LOC122341701 (baiap2l1b,LOC107665916,LOC107548703,LOC107691223,LOC107713954,LOC107724726)


Basic Information

Item Value
gene id LOC122341701
gene name baiap2l1b,LOC107665916,LOC107548703,LOC107691223,LOC107713954,LOC107724726
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 26457623 ~ 26491717 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235252.1
GCACGCTCGCGTTCACGCGCTCATAAGTTTGAAGCGAAGCCTCTCTCGGCTGAACTCCGGCAGCCCGTTATTGAGCGAGACCGCGGTCGCTTTCGATCGGAAATCTATAACACGCTTCCGCGGACGGCCGTCTTGCTATGAGGACTTGAGGGAGGCGATAAGCGCGCTGTCCTGCCTGGCTTATTTGGGAGTTCTTCTCCCCCCCTCCCGTCCGAATAAACGACATCTGAGCGCGCGAGCTCGTCGCGAGAGGGGCAGAGGAATGTCGCGCGATCCGGACGAGGTGAACAAACTGACCGAGAGCACTTACAAGAATGTTATGGAACAGTTCAACCCCGGGTTGCGTAACCTCATAAACCTGGGAAAGAGCTACGAGAAAGCGGTTTCAGCCATGGTTCTGGCTGGGAAGCAGTACTTTGATGCCGTATCTAAGATCGGGGAGAACGCAGCCGTATCTCCAGTGTCCAGGGAACTGGGGGTCGTCCTGATGGAGATCTCAGACGTCCATCGGAAAGTCAACATGGAACTGGAGGAGaacTTCAGACGGTTTCATCGGGAGGTTATTGCGGAGTTGGAGAGGAAAACTGACATGGACGTGAAGTACATGACGGCCACGTTTAAGAGATATCAGACTGAACACAAGATGAAGCAGGACTCTCTGGAGAGATCGCAGTCAGACCTGAAGAAGCTCCGAAGGAAAAGTCAAGGAAAGAACGCTCCGAAGTATGAGAGTAAAGAGAACGAGTGTCTGGAGACTCTCACTCACCGTCAGATGGACATGCAGAAGTTCATCGCTGACGGCTGCCGGGAGGCTCTGCTGGAGGAGAAGAGGCGCTTCTGCTTCCTGGTGGACAAGCACTGCTCCTTCTCCTTCCAGATCTCTAATTTCCACGACAAGGCTCGAGAACTTCTGACGGAGAACCTGTCCACCTGGCAGGACAAATGCGGCGACGCTACCAATGTCCCCGATAGTGTGATGTCCATGATTGAAGGTCTGCGCACTCCGGTGTCCAACACTCCGCAGGCGTCTCCAGCCCTCCAGCGCCACAACAGAGCCAACTCGGACGCTATGATTCCAGCACCCCCAGCGCCGCCTCAGACGAGTCCCCTGGCCAACATGTTCAGTCAAGAGTCCTccaggagagaggagagagacacTGACTACAACAACGAGGACAACGGATTGTCCAGGTCTGTGTCGATGGCCACTGGCCTCAATCACATAGACAAAAGACCCAAAGTGCGTACCATTTTCCCCCACAAGTCTGGAAACAACAACACGCTGCTGAGTTTTGAAGAAGGAGACATTATCTCACTGCTGATTCCTGACGAGAGGGACGGCTGGCTTTACGGAGAgctgcagaaaaacaaacagcGGGGCTGGTTTCCATCATCTTACTGTCGCGCATACACAGAGCTAGCGGTAAATAACAGTATTGCTGGAAATCCTCCGATGCGCAGTAAGAGCGTGGCCAACCTCATGCAGAAGGACTCGGAGGACGACATGATGGTTCTGCCTCCCGCCGACTACAACGACTCACCCGTCAGGAGAAACTCCACCAAGAGCCTGATGCAGACGTACACCTCCACATACGATAACCCGGCGCTGCCTCAGTCAAACGGCCTGCCAAAGCATCCTATCCTGGGGGGAGGAAATCCATTCGCTACCGTCAAACTTCGGCCCACAGTCACCAATGACAGATCAGCACCCATCATCTGATCGACCCCGCGGAGACccgccgcacacacacacacacacacacacacacacacacacacacaccgttcaACCACTATTTATGTAAGTCCCCTttaaacctctctctctctctatgtatatatatatatatatatagagagagagagagagagagaaatcatcGTTTATGCATTTAGCTGTAATCAGATGCTTCACTTTTGAGTATCATTCTGTAAATACATGAGAGAAGACACACTAGATGGGAACCTGCTCAAGCAAGGAAAAGTCCTGATGATAGTGACGTGAACCCAAACACTGCTGACCCTCGAGCTGGTAACTAGTCAAGATGTTTACCAGAGTTAGCTGGCTAACTCGCTCAGCTGGCAACACCGTCATCTGCAGAAGCGCTTTTAGCTCCGTTTCCTTCTTTTAGATCAGCTTTGCTTTTATCAGCGTAGTCTTAACACTGAATGATACCGATCCGTCGTCGCTCAGTGGATGGGGATTTCTTTATCTTCCGCTGGGGGGAGACTATTCACTTGGCTCTGATTGTATCGATGCACTTTTCTGTTGATGTTGGACTGAGATCTTGTAGATCACTgctgtatgaaaataaaaatattttgtttcta

