fus (fus,LOC107658502,LOC107554122,LOC103040960)


Basic Information

Item Value
gene id fus
gene name fus,LOC107658502,LOC107554122,LOC103040960
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12183251 ~ 12192143 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235340.1
GACATCACCGGGGCAGCTCACAGGCTCAAACCGACACAACAGCGTCAGCCTCCGCACGGTTGCGCAGTTAATATCGGTAACCGAGGGTGACTGTGCACCACTGCGCTAACTGGTCTTCTGCAGTAGCTTCTGAAACGATCTCAATCGCGATTATGGCGTCAAATGATTATGCCCAAACCTCAAGCCATGGTTATGGTAGTTATGGAGGACAGTCCAACCAGAGTTACAGTCAACCCTCCGGACAAAATTACAGCCAGCAGAGCTATGGAGGATACAACCAAAACTCAGAGAGCAGCTCTGCCTATAATCAGGGTGGATACAGTTCCAGCTACGGACAGTCCCAATCAGGAGGATATGGGTCTCAGCCCCCCTCTCAGGGCTATAATCAGTCCAGTCAGTCATACAGCTCTGGAGGCTacagtagcagcagcagcagcagcagccagcCTCCACCAGCTCAAAGTGGAGGCTACAACCAGCAATCCTCTTATTCCAGCTATAACCAGCATCAGTCTGGTCCTCCATCTGCCTCTGGCAACTACGGCAGCAGCCCGCAGTCATCTGGCTATggtcagcagcagcagcagcagcagggtGGGGGTGCATATGGTGGCAGTGGGGGTCAGTCTGGAGGATACGGGGGCAGCGGAGGACAGAGCGGTGGATATGGGGGTAGCTCCGGGCAACACCAGTCCTCTCAGCATGGAGGAGGGCCTTACAACCAATCTCCCAACTACAGCTCTCCTCCACCTCAAAACTATGGCCAACAAAATCAGTATGGACAGGGAGGCTACAGCCAGGATGCCCCACCAATGagtggtggtggtggaggaggCTATGGTGGCCAGGATGGTGGATACAGCCAGGATGGCAGAGGTGGACGTGGTCGTGGAGGTGGCTTTGGAGGTCGAGGAGCGGGTGGGTTTGACAGAGGTGGTCGTGGAGGTCCCCGTGGCAGAGGAGGAATGGGAATGGGTGATCGTGGAGGATTCAATAAGTTTGGTGgGCCCAGGGATCATCTAGCTGGTGGGCCCAATAtgcaggaGCAGGATAACTCTGACAACAACACCATCTTTGTGCAAGGTCTTGGAGACAACTATACCGTGGAGTCAGTAGCAGATTTCTTCAAACAGATCGGCATCATCAAGgtcaataaaaaaacaggatTACCCATGATAAATCTGTATACCGACCGAGAGACAGGGAAGCTTAAAGGGGAGGCAACTGTTTCCTTTGATGACCCTCCTTCTGCAAAAGCAGCCATTGATTGGTTTGATGGCAAGGATTTTAATGGAAATCCTATCAAGGTGTCCTTTGCTACTCGCAGAGCTGAATTTGGACGTGGCGGTGGCAGCATGAGAGGTGGTCGTGGTCGAGGAGGACCAATGGGCCGTGGAGGATTTGGGGGTGGAAGAGGGGGTGGCGGTGGCGGCGGTTTCCCAGGAAACAATGGTGGCGGCGGCGGTGGCGGTGGTGGTGGCAGCGCCGGTCAGCAAAGAGCAGGAGACTGGAAATGTTCAAACCCAACTTGTGGTAATTTGAATTTCTCATGGCGAAATGAGTGTAATCAGTGCAAAGCTCCCAAACCGGAGGGAAGTGGGGGAGGAATGTCACCAATGGGAGGAGGCTTTGCTGGAGACAGGGGCAGAGGCGGATTTGAACGAGGTGGTTTTCGCGGACGCGGTGGCGATCGAGGGGGCTTCAGAGGAGGGAGGGGAGGTGACCGGGGAGGATTTGGACCCGGCAAGATGGACTCGAGGGGTGACCACAGGCATGACCGCAGAGACCGGCCTTACTAATGGAAGAAACTTTCTTCTGTCCAAATAAGACTTTAATTCGATGTGGGACCAGTATTCACTCCACTTCAACATGTATTACCTTGTCGCTCATGTTTTGTGTTGTATGTTgtcaaaatgtttctgttttagttctgataatattattttcttgtattattttctatatattctGATATATAGATAATGAATTTTGCGTTTTTCCTCTGAATTTTTCTGGTGTTTAGGTCATCGCTATTTgtgcaatttattaaatgtacttttaatttttttttttctgtaaactgtggtttaaaattaaaaatgtttgaaagta

