dnajb1a (dnajb1a,LOC107711204,LOC107602716,LOC107670512,LOC107728686,LOC107599305,LOC108429690,LOC108257372)


Basic Information

Item Value
gene id dnajb1a
gene name dnajb1a,LOC107711204,LOC107602716,LOC107670512,LOC107728686,LOC107599305,LOC108429690,LOC108257372
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6665977 ~ 6670009 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235363.1
GCCGCCGAGCAAGTCATTTTTCTCGGACTTTCTGCGGACGCTCGGCGACGTTGACAATTACATTACGGCGCTTTTCGCCGGGAACTCTTCGCGATATCGAAGTTTTACATCGATTAAAGTTAGAGGAGCCTCGGGAAAATGGTCGCACGTTTCAGGGACGCGGCAGTGGCTGAACGCGATCTGTGAGGATTTGGATGAATAACTTAAAAACAGTTTGTTAAACTCCATCCGCGCGCTTCATGTTCGACAGGACAGGAGGAGGATCGTTTAAAATTAATCGAGTCGTTCAGTATTTGGAGGATATCGACATATGGAAACGGGTAGTTGAACGACAGCTAGTCGAGTGTTGTGATGGGTAAAGATTATTACAGGATCCTGGGGATAGAGAAGGGCGCCTCGGATGAGGAGATCAAGAAAGCCTacagaaaacaagctttaaGGTTTCATCCCGACAAAAACAAATCGGCCGGAGCAGAGGATAAATTCAAAGAAATCGCCGAAGCTTACGATGTCCTGAGCGATGCCAAGAAGAAAGACATCTATGACAGATGTGGAGAGGATGGGCTCAAGGGACACGCCGGGGGTGGCTGCAATGGCCCTAGCTATACTTTTCACGGCGATCCTCACGCCATGTTTGCGGAGTTCTTCGCCGGCCGCAGCCCGTTCGATCAGTTTTTTGCGTCCGCCGGGGGCGCCGACGATGACATGGACATCGACGACCCCTTCGCGGCGTTCGGGATGGGAGGGATGGGCGGCTTTCCCAGGTCTTTCAAGTCTCGGGTGGGAGGCGTGCACGGGGGccgagaaaagaagaaagatccCCCGGTAGTGCACGAGCTCAAGGTGAGCCTGGAAGAGGTGTTCTCTGGTTGCACGAAAAAGATGAAGATCTCTCGCAAGAGGCTGAACCCGGACCGCTGCTCGGTGCGCACCGAAGACAAGATCCTCACTGTGGACATCAAACGAGGCTGGAAGGAGGGCACCAAGATTACCTTTCCCAAAGAGGGAGATGAGACGCCAACCAACATCCCTGCCGATATAGTATTTGTGGTTAAGGACAAGATTCACCCGGTTTTTAAGCGAGACGGCTCTGACATCATCTACCCTGCAAGGATATCCCTCCGAGAGGCTCTATGCGGCTGCACCATCAGCGCTCCCACCCTGGACGGTAGAACTGTCACCGTGACATCCCGTGATGTCATCAAACCCGGTATGAAGAAGAGGATAGTGGGAGAAGGACTGCCGCTGTCCAAATGTCCTGAAAAGAGAGGAGACATGGTGCTAGAGTTCTTGGTGAAATTTCCGGACAAGTTGGGACAGAGTGCTCGTGAATCTCTGGTTCAGATCCTACCACCTTGACTCTCAACACACAGATCCTATGATTGGGGCccttctgatttttttttttttagatctcaTTACACCTGAAAGCATCAGTGGTGAATACACAAAAGTCAAGCTCAGAGAAACGCGACAGAGCTCCCGACAGTTTATTTATACCCCCTTTACTTATATCGCAATGCACTTTTACAAAACACTGTGAAACCTCTCAGAAATAATATATTGACTTTCACACACCGTTTTTAAAGTACCTCCAAGTAAATGCTCCTTTTTGCTTCTTCGGGTTTCTTTCTCCTCTAATCTGttgatattttcttttattaaaataatattcccATTTTA

Function

symbol description
dnajb1a Predicted to enable several functions, including Hsp70 protein binding activity; chaperone binding activity; and unfolded protein binding activity. Acts upstream of or within lens development in camera-type eye. Predicted to be active in cytosol. Orthologous to human DNAJB1 (DnaJ heat shock protein family (Hsp40) member B1).

NR:

description
PREDICTED: dnaJ homolog subfamily B member 1

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09511 DNAJB5; DnaJ homolog subfamily B member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235363.1 True 1683 mRNA 0.49 3 6665977 6670009

Neighbor

gene id symbol gene type direction distance location
samd1a samd1a,LOC107728687,LOC107711202,LOC107661838,LOC107599303,LOC107670528,LOC107602714 coding upstream 9361 6649673 ~ 6656616 (+)
prkacaa prkacaa,kapca,LOC107599301,LOC107602709,LOC107670487,LOC107661836,LOC108429687,LOC105910964,LOC107378291,LOC106606839,LOC103367163,LOC107728680 coding upstream 19076 6630997 ~ 6646901 (+)
asf1ba asf1ba,LOC107599302,LOC107661845,LOC107602710,LOC108429686,LOC107728681,LOC107670488,LOC103026007 coding upstream 35540 6626367 ~ 6630437 (+)
tubb4bl zgc:153426,LOC100712088,LOC103367161,LOC103468788,LOC107711200 coding upstream 47624 6614524 ~ 6618353 (+)
LOC122341485 LOC107711141,LOC107661867,LOC107711189,LOC107602696,LOC103910319,LOC107661842,LOC107602684 coding upstream 58308 6606688 ~ 6607669 (+)
gipc1 gipc1,LOC107670535,LOC107728688,LOC107599306,LOC107661840,LOC107602717,LOC107711205 coding downstream 190 6670199 ~ 6678717 (+)
trim35-12 LOC107670464,LOC107602713,LOC107599344,LOC107728678,LOC107711176,LOC107661834 coding downstream 9172 6679181 ~ 6684198 (+)
dnm2a dnm2a,LOC107661823,LOC107602725 coding downstream 126777 6796786 ~ 6833224 (+)
tnfsf14 LOC107744984,LOC107661863,LOC107711150,LOC107602699 coding downstream 171010 6841019 ~ 6846641 (+)
ppap2d ppap2d,LOC107661820,LOC107711217,LOC107602726,LOC107744960,LOC107670514,LOC107599313 coding downstream 192400 6862409 ~ 6888805 (+)
G17630 NA non-coding upstream 40681 6623688 ~ 6625296 (+)
G17584 NA non-coding upstream 190358 6475099 ~ 6475619 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding upstream 229009 6436732 ~ 6436968 (+)
G17524 NA non-coding upstream 247614 6417662 ~ 6418363 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding upstream 312152 6346536 ~ 6353825 (+)
G17662 NA non-coding downstream 34405 6704414 ~ 6704702 (+)
G17663 NA non-coding downstream 35186 6705195 ~ 6705405 (+)
G17683 NA non-coding downstream 176929 6846938 ~ 6847606 (+)
G17699 NA non-coding downstream 232737 6902746 ~ 6903161 (+)
G17704 NA non-coding downstream 252187 6922196 ~ 6976265 (+)
G17590 NA other upstream 109227 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 470939 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 562351 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 703089 5957403 ~ 5962888 (+)
G17302 NA other upstream 1067745 5597099 ~ 5598232 (+)
LOC122331592 LOC107744988 other downstream 913345 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 986022 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1138234 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1168947 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 1279752 7949761 ~ 7950417 (+)

Expression


Co-expression Network