCTGTGAGGAGAACCACCTCAAGAACATGGATGATTATCACAAATTCCACAAGGATGCAAGAGACACCAGCGATTTGTTGAAGCGCCTGGAAACCGAAATCAACCAGAAGTACAACCCTGAGTTTAAAGATATGTACCAGATGGAGGGCCTGATTGCTGACCTAAATGATCAAGCAAAGGCCATGGACCATTACGACGAGCGCCTGAAAGCTCTTCAGAAGCGCAGTCTGCAGGTGCTCCCTCTGAAGTACCGCAGGGAGACTCCTCAGAAACTGCTCCCTATCGAGGCTCTCTGTGAATACGAGACTAATGAGGGTTCAATTTTGCGAGGGGAGCGGTACACCCTGCTCAGGAACAATGGGTCAAAATGGGACGTGAAGGACGCAAATGGCCGCACCATGAGTGTTCCAGCTGTGTGCTTCATAATTCCTCCAACCGACCCTGAGGCTGTGGCCGTTGCTGATAATCTAATAAACCAGCACAAGGGTATCAAGCAGAAAGTAGCCAGCAGCAAATCTGCACTACAGGGACGACTGGCAGAGCTGAAGAAGGATAGTACAGGAGGTCAAGATAAACAAGAGCAGCAATGCCGTCAGCTGATGGCAGGACTGGATAAAGTGGTCGGTGATCTGGATAAGCAGGAGAAGGCCATTTACTCTCGTGTGCGCCCCCCACTGGAGCAGACACGTCCTGTGCAAGACAGCGCTGACCGGCTGCAGGACATTAAGGACATTGCTGCTGCTGTTCGTAAGGTAGAGCCAGAAAAGTCTACAAAAGTGCAGGAAGCTGAGAGTTTCCTCAAATCTTCTCCCAAATGTGCAAGTGCACCACAGCTCTACTCTAAGGTGGATGaggcaaacaaaaaatacaataaagttgATTTGCTTTTGAAAAGTGCTGATGACAAACTGCAGAACTCCTATCGGCTTGAGAATTCTCTGCAGAATGGCAAAGCTCTGCTGTCCTCTTATGAGAACAAACTGGCAAGAGAGGAGGTCGCTCCATCTGACCCCACCTCACTGGACAAGACCCAGCGTGAGTTGGCGGATATTGCATCTGAGCTGAGGAGCAAAAGATCTACTGTCACAGAGACTGAGCAGAACCTGAGAGATGCCAAGGCCAGCTGCAACAACATGGCCAACAAAGTGCAAGAACATTGCCCTGATATTGAGAGGCAGGAGGCTGAAGTTCAGAAACTCACCAAGCGCTTTGACAACCTGAACAGACAGGTTGAAGCAAGATCACAGTGTCTGCAAAGAGCCAAAACCGCCCATGCCAACTACAACAATGACTATGACAACCTTAATAGCTGGCTTTCTAGACTACCAAACTATGAGCCACGTGAAACCGATGACGTCAGACAGATTGATGACAAACTAAAAAATCAAAGAAATCTGCTCTCTGACATCACAAGAAAGGAATCAGACCTGAACAATGTGTCTAGAAATGCACAGCTTTATCAGCAAGCAGTCAAGGACTACGAAAATGAAGCGGAGCGGTTTAAATCCATCCTTGACCTTGAAGATGGTTTGGTTCCTCAGACATACAAAAGGAGCAGACTCGAATCTCCTGCCTTGAAAGTGAAGAGAGAGgaATCTGCAATTGAGTCCAAATTCACTGAAGCAAATGCTGTGAACAAGCAGAGGCTGCAGAACCTGGAGTTTGCCCAAGGCCTTCTTAACCagCAACCAGAAGTTACAATAATCCAGCAAAATGTCCAGACGGTGAGATCCTCAGCCCCAGGAGAAGAGCCCTGGAGAATCAGAAAACAGCTTCAGGAGGAAATTCAGCGGAGAGACCAACTGGAAAGAGAAATTCAGACTGTccaaagtgacatttatttactAGAGGGCCAGAAACCGCAGGACACAATCGTCAAGAAAGAGCTCATCAAGAAGGTGCATGATCCTCAACTTGATGAAGAATACCACCGGGTTCAGCAGAAGCTATTAGAAGAAAGCAGGACCACTCGTGTCTTAGAGAGCGAGTTGGACACCCTCCGTGTAAAGCTGCGTGGAATTGAGACCGAAATGAAAGAAGGAGCTCAGCAGTATACAGTCAAAGAGGTGCTCCGCATTGAGAGGGACAGGGGACAGGAAGAAGAACTCAGGAGACTGAGAGAAGATCTTGAGGAACTTAAGAGACTGAAGATGGTCAGAGAGAATGAAATCATTCAGATTCAAAAGCAAGTGACTATTCTTGCAGAGGAGAAAAGCAGAGAGCAGGAAATCATCAGGGAGGAAGAAGTCATTAAGGTACAGAATGACCCTCAACTTGAGAGTGAGTACAGACTACTGCTTGAcaggaaacaaaaagaaatagaCAGCCGAAAGGAACTCGAAGATGAGCTTCGATTCCTGCAGGATAAACTAAGGCGTCTTGAAAAGGAAAAGGCAATGGCTGAGGAAAAGATTTCCATCAAAGAAGTACTTAAAGTTGAGAAAGATATTGCTTTGGAGAGAGAGGTAGACAACCTGAGAAGACAATACGAAGATGAAAAAACCAAGCGCAGCTCATtgctgagagagaaaacagacatGAATCGCAAGATCACCAGCCTGGAGGAAGAGAAGTCGAAGGTCATCATTCAGGAGAAAGTGCGCGAGATTGTTCGACCTGATCCGAAGGCGGAAGCGGAGGTGGCAAACCTTCGACTTGACCTTGTGGAGCAGCAGAGAAGATGCAGAGATTCAGAGCTCCAGCTGAAGACTTTCCAGGATGAATTGACAGTGCTAAGAAACAGAGGCCCACAAATTGAATACAAGGAAATCATCAAAGAGGTCATCAAATACAAGATTGACCCGGAAACGGAAAGAGAGCTGGAGAAGCTCAGGAATGAAATTGTGGACAAAACCCACCAGACAGAGAAATTTGAGATGGAGATTCTCCAACTCAAAGAGGAGATTCAAAGATGGAAAGACACCAAGCCTCAGATTAATACCAAAGAGGTTGTAAATGAGATCCTCCAGTACAGAGAAGATCCTAAGACCAAGGAGGAGATTGAGAGTCTGAAGCGGAAACTGTCTGAGGAACAGAGGAAACGTTTGGACCTGGAAAATGAAAGGGCCTCCAATGAAGAAAGGATCAGGATTAAGAAGATCGACTTGTCACAGGTGAGGGAGAAGGTTGTCCAGCAAGAGGTAGTGAAGATGGAGCAGGATCCCCTCTTGAGGTCTGAATGTGACACTTTCACTCAAAACATCAACAATgagcagaaacagagagaaatccTAAAAGAAGAGCTGATCAGGTTGCAGCATCAAAAGGCTGAATTCGACATTCAGCTTGAGGAGCTGGAACGAGAACGCAGAGCCCGCAGAGAAGCTGAACTTGAAATCCAGAGGCTGAGAGTGCGGCTCAATGAACTGGAGATCAGGGACAAGGAAAACCGAGAAAAGGTTACAGTTAAGCAAAAAGTTGTACTCCAGCAGGACCCTCAGCAAGAAAAAGAGCACTCTATCCTACGTCTTCAGGTTGAAGAGGAGAGGCACAAGCGGATGCTTTTGGAGAAGGAGTACAATGCCTTGTTGCAACAGCAGGAAATACTCGAGAGAACGGAAGTGCGTGAAAAAGTCGTGCGAACCGAAAAAATTCAAGTCGAGCGAGACCCTGAGGCTGAGATGGACATTATAAGGCTAAAGAAAAGCCttgaagaagaagagaaacGACGTCGTGAGCTGGACCAAGAGATGATCAACATGAACTCGAAGCTTTCCGAGATGGAGTTCACCAATACAAAATCATCCAAAGAACTTGACTACATTCGTGATGAAAGCAACAGGTTACAGCAGGAGAACCAACGCCTGCAGAACGAAGTAAGGAAACTGCAAGCCGAGATCGAGATCACGACAAAAGAAACCAGACACATCACTGAGACGTCTCCGGTGGAGAACAGCAGGAACCTGGAAATTCGACTGGAATCCTTGCAAAGAGAACTCACTGAACTTAAGCGCATGCGAATCGAGAAAGACGAAGAAATCGAAAAGCTTCAGAAGAGTCTGTCTGCAATGAGAGTGAAAAGGGAGCAGCGGGAAAGTCACCTCCGCCGCTCGATTGTCGTCATTGATCCGGACACCGGGAAGGAGATGAGGCCTGAGGAGGCTTACAAGCTCGGCCTGATCGACTGGAAAATGTTCGTCAACCTGCAGAGTCAAGAATGCGACTGGGAGGAGATCACAGTCAAGGGTCCAAGCGGCGAGTCCTCCGTTCTTCATGACAGAAAATCGGGCAAGAAGTTTGCCATTGAAGACGCTCTGAGGGCTGGAAACATCACAAACCGTCAGCTGCAACAGTATCAGAACAAAGAGATCAGCATCCAGGAGTTCGGCGTCATGCTGTCAGGCAGAGGCAAATGAATCTgttaatcaaaaaaaacaacatcatatACTGCTTGAATAAACGTGCTGTTTGTGTTCTCTGTATTCATTTTCTCAATAcaggatgtatttatttttaaatgcattcgtATACCAATGCAAGATGGTGTTCTTTTGGTTATGGTGCTGAATATGGGTTAATGTTTCTATCACTATACCTATGAATCTTCATTGAAGATTAGCGAGATATGAGAATTTTTACTGAAGTTTTACTGAAATGTAGTTCAGTTTTACTGTAATCTGATCTAATATATGCATACAAAATGTGTGCCTTGATGATAAAGTTATGGCCCTATCTGTCTCTCTTTATGCACTTTTTACTTGTGTCAGATTATTCTACTTTCATGTTTGatttgagattaaaaaaaaaattaaatgaagatAAATCAGAGTACTGTTATATTTTTCCCTCCATCTTTATCATGAAGTAATAAAAGCTGAAGCTGTCTTTGCGATCATTTTTACTTAACAAAACATGTAGGTGTCTTTCATCTGTGGTTTAAATGGTTCCCAtacaatacacaaacaaaataaaatacttaaaatgtttttgcagtagtatttttcaattttcagaACTAAAAACACTGGACATTTATTAAACCGCAGTAAAGTAAATTTACGATTAGGCATTCAGACCACAGTTGATATGACATTTTGTCATATCACATGATATTTATCAAATGCTAATATGGCCAGTGTCTATTCCATCACATCTTAAATTATGGTCATGTTTAATAGCTTtggtaatgacatttttatgcatatttagaataaaatgtccaatgtttttatttattacattttctccTAGCTTTTTCACACAtaatttcatactttttatgttattttacataatttgacaaaataaacTTTCATCTTTATGGCTGA

