LOC122341789


Basic Information

Item Value
gene id LOC122341789
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 25844687 ~ 25845748 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235415.1
ACAGTTTTAAACAGGTTTCTACAGCAGCACCAAGGTAGATTTaactctgtgtgttttgttgtttgtaccATCTGACACAGTAATTCTGTGAGGTTTCTAGCAGATCACTGAGAGATCAGAGGATGACGGTTCAAGTGTACTGCTTGCTGACTGctgttttgtgtctgtctgtgtatttgAGCACAACAGATGCTGCTCAAAGTCAAACAGTAAAACCAGGAGCGTGTCCACCTGAGAATCTTGTAGGAGGGTTATGTACCAAGACCTGTGCTGTTGATGCCAAGTGTCCGGGCACTGACAAGTGCTGCAGCAATGGATGTGGACGTCACTGTATGCCTCCCTATATAGTGAAGCCAGGTCGGTGTCCCAAACCAGAGAAGGTTTCACCAAGTGTCCAAGGCTGTACCTATGATGGTCAGTGTGCTTCCACACTGAAGTGTTGCCCAGCCAGCAGTGCCCAAGCATGTGCCGAACCGCATGGACATGGGAAGGGAAGGGACAAGAAAATGACTGAACTGTTTCAAAGGCCTGATTGCTTCTGTGGTGACAAAATAAATGGCTCTGTACAACTCTGGTTGTGGTTGATTTGCGTTTAGGCCATGTATTCTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235415.1 True 611 mRNA 0.47 3 25844687 25845748

Neighbor

gene id symbol gene type direction distance location
LOC122332877 NA coding upstream 4086 25837186 ~ 25840601 (+)
LOC122341871 rcvrna,LOC107690016,LOC107555668,LOC107755173,LOC107583783,LOC107725264 coding upstream 121941 25720847 ~ 25722746 (+)
LOC122341380 NA coding upstream 137540 25706651 ~ 25707147 (+)
LOC122341888 NA coding upstream 138469 25704655 ~ 25706218 (+)
LOC122336602 LOC107690031 coding upstream 145582 25696871 ~ 25699105 (+)
LOC122342152 NA coding downstream 3810 25849558 ~ 25850619 (+)
LOC122342114 tbl3,LOC107724722 coding downstream 11125 25856873 ~ 25871422 (+)
noxo1a noxo1,LOC107690034,LOC107724744,LOC107559526,LOC107691242,LOC107713950 coding downstream 113765 25959513 ~ 25963209 (+)
LOC122341386 NA coding downstream 140530 25986278 ~ 25988109 (+)
LOC122341388 tom1l2 coding downstream 178469 26024217 ~ 26038893 (+)
G23151 NA non-coding upstream 9546 25834383 ~ 25835141 (+)
G23149 NA non-coding upstream 14243 25828964 ~ 25830444 (+)
G23142 NA non-coding upstream 57664 25779416 ~ 25787023 (+)
G23139 NA non-coding upstream 69540 25769381 ~ 25775147 (+)
G23135 NA non-coding upstream 149819 25694486 ~ 25694868 (+)
G23152 NA non-coding downstream 1361 25847109 ~ 25853243 (+)
G23160 NA non-coding downstream 28566 25874314 ~ 25877151 (+)
G23170 NA non-coding downstream 101338 25947086 ~ 25947832 (+)
G23176 NA non-coding downstream 213604 26059352 ~ 26072689 (+)
G23189 NA non-coding downstream 285854 26131602 ~ 26133830 (+)
LOC122341783 arl16,LOC107583744 other upstream 10489 25832505 ~ 25834198 (+)
G23121 rsad1,LOC107755174,LOC107690008,LOC107670671 other upstream 182370 25661048 ~ 25662317 (+)
LOC122336634 NA other upstream 228782 25613159 ~ 25615905 (+)
LOC122331665 rsad1,LOC107690008,LOC107755174 other upstream 267644 25573757 ~ 25577043 (+)
tob1a tob1a,LOC107690006,LOC107758110,LOC107555665,LOC107583660,LOC107728672,LOC107670673 other upstream 275284 25524309 ~ 25569403 (+)
LOC122341383 tom1l2 other downstream 48842 25894590 ~ 25911625 (+)
LOC122341778 gid4,LOC107724729,LOC107555661,LOC107713949,LOC107559524,LOC106601817,LOC101065567 other downstream 102306 25948054 ~ 25952747 (+)
pitpnc1a pitpnc1,LOC107665814,LOC107691236,LOC107752702,LOC107743029,LOC108412868,LOC108274028,LOC107376579,LOC106903613 other downstream 805081 26650829 ~ 26705731 (+)
ubald2 ubald2,LOC107548684 other downstream 913315 26759063 ~ 26772903 (+)
srsf2b srsf2b,srsf2,LOC104923358,LOC107755521,LOC108430244 other downstream 952683 26798431 ~ 26801401 (+)

Expression


Co-expression Network