nprl3 (LOC107711278,LOC107596811,LOC107754028,LOC107670498,LOC107672508)


Basic Information

Item Value
gene id nprl3
gene name LOC107711278,LOC107596811,LOC107754028,LOC107670498,LOC107672508
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9761330 ~ 9774275 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235214.1
TGTTTCTACGGCGCGCACAGTGtaacaccaaacactgatttgCTGTAAAGCTGTATGTTTCCGTCAAGGATGACAGCAATTTAGCGTTTATTGGTAAACTTTTCACTGTTAGGATAGTTGCACATATTCACATGGCGCCAGAAGGTGACTGAGGATATTTTGAGTTGCTAACTTGAGGCTGATAGCGTAGCGTTAACTGGTTTGCGTAAATGTAGTGGTTTTGGCTAACTCGGCGAGCAGGCTAAAAGGATTGTCATGCTGCTGTTATCTCACAAATTCGTTTAGTTcagttcttttatttgtttccatCTACTTTGAGATGCAGTTGAACGAATGCACCAGATGTCTTATCCAGTTAAAGTCTCACGCCGTGCAAGCTTTTAGTTGTCTACACCCGTCCAGAGCTGTAATGTAAACGCTACATTGCACGTTTTTAGCCCCAGCTGTTCGCTTGGCAGTTCGCTCGAGATTATATACAGTTAGGAAAACGTATCAGGATGTACAAGCAGTGGTCTGTAGATTTAAACGCAGATGCGAAGCTGAAGGGGAAACAGTCTGAATCCAGCCTGCAGCCAAACGGAGAAAAGACGAGCCCCATAAGTGTTATACTGGTTAGCTCTGGCAGCAGAGGAAACAAATTGCTCTTCCGATACCCCTTTCAGAGGGTATCTGAAAACACCTCATCGGCGACATCAAAACAGCGGAGTCCATATGCGTTGAATACTTCGGGTGACTCTATAGAGGACCAGGATGGTGATTCAAGAGAACAAACTCCACTAACTGATGAACAGTTGGTAGCAGGGTTTTCCGATATTATTCTCGCTACCATCCTGGCCACCAAATCTGATATGTGCGGCAAGAAGTTTGAACTAAAAATAGACAACGTGCGCTTCGTCGGACACCCAACCTTACTGCAGCCTCCACATACTATTCAGGTTTCCAAGACTGACCCCTCCCCCAAAAGAGAACTCCCCACCATGATCCTGTTCAGTGTTGTCTTTGCATTAAGGGCCAATGCAGACGCCTCGGTCATCAACTGTATGCACAATCTGTCTCGCCGCATTGCCATCGCCCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCAGAGAGGCCAAGCTCATGCTGGCGGTGCAGGACGAGGTCACCACCATGACCGAGACAGACGGCACTCCGCAGTCACCGTTTCGCCAGATCCTTCCCAAGTGTAAATTAGCAAGAGACCTGAAAGAGGCTTATGACAGCCTCTGCACAACCGGAGTGGTTCGGCTTCACATTAATAACTGGCTTGAGGTCAGTTTCTGCCTGCCTCACAAAATCCACCGCGTAGGAGGGAAACACATCCCACCAGAAGCTCTTGAGCGCAGCCTAAAGGCCATTCGGCCGTATCACGCACTGCTGCTCCTGGACAGTGAGAAGGCCTTGCTAGCTCAGCTCCCTCTGGACTGTTCTCCTGCTCTGGTGCGCCTCATCAAAACCTGCTCAGCCGTCAAGAACCTGCAGCAGCTGGCTCAGGATGCTGACCTGGCTCTCCTACAGATCTTTCAGATAGCTGCACATCTGGTATACTGGGGTAAAGCTATCATTATCTATCCTCTCTGTGAGAACAACGTGTATATGCTGTCTCCCCACGCAAACATCTGCATCTACTCTCCTCTGGCTGAGCAATTTGCCCTCCAATTTCCAGGTCATGACCTGCCCTCCATGTTAGCAAAGTTCTCACTTCCTGTATCTCTGTCTGAGTTCAGGAACCCACTGGATGCCCCCGTGCATGAGGCCCAGCTCATTCAGATGGTGGTCTGGATGCTCCAGCACCGGCTGCTGTTTCAGCTCCACACGTATGTTTGTCTGCTGGTCTCACCCATTGAGGAGGAGCCTGGTCTGCGAGAGGACGAGCCGCCCCTAGTCACACGCGTCACAGGCCGGAGTCTGAGCACACCCAGCGCCCTGAGTTTCGGCTCGCCCACAAGCAGCGATGACATGACCCTCACGAGTCCCAGTATGGATAACTCCAGCGCTGAGCTCCAGACTGGAGGAGACTCTCCTCTCAATAAAAGAATGACAGAAACGCTTCTGGCCAGCCTGAATGAACATGAGCGGCAGGCCATCCTCCGTGTCCCTGCAGCACAGAACCCAGAGGACCTGCgcttgtttgccagGCTGTTGCATTACTTCAGAGGCCACCATCACTTGGAAGAGATTATGTACAATGAGAACATGCGTCGCTCGCAGCTGAAAACTTTATTTGACAAGTTTCGCAGCGTCTTAGTGATAACTAACCACGAAGACCCCATCATCTCTCTGTTCCAGTCTCCACCAGACTAAAATGGGTCATTCGACTCGCTGTCAGAAGATGGTGTGATGTGTTTTGCTTATCGTAAGTggctttaaaaaagaagaaacgcTTTCAACCCGTTTAGTTTCCTAAGTGGATTATGAAGTGAGACTCACATAAACTACTGTATATAGCTGTATTGACCAAAGATTTTTATGTTGTCATGATTTTACCTCACGTgaggtttattttaataaacgaTTCAGGGGT
>XM_043235215.1
GTGTTTCTACGGCGCGCACAGTGtaacaccaaacactgatttgCTGTAAAGCTGTATGTTTCCGTCAAGGATGACAGCAATTTAGCGTTTATTGGTAAACTTTTCACTGTTAGGATAGTTGCACATATTCACATGGCGCCAGAAGGTGACTGAGGATATTTTGAGTTGCTAACTTGAGGCTGATAGCGTAGCGTTAACTGGTTTGCGTAAATGTAGTGGTTTTGGCTAACTCGGCGAGCAGGCTAAAAGGATTGTCATGCTGCTGTTATCTCACAAATTCGTTTAGTTcagttcttttatttgtttccatCTACTTTGAGATGCAGTTGAACGAATGCACCAGATGTCTTATCCAGTTAAAGTCTCACGCCGTGCAAGCTTTTAGTTGTCTACACCCGTCCAGAGCTGTAATGTAAACGCTACATTGCACGTTTTTAGCCCCAGCTGTTCGCTTGGCAGTTCGCTCGAGATTATATACAGTTAGGAAAACGTATCAGGATGTACAAGCAGTGGTCTGTAGATTTAAACGCAGATGCGAAGCTGAAGGGGAAACAGTCTGAATCCAGCCTGCAGCCAAACGGAGAAAAGACGAGCCCCATAAGTGTTATACTGGTTAGCTCTGGCAGCAGAGGAAACAAATTGCTCTTCCGATACCCCTTTCAGAGGGTATCTGAAAACACCTCATCGGCGACATCAAAACAGCGGAGTCCATATGCGTTGAATACTTCGGGTGACTCTATAGAGGACCAGGATGGTGATTCAAGAGAACAAACTCCACTAACTGATGAACAGTTGGTAGCAGGGTTTTCCGATATTATTCTCGCTACCATCCTGGCCACCAAATCTGATATGTGCGGCAAGAAGTTTGAACTAAAAATAGACAACGTGCGCTTCGTCGGACACCCAACCTTACTGCAGCCTCCACATACTATTCAGGTTTCCAAGACTGACCCCTCCCCCAAAAGAGAACTCCCCACCATGATCCTGTTCAGTGTTGTCTTTGCATTAAGGGCCAATGCAGACGCCTCGGTCATCAACTGTATGCACAATCTGTCTCGCCGCATTGCCATCGCCCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCAGAGAGGCCAAGCTCATGCTGGCGGTGCAGGACGAGGTCACCACCATGACCGAGAACGGCACTCCGCAGTCACCGTTTCGCCAGATCCTTCCCAAGTGTAAATTAGCAAGAGACCTGAAAGAGGCTTATGACAGCCTCTGCACAACCGGAGTGGTTCGGCTTCACATTAATAACTGGCTTGAGGTCAGTTTCTGCCTGCCTCACAAAATCCACCGCGTAGGAGGGAAACACATCCCACCAGAAGCTCTTGAGCGCAGCCTAAAGGCCATTCGGCCGTATCACGCACTGCTGCTCCTGGACAGTGAGAAGGCCTTGCTAGCTCAGCTCCCTCTGGACTGTTCTCCTGCTCTGGTGCGCCTCATCAAAACCTGCTCAGCCGTCAAGAACCTGCAGCAGCTGGCTCAGGATGCTGACCTGGCTCTCCTACAGATCTTTCAGATAGCTGCACATCTGGTATACTGGGGTAAAGCTATCATTATCTATCCTCTCTGTGAGAACAACGTGTATATGCTGTCTCCCCACGCAAACATCTGCATCTACTCTCCTCTGGCTGAGCAATTTGCCCTCCAATTTCCAGGTCATGACCTGCCCTCCATGTTAGCAAAGTTCTCACTTCCTGTATCTCTGTCTGAGTTCAGGAACCCACTGGATGCCCCCGTGCATGAGGCCCAGCTCATTCAGATGGTGGTCTGGATGCTCCAGCACCGGCTGCTGTTTCAGCTCCACACGTATGTTTGTCTGCTGGTCTCACCCATTGAGGAGGAGCCTGGTCTGCGAGAGGACGAGCCGCCCCTAGTCACACGCGTCACAGGCCGGAGTCTGAGCACACCCAGCGCCCTGAGTTTCGGCTCGCCCACAAGCAGCGATGACATGACCCTCACGAGTCCCAGTATGGATAACTCCAGCGCTGAGCTCCAGACTGGAGGAGACTCTCCTCTCAATAAAAGAATGACAGAAACGCTTCTGGCCAGCCTGAATGAACATGAGCGGCAGGCCATCCTCCGTGTCCCTGCAGCACAGAACCCAGAGGACCTGCgcttgtttgccagGCTGTTGCATTACTTCAGAGGCCACCATCACTTGGAAGAGATTATGTACAATGAGAACATGCGTCGCTCGCAGCTGAAAACTTTATTTGACAAGTTTCGCAGCGTCTTAGTGATAACTAACCACGAAGACCCCATCATCTCTCTGTTCCAGTCTCCACCAGACTAAAATGGGTCATTCGACTCGCTGTCAGAAGATGGTGTGATGTGTTTTGCTTATCGTAAGTggctttaaaaaagaagaaacgcTTTCAACCCGTTTAGTTTCCTAAGTGGATTATGAAGTGAGACTCACATAAACTACTGTATATAGCTGTATTGACCAAAGATTTTTATGTTGTCATGATTTTACCTCACGTgaggtttattttaataaacgaTTCAGGGGT
>XM_043235217.1
TGTTTCTACGGCGCGCACAGTGtaacaccaaacactgatttgCTGTAAAGCTGTATGTTTCCGTCAAGGATGACAGCAATTTAGCGTTTATTGGTAAACTTTTCACTGTTAGGATAGTTGCACATATTCACATGGCGCCAGAAGGTGACTGAGGATATTTTGAGTTGCTAACTTGAGGCTGATAGCGTAGCGTTAACTGGTTTGCGTAAATGTAGTGGTTTTGGCTAACTCGGCGAGCAGGCTAAAAGGATTGTCATGCTGCTGTTATCTCACAAATTCGTTTAGTTcagttcttttatttgtttccatCTACTTTGAGATGCAGTTGAACGAATGCACCAGATGTCTTATCCAGTTAAAGTCTCACGCCGTGCAAGCTTTTAGTTGTCTACACCCGTCCAGAGCTGTAATGTAAACGCTACATTGCACGTTTTTAGCCCCAGCTGTTCGCTTGGCAGTTCGCTCGAGATTATATACAGTTAGGAAAACGTATCAGGATGTACAAGCAGTGGTCTGTAGATTTAAACGCAGATGCGAAGCTGAAGGGGAAACAGTCTGAATCCAGCCTGCAGCCAAACGGAGAAAAGACGAGCCCCATAAGTGTTATACTGGTTAGCTCTGGCAGCAGAGGAAACAAATTGCTCTTCCGATACCCCTTTCAGAGGGTATCTGAAAACACCTCATCGGCGACATCAAAACAGCGGAGTCCATATGCGTTGAATACTTCGGGTGACTCTATAGAGGACCAGGATGGTGATTCAAGGTTTTCCGATATTATTCTCGCTACCATCCTGGCCACCAAATCTGATATGTGCGGCAAGAAGTTTGAACTAAAAATAGACAACGTGCGCTTCGTCGGACACCCAACCTTACTGCAGCCTCCACATACTATTCAGGTTTCCAAGACTGACCCCTCCCCCAAAAGAGAACTCCCCACCATGATCCTGTTCAGTGTTGTCTTTGCATTAAGGGCCAATGCAGACGCCTCGGTCATCAACTGTATGCACAATCTGTCTCGCCGCATTGCCATCGCCCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCAGAGAGGCCAAGCTCATGCTGGCGGTGCAGGACGAGGTCACCACCATGACCGAGACAGACGGCACTCCGCAGTCACCGTTTCGCCAGATCCTTCCCAAGTGTAAATTAGCAAGAGACCTGAAAGAGGCTTATGACAGCCTCTGCACAACCGGAGTGGTTCGGCTTCACATTAATAACTGGCTTGAGGTCAGTTTCTGCCTGCCTCACAAAATCCACCGCGTAGGAGGGAAACACATCCCACCAGAAGCTCTTGAGCGCAGCCTAAAGGCCATTCGGCCGTATCACGCACTGCTGCTCCTGGACAGTGAGAAGGCCTTGCTAGCTCAGCTCCCTCTGGACTGTTCTCCTGCTCTGGTGCGCCTCATCAAAACCTGCTCAGCCGTCAAGAACCTGCAGCAGCTGGCTCAGGATGCTGACCTGGCTCTCCTACAGATCTTTCAGATAGCTGCACATCTGGTATACTGGGGTAAAGCTATCATTATCTATCCTCTCTGTGAGAACAACGTGTATATGCTGTCTCCCCACGCAAACATCTGCATCTACTCTCCTCTGGCTGAGCAATTTGCCCTCCAATTTCCAGGTCATGACCTGCCCTCCATGTTAGCAAAGTTCTCACTTCCTGTATCTCTGTCTGAGTTCAGGAACCCACTGGATGCCCCCGTGCATGAGGCCCAGCTCATTCAGATGGTGGTCTGGATGCTCCAGCACCGGCTGCTGTTTCAGCTCCACACGTATGTTTGTCTGCTGGTCTCACCCATTGAGGAGGAGCCTGGTCTGCGAGAGGACGAGCCGCCCCTAGTCACACGCGTCACAGGCCGGAGTCTGAGCACACCCAGCGCCCTGAGTTTCGGCTCGCCCACAAGCAGCGATGACATGACCCTCACGAGTCCCAGTATGGATAACTCCAGCGCTGAGCTCCAGACTGGAGGAGACTCTCCTCTCAATAAAAGAATGACAGAAACGCTTCTGGCCAGCCTGAATGAACATGAGCGGCAGGCCATCCTCCGTGTCCCTGCAGCACAGAACCCAGAGGACCTGCgcttgtttgccagGCTGTTGCATTACTTCAGAGGCCACCATCACTTGGAAGAGATTATGTACAATGAGAACATGCGTCGCTCGCAGCTGAAAACTTTATTTGACAAGTTTCGCAGCGTCTTAGTGATAACTAACCACGAAGACCCCATCATCTCTCTGTTCCAGTCTCCACCAGACTAAAATGGGTCATTCGACTCGCTGTCAGAAGATGGTGTGATGTGTTTTGCTTATCGTAAGTggctttaaaaaagaagaaacgcTTTCAACCCGTTTAGTTTCCTAAGTGGATTATGAAGTGAGACTCACATAAACTACTGTATATAGCTGTATTGACCAAAGATTTTTATGTTGTCATGATTTTACCTCACGTgaggtttattttaataaacgaTTCAGGGGT

