si:ch73-141c7.1 (si:ch73-141c7.1,LOC107567723,LOC107590559,LOC107687003,LOC107729197,LOC107690287)


Basic Information

Item Value
gene id si:ch73-141c7.1
gene name si:ch73-141c7.1,LOC107567723,LOC107590559,LOC107687003,LOC107729197,LOC107690287
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 19451411 ~ 19454315 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235343.1
ATTCTCAGTCAATGACGCGCCAGAGAGAAACCCCTCAAGGTGAATAAGTTGACGACCGTCTGAGTACCTGTGAGAGCCGGTTCTCAGCTCCTCCCCTCGGAGCGTCACTCTACAGCTCTGCCCTTAATAGTAAAGCCACCCCGCCGTCTTTCAGTTCCAGCGGAGCCGCCGGTTATTACGGCCATCGACACGGTCATCAGTGCGCAGGGATTTTACAAGCTTCCAATAGCACAAATGGCAAAGAAGGCCACTTCGCTTTTAGTCCGGGCTCTGGAGATGTCAGAAAGACACTCGTGTGATGCCATGAGGAGAAACTCCAACTGCACCGTCAGACATTTGAGCTCATGCGGTATATTAGCTACGAGGCGGGTAAGCTTACCTTCCCCATCCGCATCTTCTCAGATGGTGCCCACCCGGAGCTTCATTAACTTGTCAGCCCCTCTCATAACACGGAGAATGGAGTACTCGGAGAGCCGGAGCATTGGCTACTCGCCAGAGCAGATGTACAACATTGTTGCCAATGTGGACCAGTACCAGCAGTTTGTGCCTTGGTGCAAGAAGTCAAAGGTAACAAGGGGGCGGAACGGGGACATGAAAGCTCAACTTGAAATCGGCTTCCCCCCGATCATTGAACGCTACACCTCCGAGGTCACAGTCATCCCGAACCACCAAGTCCGGGCGGTGTGTACAGACGGGACGCTCTTTAATCACCTTGAGACGCTGTGGCGATTTACTCCTGGAGCCGCAGGCCAAACCCAATCCTGCAACGTAGAGTTCTTTGTGTCCTTTGAATTCAAATCTCTGCTCCACTCTCAATTAGCGACAGTGTTTTTTGATGAGGTGGTCAAACAGATGGTCAATGCTTTCGAAAAGCAAGCAACCAAACTTTACGGCACCGGCATTCATCGACAGACGGCTTCACTTAGAAGAGCAACTTGAGGACCTTGTTAAAACGGACACAAGGAGATACACAACCACAtacaatcattaaaatgttctggAGAAGAACAGATCCTCTTTTTTAATCCAGTTTGTTGGATTTTGGACTGGTAACGCCAACACATAtttttgctggaaaaaaaaaaaaacacatttgaaaagcCTATTTATTTTAACCAAGAGATATAATTTATTGTGATGAGTGCGTGcgtgtataatttatatattatgcgTGGAGTGAAAGACGAAGATGATTGCAGTAAACGTTGTTGAGGATGGAtgctttttcatatttatgatCATTATATTCACAAGGTCGACCAAAGggaaacaaaatttattaaattattgagTGCACTTTTTCCAGacttgtaataaataatatattttcataa

Function

symbol description
si:ch73-141c7.1 Predicted to enable ubiquinone binding activity. Predicted to be involved in cellular respiration and ubiquinone biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in myotome; optic vesicle; and pronephric duct. Orthologous to human COQ10B (coenzyme Q10B).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005743 mitochondrial inner membrane cellular_component

KEGG:

id description
K18588 COQ10; coenzyme Q-binding protein COQ10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235343.1 True 1334 mRNA 0.46 5 19451411 19454315

Neighbor

gene id symbol gene type direction distance location
hsd17b1 hsd17b1 coding upstream 1749 19447171 ~ 19449662 (+)
LOC122341749 LOC107687002 coding upstream 5514 19443220 ~ 19445897 (+)
rabep2 LOC107690284,LOC107567756,LOC107755579,LOC107729174,LOC107687001 coding upstream 33520 19409591 ~ 19417891 (+)
si:ch211-11k18.4 si:ch211-11k18.4,ehd3,LOC107567764,LOC107755580,LOC107690281,LOC107590563,LOC107687000,LOC108411040 coding upstream 42727 19403562 ~ 19408684 (+)
gdpd3a gdpd3a,LOC107590565,LOC107686997,LOC107729175,LOC107755582 coding upstream 52139 19394731 ~ 19399272 (+)
nkiras2 nkiras2,LOC107755561,LOC107590605,LOC107687022,LOC107729182 coding downstream 54773 19509088 ~ 19511507 (+)
aspdh aspdh,LOC107754162,LOC107731187 coding downstream 463355 19917670 ~ 19921271 (+)
pold1 pold1,LOC107754155,LOC107653418,LOC107731044 coding downstream 476418 19930733 ~ 19941580 (+)
LOC122341334 LOC107754194,LOC107568235,LOC107690309 coding downstream 533191 19987506 ~ 19998472 (+)
LOC122341335 LOC107754194,LOC107568235,LOC107690309 coding downstream 544178 19998493 ~ 19999588 (+)
G21239 LOC107687002 non-coding upstream 10765 19438007 ~ 19440646 (+)
G21215 NA non-coding upstream 146353 19304852 ~ 19305058 (+)
G21151 NA non-coding upstream 163762 19258917 ~ 19287649 (+)
G21188 pigq,LOC107733876,LOC107690265,LOC107590576,LOC107568381,LOC107729199 non-coding upstream 596868 18854109 ~ 18854543 (+)
G21180 NA non-coding upstream 747728 18702584 ~ 18703683 (+)
LOC122341657 NA non-coding downstream 1111 19455426 ~ 19459635 (+)
G21269 aclya,LOC107687019,LOC107729187,LOC107590593,LOC107755575,LOC107567706,LOC107690323 non-coding downstream 16684 19470999 ~ 19472687 (+)
G21246 NA non-coding downstream 29186 19483501 ~ 19484384 (+)
G21275 NA non-coding downstream 35458 19489773 ~ 19490022 (+)
G21276 NA non-coding downstream 35814 19490129 ~ 19490595 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 48235 19399408 ~ 19403176 (+)
G21213 NA other upstream 159070 19291445 ~ 19292341 (+)
G21202 NA other upstream 458177 18991458 ~ 18993234 (+)
G21125 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693,LOC106591169,LOC106564622 other upstream 575284 18869266 ~ 18876127 (+)
LOC122341799 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693 other upstream 609651 18828665 ~ 18841760 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other downstream 609955 20064270 ~ 20069253 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other downstream 640536 20094851 ~ 20113498 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other downstream 731220 20185535 ~ 20195721 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 1427883 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 1841387 21295702 ~ 21414286 (+)

Expression


Co-expression Network