bckdhbl (LOC107731123,LOC107689045)


Basic Information

Item Value
gene id bckdhbl
gene name LOC107731123,LOC107689045
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20248076 ~ 20251489 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235298.1
TAAAGCTAGCTACGCAGTCCTAGGTCAATCACGTCTCATTTTCTTCTGAGGTTCTAGACTGAGGTATTAGGTTTAAAAGTGTTCGTTTCCGGTCACCAGACTGTGTGCACGCCAAGTTTATGTTGCTGCGTAATTTTGCGCATAATTATTTTTGGAAAGGTTTCCTCATCACCCTTACGATTTGTCGAGGTATGCGTGATGACACAGGACATGATCTCACAAGCCTGGTTATTGAGGAACTGGTTTCTAAAACGTTTTCTTTACAAGAAGTGGCCTATTCAACACATTTAATTCTAGCGTTGGGTGCATCGAAGGGATCGGGATCAGCACAAAAATGATGAAATGGAGATCGCTGTCTGCTTTGCTGTGTGTTCCGCTCTTGACTGGGTTATGTAATGGATGCCTAGCACCAGGGGGAGATTATAAATTCAGATTGCGACTGACGGAAACGCTTGTCAGCGTCAAGAGAGGACAAGCCCGGATCCCCTGCGCGTTCACTGCTCCCATGAGGGCGCTCTCCGGCCGCCAGGTCTGGTTCAGAGGCAGTCCCGAGTTCCCCCTCAGCCCCGCCGAGGCGCACAAGATGAGCGGACTCATGGGACCCAGGATCTCCACCGAGTCCGAGTGCAGCGTGGTTCTGTGGGACGCCCGGGAGACGCCCGAGGAGTACGGCTTTATGCTGGAATGGGGAGCGAACGAAAGACACGTTTTCCCCGATAGGGTTAAAGTGGTCTCGTGCGTCGCGAAAGTGGAGTTGACTCCAAGCACTTACGCCAAGGACCTTTTGGCTGGAGAAGAGACTGTTTTCAAATGTAGCCTTTCAAATCACTGCCCTGGCATTGATCCAAAAATAACCTGGAAAGGGCTCAGCTCAACACAAGTAATACAACAatctaaaaaagaaatgcttgaAAATTCGGGATACTCTGAACAGCTCCTGTATGTCCCCTTGCCCGAGGATCACCAAGCAGAGATCACGTGTGAAGCTACGTTTGGGAAAAATCTAAGTGCAAGTGCTAAAACAATGTTGACGGTCCACTCTCATCCTCAGATACTGAACAGCTCTGCATGCTCCCTGCAGCAGGATCAGCTCACTTGTGTGTGCGTCAGTCAGGGAGTGCCCTTGCCCGATATTCACTGGCCTCTGCTTCCAAGCAAACACTATTTCACTAAAGCCAGAGCATCGCACATCACTGTAAGAAGCACCTTCACAATGACCGTTGTGAAGTTCACAAGTAACAGCACCGTCACGTGTGTCAGCAGAAACTACCTTGGTCAGACAAACATGACTCTTCCAGTCAACATCACTGAAGGTCTTAGAAACGCATATAGGTGGACAATCAAAGGGCTGGCGATTGCATTATTCATTACACTGACATTCTGTGCAATTTGTTTTTGGATAAAAGCAAAATCCAAGAAACTACAAGAGGCACACTACAGCACACTGGAAGAGGGAGcagaaaatgacatgaaaaCACAAGATTGGACTGGTTTCACGGAGTAGCATTTATACTAATAACTTTCAGAGATCTGTTCAACTCAGATGAACATGGCACTGAAATTCCTGAATTAGCTTAGTtccataaatatttacaatggTCATGAACTCCTGGTATTTTCAGtctacctttttttaaatgactaacGCCATTCTGTGGATGGGgagacatgtaaaaaaaaaaaaaaaaaagtcagaggCAGTAGTGCTGTATAAAATTTGCTGTAACAATTCTAATGCTAAAATTGTGTTCCTTTCAGAGTGTTGCGAGACTAATTTCTAAAGCTTCGTATCTTGTGTTGACCCCTCTGTATGCATATAAATCCATAAACACTCTGGAGGCCAAAAA
>XM_043235299.1
AGCTAGCTACGCAGTCCTAGGTCAATCACGTCTCATTTTCTTCTGAGGTTCTAGACTGAGGTATTAGGTTTAAAAGTGTTCGTTTCCGGTCACCAGACTGTGTGCACGCCAAGTTTATGTTGCTGCGTAATTTTGCGCATAATTATTTTTGGAAAGGTTTCCTCATCACCCTTACGATTTGTCGAGGTATGCGTGATGACACAGGACATGATCTCACAAGCCTGGTTATTGAGGAACTGGTTTCTAAAACGTTTTCTTTACAAGAAGTGGCCTATTCAACACATTTAATTCTAGCGTTGGGTGCATCGAAGGGATCGGGATCAGCACAAAAATGATGAAATGGAGATCGCTGTCTGCTTTGCTGTGTGTTCCGCTCTTGACTGGGTTATGTAATGGATGCCTAGCACCAGGGGGAGATTATAAATTCAGATTGCGACTGACGGAAACGCTTGTCAGCGTCAAGAGAGGACAAGCCCGGATCCCCTGCGCGTTCACTGCTCCCATGAGGGCGCTCTCCGGCCGCCAGGTCTGGTTCAGAGGCAGTCCCGAGTTCCCCCTCAGCCCCGCCGAGGCGCACAAGATGAGCGGACTCATGGGACCCAGGATCTCCACCGAGTCCGAGTGCAGCGTGGTTCTGTGGGACGCCCGGGAGACGCCCGAGGAGTACGGCTTTATGCTGGAATGGGGAGCGAACGAAAGACACGTTTTCCCCGATAGGGTTAAAGTGGTCTCGTGCGTCGCGAAAGTGGAGTTGACTCCAAGCACTTACGCCAAGGACCTTTTGGCTGGAGAAGAGACTGTTTTCAAATGTAGCCTTTCAAATCACTGCCCTGGCATTGATCCAAAAATAACCTGGAAAGGGCTCAGCTCAACACAAGTAATACAACAatctaaaaaagaaatgcttgaAAATTCGGGATACTCTGAACAGCTCCTGTATGTCCCCTTGCCCGAGGATCACCAAGCAGAGATCACGTGTGAAGCTACGTTTGGGAAAAATCTAAGTGCAAGTGCTAAAACAATGTTGACGGTCCACTCTCATCCTCAGATACTGAACAGCTCTGCATGCTCCCTGCAGCAGGATCAGCTCACTTGTGTGTGCGTCAGTCAGGGAGTGCCCTTGCCCGATATTCACTGGCCTCTGCTTCCAAGCAAACACTATTTCACTAAAGCCAGAGCATCGCACATCACTGTAAGAAGCACCTTCACAATGACCGTTGTGAAGTTCACAAGTAACAGCACCGTCACGTGTGTCAGCAGAAACTACCTTGGTCAGACAAACATGACTCTTCCAGTCAACATCACTGAAGGATAAAAGCAAAATCCAAGAAACTACAAGAGGCACACTACAGCACACTGGAAGAGGGAGcagaaaatgacatgaaaaCACAAGATTGGACTGGTTTCACGGAGTAGCATTTATACTAATAACTTTCAGAGATCTGTTCAACTCAGATGAACATGGCACTGAAATTCCTGAATTAGCTTAGTtccataaatatttacaatggTCATGAACTCCTGGTATTTTCAGtctacctttttttaaatgactaacGCCATTCTGTGGATGGGgagacatgtaaaaaaaaaaaaaaaaaagtcagaggCAGTAGTGCTGTATAAAATTTGCTGTAACAATTCTAATGCTAAAATTGTGTTCCTTTCAGAGTGTTGCGAGACTAATTTCTAAAGCTTCGTATCTTGTGTTGACCCCTCTGTATGCATATAAATCCATAAACACTCTGGAGGCCAAAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107731123 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235298.1 True 1847 mRNA 0.46 7 20248076 20251489
XM_043235299.1 False 1759 mRNA 0.46 6 20248079 20251489

