nme4 (nme4,LOC107715653,LOC107695718,LOC107718576,LOC107661657,LOC107553633)


Basic Information

Item Value
gene id nme4
gene name nme4,LOC107715653,LOC107695718,LOC107718576,LOC107661657,LOC107553633
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4987440 ~ 4991394 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235385.1
GCTATGATTGGACGCGTGACTTTGACCTGTCAGGTGAACGACCGCGCGCCCGCGTGCCTAACGGTCCCGGGGGTTAAAAGCGTCGGGGGCCGCTCGTAAGCTTTGGAGCGGTGAAAGCGCCACTCGGTGAAGTTTTCGGACACGTCTGACCtgggaaatgaaaatgatgGCCGCGCGGTTTGCGCTGTGCGTGCGCGTCGCGCGAGCGGCCAGAGCGAGCTCCACGCGCGTTTTGGGACTGGGACTCGCGCGCAGCCTCAGCAGTGACTCAGATTTTTCCGGCGTCGGAGAACGGACTCTGGTAGCCGTGAAGCCCGACGGCGTTCAGAGGCGTCTGATCGGCGAGATCATAAAGCGCTTCGAGCAGCGAGGATTCCGATTGGTCGGCCTGAAGATGCTGCAGgcTTCTGACAAGCTTTTAGCTCAGCATTACGTCTCACTGCAGAGGAAACCCTTCTACTCCAGCCTGCTCTACTACATGACCTCAGGCCCCATAGTCGCCATGGTGTGGGAGGGGCATAATGTAGTGAGGTCATCACGTAAACTGGTGGGAGACACGGACCCCGCCGAAGCCGCTCCGGGAACTATTAGAGGAGACTTCAGCGTTCACATCAGCAGAAATGTCATCCACGCATCCGATTCAGTGGAGGGGGCGGAGCGGGAGATCTCCCTCTGGTTTCATCGCTCGGAGCTCATCGACTGGGAGGGATGCGATCACAAAAACGTTTATCACATGTGAGTGTCGGTTTGAGACGTCTGTGCGTTGAACGGACTCTGCTCAATTTCCGTAATAGCAGAGGATGCTAATTACATGCAGTTTTTGGACCGCGAATGAgatgttgtcattttaaaacgATCCGATGTAAATAGATTGAAATGTtctattttattagaaatatttaagaaatgcaaagaccttttggagaaaatgtttacaaaaggTGCCCTTGAATAATAgacttttaatttagctttcGACGCACAAGTCTTAATGGTTCCTAATTGTTccttaaaagctatttttgttttatttctacgGTGCTGATCAATATAACGAACTAAACGATGTACTTTAATACTGTCTcttttaatactaataaaaaaaaataaacatttttatcagaTGCTTGTCATCCAAACCCAGTCCCTTCACTCgggaaaatgcattaaatatgcagtaaataattaataataatattgttaatttaattaaacgtGACAAAGGTGCATCAAATAAATGTCTGCTGCAACACAAA

Function

symbol description
nme4 Predicted to enable nucleoside diphosphate kinase activity. Predicted to act upstream of or within nucleotide metabolic process. Is expressed in several structures, including axis; endoderm; gonad; pigment cell; and retina. Orthologous to human NME4 (NME/NM23 nucleoside diphosphate kinase 4).

NR:

description
nucleoside diphosphate kinase

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235385.1 True 1256 mRNA 0.48 5 4987440 4991394

Neighbor

gene id symbol gene type direction distance location
xpo6 xpo6,LOC107715628,LOC107718574 coding upstream 3702 4963561 ~ 4983738 (+)
antkmt fam173a,LOC107553674 coding upstream 25460 4958012 ~ 4961980 (+)
si:dkey-282h22.5 NA coding upstream 29581 4952501 ~ 4957859 (+)
LOC122341982 zgc:112320,pde6g,LOC107718621,LOC107660259,LOC107661785,LOC107553649 coding upstream 50700 4908351 ~ 4936740 (+)
LOC122341832 NA coding upstream 92833 4892115 ~ 4894607 (+)
gadd45gip1 LOC107553677,LOC107661658,LOC107735399,LOC107715629,LOC107550245 coding downstream 248179 5239573 ~ 5241326 (+)
swsap1 LOC107550247 coding downstream 288785 5280179 ~ 5282321 (+)
LOC122341561 LOC107711124,LOC107659564,LOC107550256,LOC107718588,LOC107656793,LOC107579440 coding downstream 418205 5409599 ~ 5413133 (+)
LOC122331179 LOC107550260,LOC107659569 coding downstream 559802 5551196 ~ 5556139 (+)
LOC122331145 NA coding downstream 575171 5566565 ~ 5574214 (+)
LOC122341984 NA non-coding upstream 72947 4912694 ~ 4914493 (+)
LOC122333539 NA non-coding upstream 84161 4898839 ~ 4903279 (+)
G17018 LOC107715650,LOC107550229 non-coding upstream 120122 4865208 ~ 4867318 (+)
G17003 NA non-coding upstream 193406 4792546 ~ 4794034 (+)
LOC122341099 NA non-coding upstream 338269 4647091 ~ 4649171 (+)
G17026 NA non-coding downstream 602 4991996 ~ 5035379 (+)
LOC122341773 NA non-coding downstream 215850 5207244 ~ 5211693 (+)
G17059 NA non-coding downstream 217262 5208656 ~ 5208867 (+)
G17061 NA non-coding downstream 228256 5219650 ~ 5220372 (+)
G17056 NA non-coding downstream 263106 5254500 ~ 5257752 (+)
G16981 NA other upstream 80474 4905656 ~ 4906966 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other upstream 440873 4470732 ~ 4546567 (+)
G16979 NA other upstream 525166 4458698 ~ 4462274 (+)
G16955 crebbp,LOC108440697 other upstream 549239 4437288 ~ 4438201 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other upstream 582056 4357032 ~ 4405384 (+)
elof1 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058,LOC103384163 other downstream 319099 5310493 ~ 5312371 (+)
nfil3-2 nfil3-2,LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 other downstream 424364 5415758 ~ 5480607 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other downstream 565614 5557008 ~ 5565974 (+)
G17302 NA other downstream 605705 5597099 ~ 5598232 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other downstream 966009 5957403 ~ 5962888 (+)

Expression


Co-expression Network