Function

symbol description
ppl Predicted to enable structural molecule activity. Predicted to be involved in intermediate filament cytoskeleton organization and wound healing. Predicted to be located in cytoskeleton. Predicted to be active in cytoplasm and membrane. Predicted to colocalize with intermediate filament. Is expressed in several structures, including EVL; digestive system; fin; periderm; and sensory system. Orthologous to human PPL (periplakin).

NR:

description
PREDICTED: periplakin

GO: NA

KEGG:

id description
K10386 PPL; periplakin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235128.1 True 6365 mRNA 0.45 22 14138372 14150970

Neighbor

gene id symbol gene type direction distance location
glyr1 glyr1,LOC107688117,LOC107590383,LOC107721499 coding downstream 1670 14126803 ~ 14136702 (-)
rogdi rogdi,LOC107719995,LOC107688116,LOC107654499,LOC107721519,LOC107601278 coding downstream 11794 14122139 ~ 14126578 (-)
cog1 cog1,LOC107654497,LOC107601277,LOC107721521,LOC107590385,LOC107688115,LOC107719994 coding downstream 18782 14111547 ~ 14119590 (-)
gna13b LOC107654495,LOC107721501,LOC107601276,LOC107688114,LOC107719992,LOC107590387,LOC108438014 coding downstream 36414 14085488 ~ 14101958 (-)
prkar1aa prkar1aa,prkar1a,LOC107654492,LOC107721504,LOC107590390,LOC106606198,LOC108274040 coding downstream 81650 14049482 ~ 14056722 (-)
rrn3 rrn3,LOC107654503,LOC107601284,LOC107590381,LOC107688121,LOC107721468 coding upstream 44808 14195778 ~ 14202180 (-)
mpv17l si:dkeyp-72e1.7,LOC107654467,LOC107721477,LOC107720000,LOC107590380,LOC107688122,LOC103040893,LOC108438006 coding upstream 55384 14206354 ~ 14208231 (-)
myh11b myh11b,myh11,LOC107654508,LOC107721492,LOC107601223,LOC107590431 coding upstream 88137 14239107 ~ 14252949 (-)
abcc6b.2 abcc6b.2,LOC107721491,LOC107590377,LOC107720004,LOC107688123,LOC107601225,LOC108437999 coding upstream 122416 14273386 ~ 14292943 (-)
ramp2 LOC107654510,LOC107721488,LOC107601292,LOC107590449 coding upstream 152180 14303150 ~ 14309441 (-)
G20029 zgc:86896,LOC107654493,LOC107721506,LOC107590453,LOC107719989,LOC107601274 non-coding downstream 77880 14059581 ~ 14060492 (-)
LOC122342150 NA non-coding downstream 208095 13917700 ~ 13930277 (-)
G19947 NA non-coding downstream 239440 13897631 ~ 13898932 (-)
G19872 NA non-coding downstream 504587 13633559 ~ 13633785 (-)
G19811 NA non-coding downstream 780583 13357579 ~ 13357789 (-)
G20095 LOC107719998,LOC107601286,LOC107688145,LOC107590379 non-coding upstream 69115 14220085 ~ 14221797 (-)
G20202 NA non-coding upstream 234391 14385361 ~ 14388398 (-)
G20212 NA non-coding upstream 282735 14433705 ~ 14459554 (-)
G20217 LOC107601298,LOC107721528,LOC107590427,LOC107720013,LOC107688135,LOC107654518 non-coding upstream 298505 14449475 ~ 14451028 (-)
G20231 NA non-coding upstream 452224 14603194 ~ 14604214 (-)
G19933 NA other downstream 332394 13805368 ~ 13805978 (-)
gng13b NA other downstream 345770 13786009 ~ 13792602 (-)
G19676 LOC107690708 other downstream 1070182 13005996 ~ 13068190 (-)
G19700 NA other downstream 1090878 13047041 ~ 13047494 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 1375282 12681990 ~ 12763090 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 51960 14202930 ~ 14204350 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other upstream 284177 14435147 ~ 14439541 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 969836 15120806 ~ 15179359 (-)
LOC122341947 NA other upstream 990847 15141817 ~ 15145608 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 1447800 15598770 ~ 15600348 (-)

Expression


Co-expression Network