Function

NR:

description
PREDICTED: nitrogen permease regulator 3-like protein isoform X1

GO: NA

KEGG:

id description
K20406 NPRL3; nitrogen permease regulator 3-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235214.1 True 2547 mRNA 0.49 14 9761330 9774274
XM_043235215.1 False 2545 mRNA 0.49 14 9761330 9774275
XM_043235217.1 False 2508 mRNA 0.49 13 9761330 9774274

Neighbor

gene id symbol gene type direction distance location
rhbdf1a rhbdf1a,LOC107587928,LOC107711277,LOC107596807,LOC107672493,LOC107754036,LOC107670513 coding downstream 21173 9698064 ~ 9740157 (-)
ubald1b ubald1b,LOC107754052,LOC107672511,LOC107670507,LOC107596822,LOC107587929 coding downstream 82379 9675218 ~ 9678951 (-)
s1pr2 s1pr2,LOC107711272,LOC107587933,LOC107672500,LOC107596814,LOC107754042 coding downstream 131418 9607284 ~ 9629912 (-)
dnmt1 dnmt1,LOC107587934,LOC107672482,LOC107670489 coding downstream 156317 9592315 ~ 9605013 (-)
angptl6 LOC107672431,LOC107587937,LOC107711167 coding downstream 183720 9569453 ~ 9577610 (-)
hbba2 zgc:92880,LOC107754031,LOC107711188,LOC107587925,LOC107596824,LOC107672461 coding upstream 2399 9776674 ~ 9777433 (-)
hbba1 ba2,ba1 coding upstream 9356 9783631 ~ 9784425 (-)
hbae1.1 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding upstream 17267 9791542 ~ 9792514 (-)
LOC122331237 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding upstream 20430 9794705 ~ 9795658 (-)
LOC122341747 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding upstream 23724 9797999 ~ 9798799 (-)
G18623 NA non-coding downstream 7808 9753235 ~ 9753522 (-)
G18608 NA non-coding downstream 114764 9646313 ~ 9646566 (-)
G18602 NA non-coding downstream 170039 9589921 ~ 9591291 (-)
G18599 NA non-coding downstream 189525 9571600 ~ 9571805 (-)
LOC122342127 NA non-coding downstream 227543 9512446 ~ 9533787 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding upstream 10974 9785249 ~ 9786124 (-)
G18634 LOC107596828,LOC107588005,LOC107596825,LOC107703325,LOC107587921,LOC108440249,LOC108440213 non-coding upstream 15341 9789616 ~ 9793185 (-)
G18638 LOC107703356,LOC107674672,LOC107754020,LOC107596819 non-coding upstream 127256 9901531 ~ 9908617 (-)
G18717 NA non-coding upstream 627558 10401833 ~ 10402211 (-)
G18745 NA non-coding upstream 799892 10574167 ~ 10579140 (-)
G18433 LOC107670519,LOC107563315 other downstream 298425 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 623241 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 753887 8992714 ~ 9007443 (-)
fmc1 NA other downstream 1362502 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 1542275 8218902 ~ 8219055 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 219558 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 620039 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 1237661 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 1637710 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 1919997 11694272 ~ 11714719 (-)

Expression


Co-expression Network