LOC122341693 (LOC107739398,LOC107754510,LOC107661018,LOC107689062)


Basic Information

Item Value
gene id LOC122341693
gene name LOC107739398,LOC107754510,LOC107661018,LOC107689062
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20430369 ~ 20443456 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235236.1
TTTCTCCAAGTATAGGTCTCTGCAGGGACCCCTCCTTCTCCGGGACGACACACCTACCAGGGCTCTTATTATAAACCATCGCGCAGCATTCACTCAGTCGTATTAAACTGACGGACCCGACCTCAGGCTGGACGCACTCTTCTGAAACCtttGTGAGGAGCAACAGTGGGAAGAAACATGGACGCTGATCAGCTGCTTGGTGCCTCAATCATCAGGATCCCGCCTCACCACTACATCCATGTGTTGGATCAGAACACCAACATTGCTCGGGTGGAGCTGGGCCCTCTCACCTATATACGCCAGGACAATGAGAGGGTCTTGTTCGCCCCCGTCCGTATGATCATGGTGCCGCCCAGGCACTATTGTGTTGTGCTCAACCCTGTTGCCCGTAACGATGAAGGCCAAGTTCAGTTTGATGCATCAGGCCAAGCTAAGCTCAGACATGCTGACCTGGAGATCCGCCTGACCCAGGACCCGTTCCCCCTCTACCCTGGTGAAGAGATTCAGAAGGATGTGACGACACTGCAGATTGTGTATCCGGACACAGCCCTGCGTCTGCAGGCCCTGCTGGACTTTGAAGAGGAGGGAGGAGACAAGAGGGTAGCGGGAGACGAGTGGCTGTTTGAGGGTCCAGGAACATACATTCCCAGGAAGGAGGTGGCGGTACTTGAAGTCATAAAAGCCACGGTGATCAGAGAGAATCAGGCCATTCGCCTCAGAGCGCGCAAAGAGGGCCGTGACCGCAGTGGAGTGCAAAGAGTTACTGgagaGGAATGGCAGGTGAGTAAGGTGGGGGCTTATCTGCCTGGAGCTCACGAAGAGGTGGTGGATATCGTCAATGCTTTCATCCTCACGGACAAGAAAGCTCTGCACGTGCGTGCCCTTCGCCCGTTCCGTGACGCCGCGGGCCGAGAGCGGCGCACCGGAGAAGAGTGGCTGGTGACCGTGGCGGACCGTGAGGCTCACATTCCCTCTGTGGCTGAGGAGGTTGTCGGGGTGGTGGACGTGACTACTCTGAACAGCAGGCAGTACTGCGTGGTCCTGGACCCCGTGGGGGCTGATGGGAAACCTCAGCTCGGACAGAAGAGAGTGGTGAAGGGTGAGCGTTCGTTCTTCCTCCGGCCAGGAGAGCATTTGGAGAACGGCATTCAGGATGTGTATGTTCTGTCAGAGGAGGAGGGCCTCGTGCTCCGTGCTGTCGAAGCCTTCATTGACACCGAGGGGCAGGAAGAGGCAGATGAAGATGAAGGGGAAAGCCAAGCCAAAAAGAGGGGAATACAGCGGCGTCCAGGTGACCGCTGGATGCTGCGCGGCCCGATCGAATACGTGCCGCCCGCCACCGTAGAGGTGCTGCTTAGACGAGATGCTATCCCGCTGGATGAGAATGAGGGCATTTACGTCCGGGACATCAAAACTGGAAAGGTGCGTGCTGTGATTGGCCAGACCTACATGCTAACGCAGGATGAGGAGCTGTGGGAGAAAGCGCTTCCAGCCAATGTGGAGACTCTTCTGTCTCAGTCCCGTGACCCGATGGCTGACCGCTCGGAGCGAGGAAGAAACTTTGAGCAAACTGAGAGAGATAAAAACAGAGTGGTGTCCTATCGTGTCCCTCACAATGCGGCCGTGCAGGTGTATGACTACAGAGAGAAGAAGGCCAGGGTGGTGTTTGGCCCTGAGATGGTGATGCTGGGACCTGATGAGCAGTTTACAGTTCTTTCCCTTTCTGGAGATAAACCCAAACGTCCTAACGTCATCAAAACCATTTGTCTGCTGCTTGGCCCAGACTTTTGCACGGACATCATCACCATCGAGACGGCCGATCACGCTCGCTTGCAGCTGCAGCTCTCTTACAACTGGCACTTTGATATCAAACCTCCCGCCGAAGCGGCCAAGGCCACGGCGCTGTTCTCTGTGCCAGACTTTGTGGGTGACGCGTGCAAAGCCATCGCTTCCAGAATCAGAGGAGCGGTTGCTTCAGTGCAGTTTGACGATTTCCACAAGAACTCCAACAGGATCATCTGTTCGGCCGTCTTTGGTTTTGATGAGAAGCTTGCGGTGCGGTCCAGTCTGCGCTTCAATCAGAACGGGCTAGTCATCAGCAGCGTGGACATCCAGTCTGTGGAGCCGGTGGACCAGCGCACCCGTGACGCCCTGCAGAAGAGTGTGCAACTAGCCATCGAAATCACCACCAATTCACAGGAGGCTGCTGCACGACACGAGGCAGAGCGTCTGGAGCAGGAGGCTCGGGGTCGCCTGGAGAGGCAGAAGATCACAGACCAGGCAGAGGCAGAGAAAGCCAGGAAGGAGCTGCTTGAGCTGGAGGCTCAGAGTGCTGCAGTGGAGAGTACCGGAGCGGCGAAGGCTGAGGCACAATCTAGAGCCGAGGCGGCTCGTATACAAGGAGAGGCAGCAGTCGAAGAGGCCAAGCTCAAAGCAGAGGCCCAGAAAATCGAGGCTGACGCTGAGCTGGCCCGTCTGTGTAAGGCACGTGAGCAGGAGCTGGGTTACAAGAAGGAGATGGACAACCTAGAGATAGGGAAGCAGCAGAAACTGGCAGAGATTGAGAGCCGGCGCTTCAAGGAGTTGATGGAGAACCTGGGCACAGAAACCCTGAAGGAAATGGCCCGAGCAGGGCCCGAACTGCAGGTGAAGCTCCTGCAGTCTTTGGGTCTGAAGTCTACTCTTATTACAGATGGCTCCTCTCCTATTAATCTCTTTACTACTGCCAATGGCCTTCTGGGGGCTCTGCAGGGTAAAGGACaggatgaataaatacaaaaacaggaGAGACAGAGGTTAAGAGGCCTTATACCACTTGATATgcataaatgaaaacttttttttttattcttaatagCTATTACAGCAAAGCCTGTAAGTGCAACATTATCAGTACCTTTGCTCAGATCATTGTAATAGATATATTTTCAGTCCACTAACACATAAATTTGTGTTTAAGTGTCATGCTGAAATATGCCTATGGTGCCTTAAATTCAGTTCAACCAAACAAGCTTTCTGGAATGTGTTTCTTTACTGTGCTTTGCTTTTTACAGCAATAAAAGAACATACAGTGTCCAGTAATACctcaaatgtcaaataaaacattatgcatTGCTCGTC
>XM_043235237.1
TTTCTCCAAGTATAGGTCTCTGCAGGGACCCCTCCTTCTCCGGGACGACACACCTACCAGGGCTCTTATTATAAACCATCGCGCAGCATTCACTCAGTCGTATTAAACTGACGGACCCGACCTCAGGCTGGACGCACTCTTCTGAAACCtttGTGAGGAGCAACAGTGGGAAGAAACATGGACGCTGATCAGCTGCTTGGTGCCTCAATCATCAGGATCCCGCCTCACCACTACATCCATGTGTTGGATCAGAACACCAACATTGCTCGGGTGGAGCTGGGCCCTCTCACCTATATACGCCAGGACAATGAGAGGGTCTTGTTCGCCCCCGTCCGTATGATCATGGTGCCGCCCAGGCACTATTGTGTTGTGCTCAACCCTGTTGCCCGTAACGATGAAGGCCAAGTTCAGTTTGATGCATCAGGCCAAGCTAAGCTCAGACATGCTGACCTGGAGATCCGCCTGACCCAGGACCCGTTCCCCCTCTACCCTGGTGAAGAGATTCAGAAGGATGTGACGACACTGCAGATTGTGTATCCGGACACAGCCCTGCGTCTGCAGGCCCTGCTGGACTTTGAAGAGGAGGGAGGAGACAAGAGGGTAGCGGGAGACGAGTGGCTGTTTGAGGGTCCAGGAACATACATTCCCAGGAAGGAGGTGGCGGTACTTGAAGTCATAAAAGCCACGGTGATCAGAGAGAATCAGGCCATTCGCCTCAGAGCGCGCAAAGAGGGCCGTGACCGCAGTGGAGTGCAAAGAGTTACTGgagaGGAATGGCAGGTGAGTAAGGTGGGGGCTTATCTGCCTGGAGCTCACGAAGAGGTGGTGGATATCGTCAATGCTTTCATCCTCACGGACAAGAAAGCTCTGCACGTGCGTGCCCTTCGCCCGTTCCGTGACGCCGCGGGCCGAGAGCGGCGCACCGGAGAAGAGTGGCTGGTGACCGTGGCGGACCGTGAGGCTCACATTCCCTCTGTGGCTGAGGAGGTTGTCGGGGTGGTGGACGTGACTACTCTGAACAGCAGGCAGTACTGCGTGGTCCTGGACCCCGTGGGGGCTGATGGGAAACCTCAGCTCGGACAGAAGAGAGTGGTGAAGGGTGAGCGTTCGTTCTTCCTCCGGCCAGGAGAGCATTTGGAGAACGGCATTCAGGATGTGTATGTTCTGTCAGAGGAGGAGGGCCTCGTGCTCCGTGCTGTCGAAGCCTTCATTGACACCGAGGGGGAAGAGGCAGATGAAGATGAAGGGGAAAGCCAAGCCAAAAAGAGGGGAATACAGCGGCGTCCAGGTGACCGCTGGATGCTGCGCGGCCCGATCGAATACGTGCCGCCCGCCACCGTAGAGGTGCTGCTTAGACGAGATGCTATCCCGCTGGATGAGAATGAGGGCATTTACGTCCGGGACATCAAAACTGGAAAGGTGCGTGCTGTGATTGGCCAGACCTACATGCTAACGCAGGATGAGGAGCTGTGGGAGAAAGCGCTTCCAGCCAATGTGGAGACTCTTCTGTCTCAGTCCCGTGACCCGATGGCTGACCGCTCGGAGCGAGGAAGAAACTTTGAGCAAACTGAGAGAGATAAAAACAGAGTGGTGTCCTATCGTGTCCCTCACAATGCGGCCGTGCAGGTGTATGACTACAGAGAGAAGAAGGCCAGGGTGGTGTTTGGCCCTGAGATGGTGATGCTGGGACCTGATGAGCAGTTTACAGTTCTTTCCCTTTCTGGAGATAAACCCAAACGTCCTAACGTCATCAAAACCATTTGTCTGCTGCTTGGCCCAGACTTTTGCACGGACATCATCACCATCGAGACGGCCGATCACGCTCGCTTGCAGCTGCAGCTCTCTTACAACTGGCACTTTGATATCAAACCTCCCGCCGAAGCGGCCAAGGCCACGGCGCTGTTCTCTGTGCCAGACTTTGTGGGTGACGCGTGCAAAGCCATCGCTTCCAGAATCAGAGGAGCGGTTGCTTCAGTGCAGTTTGACGATTTCCACAAGAACTCCAACAGGATCATCTGTTCGGCCGTCTTTGGTTTTGATGAGAAGCTTGCGGTGCGGTCCAGTCTGCGCTTCAATCAGAACGGGCTAGTCATCAGCAGCGTGGACATCCAGTCTGTGGAGCCGGTGGACCAGCGCACCCGTGACGCCCTGCAGAAGAGTGTGCAACTAGCCATCGAAATCACCACCAATTCACAGGAGGCTGCTGCACGACACGAGGCAGAGCGTCTGGAGCAGGAGGCTCGGGGTCGCCTGGAGAGGCAGAAGATCACAGACCAGGCAGAGGCAGAGAAAGCCAGGAAGGAGCTGCTTGAGCTGGAGGCTCAGAGTGCTGCAGTGGAGAGTACCGGAGCGGCGAAGGCTGAGGCACAATCTAGAGCCGAGGCGGCTCGTATACAAGGAGAGGCAGCAGTCGAAGAGGCCAAGCTCAAAGCAGAGGCCCAGAAAATCGAGGCTGACGCTGAGCTGGCCCGTCTGTGTAAGGCACGTGAGCAGGAGCTGGGTTACAAGAAGGAGATGGACAACCTAGAGATAGGGAAGCAGCAGAAACTGGCAGAGATTGAGAGCCGGCGCTTCAAGGAGTTGATGGAGAACCTGGGCACAGAAACCCTGAAGGAAATGGCCCGAGCAGGGCCCGAACTGCAGGTGAAGCTCCTGCAGTCTTTGGGTCTGAAGTCTACTCTTATTACAGATGGCTCCTCTCCTATTAATCTCTTTACTACTGCCAATGGCCTTCTGGGGGCTCTGCAGGGTAAAGGACaggatgaataaatacaaaaacaggaGAGACAGAGGTTAAGAGGCCTTATACCACTTGATATgcataaatgaaaacttttttttttattcttaatagCTATTACAGCAAAGCCTGTAAGTGCAACATTATCAGTACCTTTGCTCAGATCATTGTAATAGATATATTTTCAGTCCACTAACACATAAATTTGTGTTTAAGTGTCATGCTGAAATATGCCTATGGTGCCTTAAATTCAGTTCAACCAAACAAGCTTTCTGGAATGTGTTTCTTTACTGTGCTTTGCTTTTTACAGCAATAAAAGAACATACAGTGTCCAGTAATACctcaaatgtcaaataaaacattatgcatTGCTCGTC