Neighbor

gene id symbol gene type direction distance location
gjc1 LOC107653474,LOC107731105,LOC107570945,LOC107567456,LOC107754260,LOC107690314,LOC564307 coding upstream 18406 20201276 ~ 20229670 (+)
LOC122341342 LOC107754194,LOC107690309,LOC107731071,LOC107653446,LOC107570938 coding upstream 87895 20148514 ~ 20160181 (+)
LOC122341340 NA coding upstream 166031 20077002 ~ 20082045 (+)
LOC122341339 LOC107754194,LOC107568235 coding upstream 171075 20071944 ~ 20077001 (+)
LOC122341548 cacnb1,LOC107670911,LOC107689043,LOC108413880 coding upstream 226336 20010133 ~ 20021740 (+)
cacnb1 cacnb1,LOC106607253,LOC108413880,LOC107670911,LOC107689043,LOC107552492 coding downstream 3335 20254824 ~ 20284900 (+)
arl5c arl5c,LOC107670909,LOC107754318,LOC107567387,LOC107745936,LOC107689047,LOC108260527 coding downstream 35674 20287163 ~ 20290477 (+)
lasp1 LOC107754308,LOC107745925,LOC107552489,LOC107689048,LOC107567378,LOC108413872,LOC108258608,LOC107670908 coding downstream 44983 20296472 ~ 20309460 (+)
trnac-gca_3 NA coding downstream 62771 20314260 ~ 20314331 (+)
atp6v0ca LOC107754334,LOC107567372,LOC107552490,LOC107745898 coding downstream 64829 20316318 ~ 20320290 (+)
LOC122342124 NA non-coding upstream 62550 20173694 ~ 20185526 (+)
G21652 NA non-coding upstream 75074 20168636 ~ 20173002 (+)
LOC122341550 LOC107754194,LOC107690309,LOC107568235 non-coding upstream 86865 20160436 ~ 20161211 (+)
G21558 LOC107560741,LOC107567502,LOC107754185,LOC107731050,LOC107690308,LOC107653427 non-coding upstream 277657 19954076 ~ 19970419 (+)
G21586 LOC107578035,LOC107731050,LOC107690308,LOC107560752,LOC107560741,LOC107653427,LOC107754185 non-coding upstream 296145 19928729 ~ 19951931 (+)
G21660 NA non-coding downstream 88402 20339891 ~ 20345356 (+)
G21661 NA non-coding downstream 89583 20341072 ~ 20342296 (+)
G21669 NA non-coding downstream 142072 20393561 ~ 20393901 (+)
G21671 NA non-coding downstream 156303 20407792 ~ 20408327 (+)
G21687 NA non-coding downstream 228842 20480331 ~ 20518038 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 52355 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 134578 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 178823 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 844900 19399408 ~ 19403176 (+)
G21213 NA other upstream 955735 19291445 ~ 19292341 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 630709 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 1044213 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 1386254 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 1723763 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 1725020 21976509 ~ 22025911 (+)

Expression


Co-expression Network