hbae3 (hbae3,LOC107674645,LOC107588003,LOC107703327)


Basic Information

Item Value
gene id hbae3
gene name hbae3,LOC107674645,LOC107588003,LOC107703327
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9808052 ~ 9809328 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235351.1
GATAGGGTTAAGGCATCTATAGCAGGTCATGCAGAGTACGCAATGTGATGGTGAGAAActggtaataaaataatacacatgttaataagcaactaattatTAGTGAATAGtgtttcataatttaatatgCTACCTTTATATCTGTTTTAATGAAGCTCGAATGGAACATTTTAATTGTCAGTTTAAAAATACCATGTAAGGAGCAATCGACCACGGGTCGTTGAATTATTAAACGAATAACGCGAGCGTGTGTTATTTTTCTTAAGAGGCGTTTTATGCAGCCTACCATCAAAAGTCGCAACCAGTTTAATACAACGTTTTTAACGGGAGTCTCGGGGAGCTCTGTAATATCTGAACGACAGATACACGAAGTATGTCTTCACGTAAACATGCAGTTAGATTCAGACTTAAACGGCTCTCTTGCTTATCAAGATTCAAGACATTTCCTCCCCAGTGCCCTGCTTGGGAGGAGGagtcaaaaaaatacaaattcaaaacaatgcCCATCTCTCCTTTAAAAGGCACTGCCAAAAAACCACAGCCAGGTTGATTTTTTTGGCAGCCTAATCTAGTCACCATGAGTCTTTCCGCAAAGGACAAACTGGCCGTGAAGACCTTCTTCGGCAAAGTCGGCGCTAAGGCGGAGGACATCGGCAGCGATGCTCTGGCCAGGACTCTGTTCGTCTACCCTCAGACGAAGACCTACTTCTCCCACTGGGCAGACCTGAGCCCCGGCTCCCCCCAGGTGAAAAAGCATGGTCTGACCGTGATGAACGGCGTCCTCAGCGCCGTGGAGCTGATCGATGATCTCAAGGGGGGTCTGCTCACCCTCAGCGAGCTTCACGCCTTCATGCTTCGCGTGGACCCCGCTAACTTCAAGATCATCAATCACAATCTCCTCGTGGTGCTCTCGCTGATGTTTCCTGAAGACTTCACTGCCGAGGTGCACGTTTCTGTGGACAAGTTCCTCGCTCAGGTCAGCCTGGCTCTGTCCGAGAAGTACAGATAAAGCCGACCCTGTGTTCATCTCCGACGCGACACTGTATTCGCCTTAACGaggatgaaaataataaaattgaatgtGTAAAATCAA

Function

symbol description
hbae3 Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to contribute to haptoglobin binding activity and peroxidase activity. Predicted to be involved in hydrogen peroxide catabolic process. Predicted to act upstream of or within oxygen transport. Predicted to be part of haptoglobin-hemoglobin complex and hemoglobin complex. Is expressed in erythroid lineage cell; hematopoietic system; mesoderm; presumptive blood; and vasculature.

NR:

description
PREDICTED: hemoglobin subunit alpha-1-like

GO:

id name namespace
GO:0015671 oxygen transport biological_process
GO:0005833 hemoglobin complex cellular_component
GO:0005506 iron ion binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0005344 oxygen carrier activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235351.1 True 1093 mRNA 0.46 3 9808052 9809328

Neighbor

gene id symbol gene type direction distance location
LOC122341755 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding downstream 5961 9801281 ~ 9802091 (-)
LOC122341747 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding downstream 9253 9797999 ~ 9798799 (-)
LOC122331237 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding downstream 12394 9794705 ~ 9795658 (-)
hbae1.1 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding downstream 15538 9791542 ~ 9792514 (-)
hbba1 ba2,ba1 coding downstream 23627 9783631 ~ 9784425 (-)
kank2 kank2,LOC107703353,LOC107674641,LOC107596805,LOC107587974,LOC107754027 coding upstream 1865 9811193 ~ 9832217 (-)
LOC122338283 LOC107754021,LOC108443460,LOC103358228,LOC100691522,LOC107587920,LOC107674652,LOC107703354 coding upstream 24342 9833670 ~ 9878577 (-)
prkcsh prkcsh,LOC107725022,LOC107754018,LOC107703311,LOC107587972 coding upstream 100648 9909976 ~ 9917069 (-)
abat abat,LOC107690246,LOC107738621,LOC107685926 coding upstream 131957 9941285 ~ 9963128 (-)
mettl22 LOC107738618,LOC107733833,LOC107590588,LOC107685927,LOC107568640,LOC107690247 coding upstream 155123 9964451 ~ 9974561 (-)
G18634 LOC107596828,LOC107588005,LOC107596825,LOC107703325,LOC107587921,LOC108440249,LOC108440213 non-coding downstream 14867 9789616 ~ 9793185 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding downstream 21928 9785249 ~ 9786124 (-)
G18623 NA non-coding downstream 54530 9753235 ~ 9753522 (-)
G18608 NA non-coding downstream 161486 9646313 ~ 9646566 (-)
G18602 NA non-coding downstream 216761 9589921 ~ 9591291 (-)
G18638 LOC107703356,LOC107674672,LOC107754020,LOC107596819 non-coding upstream 92203 9901531 ~ 9908617 (-)
G18717 NA non-coding upstream 592505 10401833 ~ 10402211 (-)
G18745 NA non-coding upstream 764839 10574167 ~ 10579140 (-)
G18771 NA non-coding upstream 868129 10677457 ~ 10678580 (-)
G18795 LOC107732905,LOC107729518,LOC107551141,LOC107551149,LOC107690331,LOC107680850,LOC107561346 non-coding upstream 879836 10689164 ~ 10697539 (-)
G18433 LOC107670519,LOC107563315 other downstream 345147 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 669963 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 800609 8992714 ~ 9007443 (-)
fmc1 NA other downstream 1409224 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 1588997 8218902 ~ 8219055 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 184505 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 584986 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 1202608 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 1602657 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 1884944 11694272 ~ 11714719 (-)

Expression


Co-expression Network