Function

NR:

description
PREDICTED: major vault protein isoform X1

GO:

id name namespace
GO:0001654 eye development biological_process
GO:0007420 brain development biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K17266 MVP; major vault protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235236.1 True 3120 mRNA 0.54 17 20430369 20443456
XM_043235237.1 False 3117 mRNA 0.54 17 20430369 20443456

Neighbor

gene id symbol gene type direction distance location
dhrs7b dhrs7b,LOC107745957,LOC107755107,LOC107689054,LOC107661099 coding upstream 43535 20382272 ~ 20386834 (+)
cramp1 cramp1,LOC107661046,LOC107745824,LOC107689053 coding upstream 48230 20367445 ~ 20382139 (+)
nme3 nme3,LOC107661191,LOC107689099,LOC107567334 coding upstream 96319 20331334 ~ 20334050 (+)
mrps34 mrps34,LOC107567325 coding upstream 99139 20328156 ~ 20331230 (+)
spsb3a spsb3a,spsb3,LOC107689049,LOC107670907,LOC107745892,LOC107754412 coding upstream 102817 20321945 ~ 20327552 (+)
LOC122342178 LOC107661000,LOC107567245,LOC798483,LOC107754527,LOC107552447 coding downstream 1452 20444908 ~ 20451990 (+)
zgc:66443 LOC107567227,LOC107754585,LOC107660992,LOC107552485,LOC107689065,LOC107739396 coding downstream 13682 20457138 ~ 20460351 (+)
zgc:66474 LOC107754539,LOC107567164,LOC107660968 coding downstream 17919 20461375 ~ 20469846 (+)
LOC122341263 LOC107689064 coding downstream 27525 20470981 ~ 20473411 (+)
si:dkey-93n13.2 LOC107754579,LOC107567217,LOC107661267,LOC107689100,LOC107739413,LOC107552446 coding downstream 30729 20474185 ~ 20477233 (+)
G21671 NA non-coding upstream 22042 20407792 ~ 20408327 (+)
G21669 NA non-coding upstream 36468 20393561 ~ 20393901 (+)
G21660 NA non-coding upstream 85013 20339891 ~ 20345356 (+)
G21661 NA non-coding upstream 88073 20341072 ~ 20342296 (+)
G21655 NA non-coding upstream 116225 20230015 ~ 20314144 (+)
G21687 NA non-coding downstream 36875 20480331 ~ 20518038 (+)
LOC122337901 NA non-coding downstream 277117 20720573 ~ 20726559 (+)
G21732 rnd2,LOC107708553,LOC107552458,LOC107754744,LOC107567027 non-coding downstream 280002 20723458 ~ 20724700 (+)
G21733 NA non-coding downstream 294521 20737977 ~ 20738225 (+)
G21739 NA non-coding downstream 327201 20770657 ~ 20770881 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 234648 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 316871 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 361116 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 1027193 19399408 ~ 19403176 (+)
G21213 NA other upstream 1138028 19291445 ~ 19292341 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 438742 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 852246 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 1194287 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 1531796 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 1533053 21976509 ~ 22025911 (+)

Expression


Co-expression Network