Function

symbol description
fus Predicted to enable RNA binding activity and transcription coregulator activity. Acts upstream of or within axon extension. Predicted to be active in nucleus. Is expressed in gut; muscle; nervous system; and trunk. Used to study amyotrophic lateral sclerosis. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis; amyotrophic lateral sclerosis type 6; essential tremor 4; liposarcoma; and neurodegenerative disease. Orthologous to human FUS (FUS RNA binding protein).

NR:

description
RNA-binding protein FUS isoform X5

GO: NA

KEGG:

id description
K13098 TLS, FUS; RNA-binding protein FUS

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235340.1 True 2112 mRNA 0.51 15 12183251 12192143

Neighbor

gene id symbol gene type direction distance location
si:dkey-16l2.17 si:dkey-16l2.17,LOC107582999,LOC107729501,LOC107658439,LOC107737763,LOC107689709,LOC107554090 coding upstream 753 12179223 ~ 12182498 (+)
kat8 kat8,LOC107582998,LOC107658503,LOC107729500,LOC107689650,LOC107554120 coding upstream 5522 12174276 ~ 12177729 (+)
rnf25 rnf25,LOC107729499,LOC107658504,LOC107582997,LOC107689710,LOC107554089 coding upstream 9377 12168881 ~ 12173874 (+)
si:dkey-16l2.16 si:dkey-16l2.16,LOC107729502,LOC107554119,LOC107658507,LOC107730777,LOC108427354,LOC108280555 coding upstream 14520 12163610 ~ 12168731 (+)
thoc6 thoc6,LOC107729483,LOC107583000,LOC107689651,LOC107730738 coding upstream 20610 12159182 ~ 12162641 (+)
setd1a LOC107729457,LOC107658500,LOC107737760,LOC107582993,LOC107554121 coding downstream 1835 12193978 ~ 12215690 (+)
hsd3b7 hsd3b7,LOC107582995,LOC107658501,LOC107729456,LOC107737759,LOC107554123,LOC107689649 coding downstream 24468 12216611 ~ 12230379 (+)
cd2bp2 cd2bp2,LOC107582988,LOC107729467,LOC107554127,LOC107737770,LOC107683307 coding downstream 61715 12253858 ~ 12259180 (+)
prr14 LOC107729463,LOC107658509,LOC107582987 coding downstream 67333 12259476 ~ 12268093 (+)
rusf1 zgc:162613,LOC107729465,LOC107658510,LOC107737752,LOC107554129,LOC107689643 coding downstream 80497 12272640 ~ 12276359 (+)
G19274 NA non-coding upstream 48294 12132629 ~ 12134957 (+)
G19263 NA non-coding upstream 64476 12118538 ~ 12118775 (+)
G19257 NA non-coding upstream 108748 12074231 ~ 12074503 (+)
G19255 NA non-coding upstream 110178 12072719 ~ 12073073 (+)
G19208 NA non-coding upstream 209245 11967648 ~ 11974006 (+)
G19287 NA non-coding downstream 35792 12227935 ~ 12228520 (+)
G19579 NA non-coding downstream 489115 12681258 ~ 12681565 (+)
G19575 LOC107690704 non-coding downstream 490675 12682818 ~ 12686371 (+)
G19656 NA non-coding downstream 805074 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 813667 13005810 ~ 13096854 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 65312 12114048 ~ 12117939 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other upstream 82399 12092603 ~ 12100852 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other upstream 133829 12027149 ~ 12049422 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other upstream 289595 11885655 ~ 11893656 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 349327 11773200 ~ 11833924 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 40284 12232427 ~ 12249997 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other downstream 111221 12303364 ~ 12315046 (+)
G19326 NA other downstream 319783 12511926 ~ 12513721 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other downstream 327694 12519837 ~ 12528803 (+)
LOC122332158 LOC107583070,LOC107737766 other downstream 643238 12835381 ~ 12987913 (+)

Expression


Co-expression Network