Function

symbol description
baiap2l1b Predicted to be involved in actin filament organization and positive regulation of cytoskeleton organization. Predicted to act upstream of or within plasma membrane organization; regulation of actin filament polymerization; and regulation of insulin receptor signaling pathway. Predicted to be active in cytosol and nucleoplasm. Orthologous to human BAIAP2L1 (BAR/IMD domain containing adaptor protein 2 like 1).

NR:

description
PREDICTED: brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 isoform X1

GO:

id name namespace
GO:0046847 filopodium assembly biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007165 signal transduction biological_process
GO:0017124 SH3 domain binding molecular_function
GO:0008093 cytoskeletal anchor activity molecular_function

KEGG:

id description
K20127 BAIAP2L1, IRTKS; BAI1-associated protein 2-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235252.1 True 2331 mRNA 0.51 14 26457623 26491717

Neighbor

gene id symbol gene type direction distance location
nptx2a nptx2a,LOC107665931,LOC107724745,LOC107713953,LOC107691222 coding upstream 79212 26364279 ~ 26378411 (+)
LOC122341389 NA coding upstream 98810 26358256 ~ 26358813 (+)
srebf1 srebf1,LOC107691218,LOC107713935 coding upstream 399291 26041813 ~ 26058332 (+)
LOC122341388 tom1l2 coding upstream 418730 26024217 ~ 26038893 (+)
LOC122341386 NA coding upstream 469514 25986278 ~ 25988109 (+)
tecpr1b LOC107665885,LOC107724727 coding downstream 8293 26500010 ~ 26515546 (+)
pvalb5 pvalb5,LOC107691230,LOC107724738,LOC107713944,LOC107548707,LOC107666047 coding downstream 50251 26541968 ~ 26546505 (+)
pvalb1 pvalb1,LOC107713958,LOC107565876,LOC108279005,LOC107691228,LOC108412819,LOC107665844 coding downstream 56057 26547774 ~ 26551456 (+)
pvalb4 pvalb4,LOC100305042,LOC107724737,LOC107665849,LOC107548706,LOC107565875 coding downstream 61163 26552880 ~ 26554257 (+)
pvalb8 pvalb8,LOC107724728,LOC107666119,LOC107548708,LOC107691229,LOC107666113,LOC103469263 coding downstream 63184 26554901 ~ 26559546 (+)
G23550 LOC107691223,LOC107724726,LOC107713954,LOC107548703,LOC107665916 non-coding upstream 21775 26428219 ~ 26435848 (+)
G23508 NA non-coding upstream 265781 26179232 ~ 26191842 (+)
G23189 NA non-coding upstream 323793 26131602 ~ 26133830 (+)
G23176 NA non-coding upstream 384934 26059352 ~ 26072689 (+)
G23170 NA non-coding upstream 509791 25947086 ~ 25947832 (+)
G23552 NA non-coding downstream 1229 26492946 ~ 26497967 (+)
G23594 helz,LOC107665819,LOC107691233,LOC107565856 non-coding downstream 153554 26645271 ~ 26646452 (+)
G23659 NA non-coding downstream 231095 26722812 ~ 26723027 (+)
G23664 LOC107548683,LOC107666079,LOC107654573,LOC107752704,LOC107743002 non-coding downstream 237091 26728808 ~ 26729365 (+)
G23692 NA non-coding downstream 333391 26825108 ~ 26834795 (+)
LOC122341778 gid4,LOC107724729,LOC107555661,LOC107713949,LOC107559524,LOC106601817,LOC101065567 other upstream 504876 25948054 ~ 25952747 (+)
LOC122341383 tom1l2 other upstream 545998 25894590 ~ 25911625 (+)
G23146 NA other upstream 607047 25837143 ~ 25850576 (+)
LOC122341783 arl16,LOC107583744 other upstream 623425 25832505 ~ 25834198 (+)
G23121 rsad1,LOC107755174,LOC107690008,LOC107670671 other upstream 795306 25661048 ~ 25662317 (+)
pitpnc1a pitpnc1,LOC107665814,LOC107691236,LOC107752702,LOC107743029,LOC108412868,LOC108274028,LOC107376579,LOC106903613 other downstream 159112 26650829 ~ 26705731 (+)
ubald2 ubald2,LOC107548684 other downstream 267346 26759063 ~ 26772903 (+)
srsf2b srsf2b,srsf2,LOC104923358,LOC107755521,LOC108430244 other downstream 306714 26798431 ~ 26801401 (+)
G23695 NA other downstream 355006 26846723 ~ 26847357 (+)
LOC122335546 NA other downstream 790110 27281827 ~ 27282406 (+)

Expression


Co-expression Network